RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 FAM187BQ17R55 369 aa21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 SLC27A1Q6PCB7 646 aa21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 DDX53Q86TM3 631 aaKnown RBP21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 ADHFE1Q8IWW8 467 aa21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 HACE1Q8IYU2 909 aa21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 SMRP1Q8NCR6 262 aa21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 VN1R2Q8NFZ6 395 aa21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 BSNDQ8WZ55 320 aa21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 FAM193BQ96PV7 902 aaPredicted RBP21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 TRIM6Q9C030 488 aaPredicted RBP21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 RNF39Q9H2S5 420 aa21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 DNM3Q9UQ16 869 aa21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 HES2Q9Y543 173 aa21.7■■□□□ 1.06
TSPAN4-209ENST00000409543 C2orf71A6NGG8 1288 aa21.69■■□□□ 1.06
TSPAN4-209ENST00000409543 PP2D1A8MPX8 630 aa21.69■■□□□ 1.06
TSPAN4-209ENST00000409543 B4GALT3O60512 393 aa21.69■■□□□ 1.06
TSPAN4-209ENST00000409543 POMCP01189 267 aa21.69■■□□□ 1.06
TSPAN4-209ENST00000409543 ALDH2P05091 517 aa21.69■■□□□ 1.06
TSPAN4-209ENST00000409543 SSTR3P32745 418 aaPredicted RBP21.69■■□□□ 1.06
TSPAN4-209ENST00000409543 CUL4AQ13619 759 aa21.69■■□□□ 1.06
TSPAN4-209ENST00000409543 VPS52Q8N1B4 723 aa21.69■■□□□ 1.06
TSPAN4-209ENST00000409543 KIFAP3Q92845 792 aa21.69■■□□□ 1.06
TSPAN4-209ENST00000409543 BACH2Q9BYV9 841 aa21.69■■□□□ 1.06
TSPAN4-209ENST00000409543 GIT1Q9Y2X7 761 aa21.69■■□□□ 1.06
TSPAN4-209ENST00000409543 ARL5CA6NH57 179 aa21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 C19orf67A6NJJ6 358 aa21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 CXCL14O95715 111 aa21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 SRGAP2BP0DMP2 458 aa21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 CDC25AP30304 524 aa21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 RBM10P98175 930 aaKnown RBP21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 DEPTORQ8TB45 409 aa21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 BCL7CQ8WUZ0 217 aaPredicted RBP21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 KHSRPQ92945 711 aaKnown RBP eCLIP21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 IFT74Q96LB3 600 aa21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 GAD1Q99259 594 aa21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 MMTAG2Q9BU76 263 aaKnown RBP21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 C1QTNF1Q9BXJ1 281 aa21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 ZBP1Q9H171 429 aa21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 NXF3Q9H4D5 531 aaKnown RBP21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 EPHX3Q9H6B9 360 aa21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 STK39Q9UEW8 545 aa21.68■■□□□ 1.06
TSPAN4-209ENST00000409543 E9PMD0 336 aa21.67■■□□□ 1.06
TSPAN4-209ENST00000409543 NPTXRO95502 500 aa21.67■■□□□ 1.06
TSPAN4-209ENST00000409543 CTSAP10619 480 aa21.67■■□□□ 1.06
TSPAN4-209ENST00000409543 MLH1P40692 756 aa21.67■■□□□ 1.06
TSPAN4-209ENST00000409543 MAPK6Q16659 721 aa21.67■■□□□ 1.06
TSPAN4-209ENST00000409543 ARL6IP4Q66PJ3 421 aaKnown RBP21.67■■□□□ 1.06
TSPAN4-209ENST00000409543 CDR2LQ86X02 465 aaPredicted RBP21.67■■□□□ 1.06
TSPAN4-209ENST00000409543 POP1Q99575 1024 aaKnown RBP21.67■■□□□ 1.06
TSPAN4-209ENST00000409543 CCDC113Q9H0I3 377 aa21.67■■□□□ 1.06
TSPAN4-209ENST00000409543 FAN1Q9Y2M0 1017 aa21.67■■□□□ 1.06
TSPAN4-209ENST00000409543 IRAK3Q9Y616 596 aa21.67■■□□□ 1.06
TSPAN4-209ENST00000409543 ZMYM2Q9UBW7 1377 aa21.66■■□□□ 1.06
TSPAN4-209ENST00000409543 PI4K2BG5E9Z4 385 aa21.66■■□□□ 1.06
TSPAN4-209ENST00000409543 ACKR2O00590 384 aa21.66■■□□□ 1.06
TSPAN4-209ENST00000409543 NRP1O14786 923 aa21.66■■□□□ 1.06
TSPAN4-209ENST00000409543 EFNA5P52803 228 aa21.66■■□□□ 1.06
TSPAN4-209ENST00000409543 PRPF4BQ13523 1007 aaKnown RBP21.66■■□□□ 1.06
TSPAN4-209ENST00000409543 GIT2Q14161 759 aa21.66■■□□□ 1.06
TSPAN4-209ENST00000409543 COLGALT2Q8IYK4 626 aa21.66■■□□□ 1.06
TSPAN4-209ENST00000409543 KCTD17Q8N5Z5 321 aa21.66■■□□□ 1.06
TSPAN4-209ENST00000409543 ZFP42Q96MM3 310 aa21.66■■□□□ 1.06
TSPAN4-209ENST00000409543 APOL6Q9BWW8 343 aa21.66■■□□□ 1.06
TSPAN4-209ENST00000409543 POLD4Q9HCU8 107 aa21.66■■□□□ 1.06
TSPAN4-209ENST00000409543 DAXXQ9UER7 740 aaPredicted RBP21.66■■□□□ 1.06
TSPAN4-209ENST00000409543 TTLL13PA6NNM8 815 aa21.65■■□□□ 1.06
TSPAN4-209ENST00000409543 N4BP3O15049 544 aa21.65■■□□□ 1.06
TSPAN4-209ENST00000409543 CLASP2O75122 1294 aaKnown RBP21.65■■□□□ 1.06
TSPAN4-209ENST00000409543 PRKCBP05771 671 aa21.65■■□□□ 1.06
TSPAN4-209ENST00000409543 AKAP5P24588 427 aa21.65■■□□□ 1.06
TSPAN4-209ENST00000409543 SCNN1GP51170 649 aa21.65■■□□□ 1.06
TSPAN4-209ENST00000409543 DSC1Q08554 894 aa21.65■■□□□ 1.06
TSPAN4-209ENST00000409543 HYIQ5T013 277 aa21.65■■□□□ 1.06
TSPAN4-209ENST00000409543 ANKRD54Q6NXT1 300 aa21.65■■□□□ 1.06
TSPAN4-209ENST00000409543 LLGL2Q6P1M3 1020 aa21.65■■□□□ 1.06
TSPAN4-209ENST00000409543 BRAPQ7Z569 592 aa21.65■■□□□ 1.06
TSPAN4-209ENST00000409543 VN1R3Q9BXE9 311 aa21.65■■□□□ 1.06
TSPAN4-209ENST00000409543 PDZD7Q9H5P4 517 aa21.65■■□□□ 1.06
TSPAN4-209ENST00000409543 MIOSQ9NXC5 875 aa21.65■■□□□ 1.06
TSPAN4-209ENST00000409543 USP15Q9Y4E8 981 aaPredicted RBP21.65■■□□□ 1.06
TSPAN4-209ENST00000409543 VWA3AA6NCI4 1184 aa21.64■■□□□ 1.05
TSPAN4-209ENST00000409543 HOXB8P17481 243 aaPredicted RBP21.64■■□□□ 1.05
TSPAN4-209ENST00000409543 CA8P35219 290 aa21.64■■□□□ 1.05
TSPAN4-209ENST00000409543 KCNK18Q7Z418 384 aa21.64■■□□□ 1.05
TSPAN4-209ENST00000409543 GSTCDQ8NEC7 633 aa21.64■■□□□ 1.05
TSPAN4-209ENST00000409543 CASP10Q92851 521 aa21.64■■□□□ 1.05
TSPAN4-209ENST00000409543 S1PR5Q9H228 398 aa21.64■■□□□ 1.05
TSPAN4-209ENST00000409543 HCFC2Q9Y5Z7 792 aa21.64■■□□□ 1.05
TSPAN4-209ENST00000409543 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.63■■□□□ 1.05
TSPAN4-209ENST00000409543 NR1I2O75469 434 aa21.63■■□□□ 1.05
TSPAN4-209ENST00000409543 PDCP20941 246 aa21.63■■□□□ 1.05
TSPAN4-209ENST00000409543 OR1G1P47890 313 aa21.63■■□□□ 1.05
TSPAN4-209ENST00000409543 TMEM132AQ24JP5 1023 aa21.63■■□□□ 1.05
TSPAN4-209ENST00000409543 RINT1Q6NUQ1 792 aa21.63■■□□□ 1.05
TSPAN4-209ENST00000409543 C1orf186Q6ZWK4 172 aa21.63■■□□□ 1.05
TSPAN4-209ENST00000409543 DAW1Q8N136 415 aa21.63■■□□□ 1.05
TSPAN4-209ENST00000409543 TMEM87AQ8NBN3 555 aa21.63■■□□□ 1.05
TSPAN4-209ENST00000409543 AUTS2Q8WXX7 1259 aa21.63■■□□□ 1.05
TSPAN4-209ENST00000409543 SUSD6Q92537 303 aa21.63■■□□□ 1.05
TSPAN4-209ENST00000409543 PNMA5Q96PV4 448 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms