RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ATP13A4Q4VNC1 1196 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 KRBOX4Q5JUW0 171 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 AKNAD1Q5T1N1 836 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 CYB5RLQ6IPT4 315 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 AGMOQ6ZNB7 445 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 TUBA1AQ71U36 451 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 ARMC9Q7Z3E5 817 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 RPAP2Q8IXW5 612 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-203ENST00000414174 NIM1KQ8IY84 436 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 FAM186BQ8IYM0 893 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 TMEM57Q8N5G2 664 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 IPMKQ8NFU5 416 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 RIN3Q8TB24 985 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 ADAMTS18Q8TE60 1221 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 KCTD13Q8WZ19 329 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 TTC17Q96AE7 1141 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 ELMO3Q96BJ8 720 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 CCDC120Q96HB5 630 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 CEP295NLQ96MC4 621 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 KCNC2Q96PR1 638 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 MPHOSPH8Q99549 860 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 RHOXF2Q9BQY4 288 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 WNT10AQ9GZT5 417 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 KIAA1683Q9H0B3 1180 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 MROH8Q9H579 483 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 RABEP2Q9H5N1 569 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 INCENPQ9NQS7 918 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 C19orf73Q9NVV2 129 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 RRN3Q9NYV6 651 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 ZNF624Q9P2J8 865 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-203ENST00000414174 PRKAG3Q9UGI9 489 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 SH3BGRL2Q9UJC5 107 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 CCPG1Q9ULG6 757 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 RIMKLBQ9ULI2 386 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 SNX8Q9Y5X2 465 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 SCRIBQ14160 1630 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 SMARCA2P51531 1590 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 KDRP35968 1356 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.01□□□□□ -1.77
SF3B1-203ENST00000414174 CCDC180Q9P1Z9 1646 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 GIMAP1-GIMAP5A0A087WTJ2 511 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 CLRN2A0PK11 232 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 CCDC69A6NI79 296 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 PI4K2BG5E9Z4 385 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 M0R3H8 397 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 EYA2O00167 538 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 DYNC1I1O14576 645 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 PDPK1O15530 556 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 PDE8AO60658 829 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 RTN2O75298 545 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 SLITRK3O94933 977 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 EYA4O95677 639 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 OLFM2O95897 454 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 DNTTP04053 509 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 TNNT1P13805 278 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 BMP7P18075 431 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 TPP2P29144 1249 aaPredicted RBP4□□□□□ -1.77
SF3B1-203ENST00000414174 GRK4P32298 578 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 CSTF2P33240 577 aaKnown RBP eCLIP4□□□□□ -1.77
SF3B1-203ENST00000414174 EPS15P42566 896 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 ETV1P50549 477 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 AK2P54819 239 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 HDAC4P56524 1084 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 RPS26P62854 115 aaKnown RBP4□□□□□ -1.77
SF3B1-203ENST00000414174 KRTAP1-1Q07627 177 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 ADCY1Q08828 1119 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 ITKQ08881 620 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 FAPQ12884 760 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 GALEQ14376 348 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 CCDC85BQ15834 202 aaPredicted RBP4□□□□□ -1.77
SF3B1-203ENST00000414174 MINDY4Q4G0A6 757 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 TTC39AQ5SRH9 613 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 FKBP15Q5T1M5 1219 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 EMC10Q5UCC4 262 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 KAZNQ674X7 775 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 ITPRIPL1Q6GPH6 555 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 LIN54Q6MZP7 749 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 MFSD6Q6ZSS7 791 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 PRRT2Q7Z6L0 340 aaPredicted RBP4□□□□□ -1.77
SF3B1-203ENST00000414174 SPATA24Q86W54 205 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 VSIG1Q86XK7 387 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 LRRC71Q8N4P6 559 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 TTC39CQ8N584 583 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 ESX1Q8N693 406 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 TRIML2Q8N7C3 387 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 PCSK9Q8NBP7 692 aaKnown RBP4□□□□□ -1.77
SF3B1-203ENST00000414174 PPP1R14CQ8TAE6 165 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 ZNF507Q8TCN5 953 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 DENND1AQ8TEH3 1009 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 CCT6BQ92526 530 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 ANKRD7Q92527 254 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 FATE1Q969F0 183 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 KIF1BPQ96EK5 621 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 GIMAP5Q96F15 307 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 COG3Q96JB2 828 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 RADILQ96JH8 1075 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 BARD1Q99728 777 aaKnown RBP4□□□□□ -1.77
SF3B1-203ENST00000414174 NTPCRQ9BSD7 190 aaKnown RBP4□□□□□ -1.77
SF3B1-203ENST00000414174 YIPF4Q9BSR8 244 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 DESI2Q9BSY9 194 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms