RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 COLEC11Q9BWP8 271 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 APOL5Q9BWW9 433 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 TRIM6Q9C030 488 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-210ENST00000409954 TMEM60Q9H2L4 133 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 SH2B1Q9NRF2 756 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-210ENST00000409954 MRPL17Q9NRX2 175 aaKnown RBP16.11■□□□□ 0.17
MCF2L-210ENST00000409954 DPP7Q9UHL4 492 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 PLXNA4Q9HCM2 1894 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 ARL5CA6NH57 179 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 LILRB3O75022 631 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 ARF4P18085 180 aaPredicted RBP16.1■□□□□ 0.17
MCF2L-210ENST00000409954 RPA1P27694 616 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 TRAPPC10P48553 1259 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 AFF1P51825 1210 aaKnown RBP16.1■□□□□ 0.17
MCF2L-210ENST00000409954 FOSBP53539 338 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 CAPSQ13938 189 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 PTPN14Q15678 1187 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 AMHR2Q16671 573 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 CABP7Q86V35 215 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 CCDC83Q8IWF9 413 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 COLGALT2Q8IYK4 626 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 FAM184AQ8NB25 1140 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 ASAP3Q8TDY4 903 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 BCL7CQ8WUZ0 217 aaPredicted RBP16.1■□□□□ 0.17
MCF2L-210ENST00000409954 AUTS2Q8WXX7 1259 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 CPB2Q96IY4 423 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 PRIMPOLQ96LW4 560 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 KLHL5Q96PQ7 755 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 PRRX2Q99811 253 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 EIF2AQ9BY44 585 aaKnown RBP16.1■□□□□ 0.17
MCF2L-210ENST00000409954 RNF39Q9H2S5 420 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 USTQ9Y2C2 406 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 STK24Q9Y6E0 443 aa16.1■□□□□ 0.17
MCF2L-210ENST00000409954 POTEMA6NI47 508 aa16.09■□□□□ 0.17
MCF2L-210ENST00000409954 WNT7AO00755 349 aa16.09■□□□□ 0.17
MCF2L-210ENST00000409954 C1RP00736 705 aa16.09■□□□□ 0.17
MCF2L-210ENST00000409954 SOD2P04179 222 aa16.09■□□□□ 0.17
MCF2L-210ENST00000409954 OR1G1P47890 313 aa16.09■□□□□ 0.17
MCF2L-210ENST00000409954 GUCY1B3Q02153 619 aa16.09■□□□□ 0.17
MCF2L-210ENST00000409954 GNL2Q13823 731 aaKnown RBP16.09■□□□□ 0.17
MCF2L-210ENST00000409954 PDIA5Q14554 519 aa16.09■□□□□ 0.17
MCF2L-210ENST00000409954 ZNF174Q15697 407 aa16.09■□□□□ 0.17
MCF2L-210ENST00000409954 PTPN21Q16825 1174 aa16.09■□□□□ 0.17
MCF2L-210ENST00000409954 SLC27A1Q6PCB7 646 aa16.09■□□□□ 0.17
MCF2L-210ENST00000409954 ELMSAN1Q6PJG2 1045 aa16.09■□□□□ 0.17
MCF2L-210ENST00000409954 ZBTB33Q86T24 672 aa16.09■□□□□ 0.17
MCF2L-210ENST00000409954 GPR65Q8IYL9 337 aa16.09■□□□□ 0.17
MCF2L-210ENST00000409954 GAD1Q99259 594 aa16.09■□□□□ 0.17
MCF2L-210ENST00000409954 POLR3FQ9H1D9 316 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-210ENST00000409954 PRMT7Q9NVM4 692 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-210ENST00000409954 ATG2AQ2TAZ0 1938 aa16.09■□□□□ 0.17
MCF2L-210ENST00000409954 A0A087WWV3 80 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 USO1O60763 962 aaKnown RBP16.08■□□□□ 0.16
MCF2L-210ENST00000409954 CNPP09543 421 aaKnown RBP16.08■□□□□ 0.16
MCF2L-210ENST00000409954 OR52Z1P0C646 297 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 EPCAMP16422 314 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 CYP11B2P19099 503 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 DSC1Q08554 894 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 ST3GAL1Q11201 340 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 FAM187BQ17R55 369 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 RARS2Q5T160 578 aaKnown RBP16.08■□□□□ 0.16
MCF2L-210ENST00000409954 KIAA1841Q6NSI8 718 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 CYP26C1Q6V0L0 522 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 PPP4R3CPQ6ZMV5 832 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 MAEAQ7L5Y9 396 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 ZBTB8OSQ8IWT0 167 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 SUGP1Q8IWZ8 645 aaKnown RBP16.08■□□□□ 0.16
MCF2L-210ENST00000409954 UBALD2Q8IYN6 164 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 ZDHHC14Q8IZN3 488 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 FBXL6Q8N531 539 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 FBXL18Q96ME1 805 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 VN1R3Q9BXE9 311 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 C2orf40Q9H1Z8 148 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 FZD8Q9H461 694 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 POMKQ9H5K3 350 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 MIOSQ9NXC5 875 aa16.08■□□□□ 0.16
MCF2L-210ENST00000409954 NOL7Q9UMY1 257 aaKnown RBP16.08■□□□□ 0.16
MCF2L-210ENST00000409954 LRRIQ4A6NIV6 560 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 B4GALT3O60512 393 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 MED24O75448 989 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 URODP06132 367 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 MLH1P40692 756 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 CLCN4P51793 760 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 PPP2R5AQ15172 486 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 TTC38Q5R3I4 469 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 KIAA0319Q5VV43 1072 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 HAUS3Q68CZ6 603 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 GPR149Q86SP6 731 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 NOSTRINQ8IVI9 506 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 C12orf76Q8N812 135 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-210ENST00000409954 HDAC7Q8WUI4 952 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 RPS6KC1Q96S38 1066 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 SFXN1Q9H9B4 322 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 TSHZ2Q9NRE2 1034 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 SORCS3Q9UPU3 1222 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 HES2Q9Y543 173 aa16.07■□□□□ 0.16
MCF2L-210ENST00000409954 ZMYM2Q9UBW7 1377 aa16.06■□□□□ 0.16
MCF2L-210ENST00000409954 ARHGEF35A5YM69 484 aa16.06■□□□□ 0.16
MCF2L-210ENST00000409954 SPDYE4A6NLX3 237 aa16.06■□□□□ 0.16
MCF2L-210ENST00000409954 EFEMP2O95967 443 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms