RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 ATP4AP20648 1035 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 PHKA2P46019 1235 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 USP11P51784 963 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 NECTIN1Q15223 517 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 MTERF2Q49AM1 385 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 PKDCCQ504Y2 493 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 LRCH2Q5VUJ6 765 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 MIER3Q7Z3K6 550 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 CCDC105Q8IYK2 499 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 SIX5Q8N196 739 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 C12orf76Q8N812 135 aaPredicted RBP8.69□□□□□ -1.02
LSM5-202ENST00000409292 DTWD2Q8NBA8 298 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 CNNM3Q8NE01 707 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 SLC7A3Q8WY07 619 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 CCDC136Q96JN2 1154 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 TMEM175Q9BSA9 504 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 TRAIPQ9BWF2 469 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 LSG1Q9H089 658 aaKnown RBP8.69□□□□□ -1.02
LSM5-202ENST00000409292 ZMYND12Q9H0C1 365 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 PIDD1Q9HB75 910 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 FAM105AQ9NUU6 356 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 FAN1Q9Y2M0 1017 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 CNTNAP2Q9UHC6 1331 aa8.69□□□□□ -1.02
LSM5-202ENST00000409292 MYO10Q9HD67 2058 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 MARCH6O60337 910 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 GDF9O60383 454 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 ZNF623O75123 536 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 LMNAP02545 664 aaKnown RBP8.68□□□□□ -1.02
LSM5-202ENST00000409292 GALTP07902 379 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 CIITAP33076 1130 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 NLRP5P59047 1200 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 CREMQ03060 361 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 ANGPT1Q15389 498 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 LETM2Q2VYF4 491 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 CPLX2Q6PUV4 134 aaKnown RBP8.68□□□□□ -1.02
LSM5-202ENST00000409292 RNF19BQ6ZMZ0 732 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 RHPN2Q8IUC4 686 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 TRIM22Q8IYM9 498 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 SLC22A17Q8WUG5 538 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 PHKBQ93100 1093 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 BORCS6Q96GS4 357 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 SHDQ96IW2 340 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 ZNF668Q96K58 619 aaPredicted RBP8.68□□□□□ -1.02
LSM5-202ENST00000409292 NLRP4Q96MN2 994 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 YTHDC1Q96MU7 727 aaKnown RBP8.68□□□□□ -1.02
LSM5-202ENST00000409292 KLHL5Q96PQ7 755 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 RNF19AQ9NV58 838 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 TBC1D13Q9NVG8 400 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 SUCLA2Q9P2R7 463 aaPredicted RBP8.68□□□□□ -1.02
LSM5-202ENST00000409292 WNT16Q9UBV4 365 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 DUSP12Q9UNI6 340 aa8.68□□□□□ -1.02
LSM5-202ENST00000409292 A0A087WZ62 844 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 ZBTB24O43167 697 aaPredicted RBP8.67□□□□□ -1.02
LSM5-202ENST00000409292 PRPF3O43395 683 aaKnown RBP8.67□□□□□ -1.02
LSM5-202ENST00000409292 ERLIN2O94905 339 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 GLUD1P00367 558 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 SSBP05455 408 aaKnown RBP eCLIP8.67□□□□□ -1.02
LSM5-202ENST00000409292 SDHBP21912 280 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 FGFR4P22455 802 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 AK2P54819 239 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 PTPN14Q15678 1187 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 LINC01465Q8N7H1 131 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 CMASQ8NFW8 434 aaPredicted RBP8.67□□□□□ -1.02
LSM5-202ENST00000409292 TCP11Q8WWU5 503 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 AUTS2Q8WXX7 1259 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 SECISBP2LQ93073 1101 aaKnown RBP8.67□□□□□ -1.02
LSM5-202ENST00000409292 FDXACB1Q9BRP7 624 aaPredicted RBP8.67□□□□□ -1.02
LSM5-202ENST00000409292 COLEC11Q9BWP8 271 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 NIFKQ9BYG3 293 aaKnown RBP8.67□□□□□ -1.02
LSM5-202ENST00000409292 SLKQ9H2G2 1235 aaPredicted RBP8.67□□□□□ -1.02
LSM5-202ENST00000409292 NRDE2Q9H7Z3 1164 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 RSAD1Q9HA92 442 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 KCNK12Q9HB15 430 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 FAM217BQ9NTX9 383 aaPredicted RBP8.67□□□□□ -1.02
LSM5-202ENST00000409292 BRPF3Q9ULD4 1205 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 PPME1Q9Y570 386 aa8.67□□□□□ -1.02
LSM5-202ENST00000409292 C2CD2LO14523 706 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 MSH4O15457 936 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 ASAP2O43150 1006 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 GAS2O43903 313 aaKnown RBP8.66□□□□□ -1.02
LSM5-202ENST00000409292 OFD1O75665 1012 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 SOD2P04179 222 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 ITGA4P13612 1032 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 PSMA5P28066 241 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 SLC11A1P49279 550 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 GLUD2P49448 558 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 CLCN4P51793 760 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 PSMC5P62195 406 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 EXOSC10Q01780 885 aaKnown RBP8.66□□□□□ -1.02
LSM5-202ENST00000409292 PCBP1Q15365 356 aaKnown RBP eCLIP8.66□□□□□ -1.02
LSM5-202ENST00000409292 LONRF3Q496Y0 759 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 BLOC1S2Q6QNY1 142 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 OTUD6AQ7L8S5 288 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 DGLUCYQ7Z3D6 616 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 SRGAP1Q7Z6B7 1085 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 HDAC7Q8WUI4 952 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 PSPC1Q8WXF1 523 aaKnown RBP8.66□□□□□ -1.02
LSM5-202ENST00000409292 CRYGNQ8WXF5 182 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 SLC5A5Q92911 643 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 LPPQ93052 612 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms