RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SIP14410 1827 aa22.91■■□□□ 1.26
TPM1-208ENST00000404484 KPNA6O60684 536 aa22.91■■□□□ 1.26
TPM1-208ENST00000404484 PIGRP01833 764 aa22.91■■□□□ 1.26
TPM1-208ENST00000404484 SYN1P17600 705 aa22.91■■□□□ 1.26
TPM1-208ENST00000404484 LIG4P49917 911 aa22.91■■□□□ 1.26
TPM1-208ENST00000404484 DCAF17Q5H9S7 520 aaPredicted RBP22.91■■□□□ 1.26
TPM1-208ENST00000404484 CDCA2Q69YH5 1023 aaPredicted RBP22.91■■□□□ 1.26
TPM1-208ENST00000404484 LRRC71Q8N4P6 559 aa22.91■■□□□ 1.26
TPM1-208ENST00000404484 METTL13Q8N6R0 699 aa22.91■■□□□ 1.26
TPM1-208ENST00000404484 TRAPPC12Q8WVT3 735 aa22.91■■□□□ 1.26
TPM1-208ENST00000404484 CBWD1Q9BRT8 395 aa22.91■■□□□ 1.26
TPM1-208ENST00000404484 KATNAL1Q9BW62 490 aa22.91■■□□□ 1.26
TPM1-208ENST00000404484 SIK3Q9Y2K2 1263 aa22.91■■□□□ 1.26
TPM1-208ENST00000404484 A0A1W2PQJ5 194 aa22.9■■□□□ 1.26
TPM1-208ENST00000404484 KLRC1P26715 233 aa22.9■■□□□ 1.26
TPM1-208ENST00000404484 CASP14P31944 242 aa22.9■■□□□ 1.26
TPM1-208ENST00000404484 IGBP1P78318 339 aa22.9■■□□□ 1.26
TPM1-208ENST00000404484 MKRN4PQ13434 485 aaPredicted RBP22.9■■□□□ 1.26
TPM1-208ENST00000404484 TCERG1LQ5VWI1 586 aa22.9■■□□□ 1.26
TPM1-208ENST00000404484 TAS1R3Q7RTX0 852 aa22.9■■□□□ 1.26
TPM1-208ENST00000404484 CPLX3Q8WVH0 158 aa22.9■■□□□ 1.26
TPM1-208ENST00000404484 NAA15Q9BXJ9 866 aaKnown RBP22.9■■□□□ 1.26
TPM1-208ENST00000404484 CAPN11Q9UMQ6 739 aa22.9■■□□□ 1.26
TPM1-208ENST00000404484 LUC7L2Q9Y383 392 aaKnown RBP22.9■■□□□ 1.26
TPM1-208ENST00000404484 KCNJ6P48051 423 aa22.89■■□□□ 1.26
TPM1-208ENST00000404484 ADKP55263 362 aaKnown RBP22.89■■□□□ 1.26
TPM1-208ENST00000404484 TLE2Q04725 743 aa22.89■■□□□ 1.26
TPM1-208ENST00000404484 DRP2Q13474 957 aa22.89■■□□□ 1.26
TPM1-208ENST00000404484 GRIK4Q16099 956 aa22.89■■□□□ 1.26
TPM1-208ENST00000404484 TSR1Q2NL82 804 aaKnown RBP22.89■■□□□ 1.26
TPM1-208ENST00000404484 SLFN12LQ6IEE8 588 aa22.89■■□□□ 1.26
TPM1-208ENST00000404484 ZNF397Q8NF99 534 aaPredicted RBP22.89■■□□□ 1.26
TPM1-208ENST00000404484 KIAA1524Q8TCG1 905 aa22.89■■□□□ 1.26
TPM1-208ENST00000404484 POMGNT1Q8WZA1 660 aa22.89■■□□□ 1.26
TPM1-208ENST00000404484 EDEM3Q9BZQ6 932 aa22.89■■□□□ 1.26
TPM1-208ENST00000404484 TMX1Q9H3N1 280 aa22.89■■□□□ 1.26
TPM1-208ENST00000404484 KIAA1586Q9HCI6 787 aa22.89■■□□□ 1.26
TPM1-208ENST00000404484 PYCARDQ9ULZ3 195 aa22.89■■□□□ 1.26
TPM1-208ENST00000404484 ZNF500O60304 480 aaPredicted RBP22.89■■□□□ 1.25
TPM1-208ENST00000404484 STX10O60499 249 aa22.89■■□□□ 1.25
TPM1-208ENST00000404484 CABYRO75952 493 aa22.89■■□□□ 1.25
TPM1-208ENST00000404484 CDK7P50613 346 aa22.89■■□□□ 1.25
TPM1-208ENST00000404484 FXR1P51114 621 aaKnown RBP eCLIP22.89■■□□□ 1.25
TPM1-208ENST00000404484 POU5F1BQ06416 359 aa22.89■■□□□ 1.25
TPM1-208ENST00000404484 BFSP1Q12934 665 aa22.89■■□□□ 1.25
TPM1-208ENST00000404484 USP37Q86T82 979 aa22.89■■□□□ 1.25
TPM1-208ENST00000404484 RHPN2Q8IUC4 686 aa22.89■■□□□ 1.25
TPM1-208ENST00000404484 RNF149Q8NC42 400 aa22.89■■□□□ 1.25
TPM1-208ENST00000404484 SLC35C1Q96A29 364 aa22.89■■□□□ 1.25
TPM1-208ENST00000404484 BAG1Q99933 345 aaPredicted RBP22.89■■□□□ 1.25
TPM1-208ENST00000404484 PCIF1Q9H4Z3 704 aa22.89■■□□□ 1.25
TPM1-208ENST00000404484 GRIN2DO15399 1336 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 NRCAMQ92823 1304 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 GTPBP10A4D1E9 387 aaKnown RBP22.88■■□□□ 1.25
TPM1-208ENST00000404484 TISP43B9A030 160 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 ANKRD63C9JTQ0 380 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 MYL3P08590 195 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 KRT9P35527 623 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 CLCN3P51790 818 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 PURAQ00577 322 aaKnown RBP22.88■■□□□ 1.25
TPM1-208ENST00000404484 ENPEPQ07075 957 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 MTHFD1LQ6UB35 978 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 ZPBP2Q6X784 338 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 LINC01465Q8N7H1 131 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 NEK11Q8NG66 645 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 MAP7D2Q96T17 732 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 NFKBIZQ9BYH8 718 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 TTYH3Q9C0H2 523 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 MMRN2Q9H8L6 949 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 STYXL1Q9Y6J8 313 aa22.88■■□□□ 1.25
TPM1-208ENST00000404484 A0A0U1RQG5 324 aaPredicted RBP22.87■■□□□ 1.25
TPM1-208ENST00000404484 TTC26A0AVF1 554 aa22.87■■□□□ 1.25
TPM1-208ENST00000404484 ARVCFO00192 962 aa22.87■■□□□ 1.25
TPM1-208ENST00000404484 ARHGAP6O43182 974 aa22.87■■□□□ 1.25
TPM1-208ENST00000404484 PQBP1O60828 265 aaKnown RBP22.87■■□□□ 1.25
TPM1-208ENST00000404484 SRGAP2CP0DJJ0 459 aa22.87■■□□□ 1.25
TPM1-208ENST00000404484 ADSSP30520 456 aa22.87■■□□□ 1.25
TPM1-208ENST00000404484 PHKA2P46019 1235 aa22.87■■□□□ 1.25
TPM1-208ENST00000404484 MFSD10Q14728 455 aa22.87■■□□□ 1.25
TPM1-208ENST00000404484 MAPK6Q16659 721 aa22.87■■□□□ 1.25
TPM1-208ENST00000404484 SLC39A4Q6P5W5 647 aa22.87■■□□□ 1.25
TPM1-208ENST00000404484 ANKRD33Q7Z3H0 272 aa22.87■■□□□ 1.25
TPM1-208ENST00000404484 OR8K1Q8NGG5 319 aa22.87■■□□□ 1.25
TPM1-208ENST00000404484 MRPL4Q9BYD3 311 aaKnown RBP22.87■■□□□ 1.25
TPM1-208ENST00000404484 ABHD10Q9NUJ1 306 aa22.87■■□□□ 1.25
TPM1-208ENST00000404484 N4BP1O75113 896 aaKnown RBP22.86■■□□□ 1.25
TPM1-208ENST00000404484 PSEN2P49810 448 aa22.86■■□□□ 1.25
TPM1-208ENST00000404484 ZBED6P86452 979 aa22.86■■□□□ 1.25
TPM1-208ENST00000404484 GOLGA8FQ08AF8 430 aa22.86■■□□□ 1.25
TPM1-208ENST00000404484 GOLGA8DPQ0D2H9 430 aa22.86■■□□□ 1.25
TPM1-208ENST00000404484 ITGA7Q13683 1181 aa22.86■■□□□ 1.25
TPM1-208ENST00000404484 KIAA0753Q2KHM9 967 aa22.86■■□□□ 1.25
TPM1-208ENST00000404484 GPD1LQ8N335 351 aa22.86■■□□□ 1.25
TPM1-208ENST00000404484 SLC43A3Q8NBI5 491 aa22.86■■□□□ 1.25
TPM1-208ENST00000404484 FBXL18Q96ME1 805 aa22.86■■□□□ 1.25
TPM1-208ENST00000404484 TOX2Q96NM4 488 aa22.86■■□□□ 1.25
TPM1-208ENST00000404484 CCDC113Q9H0I3 377 aa22.86■■□□□ 1.25
TPM1-208ENST00000404484 KAT6AQ92794 2004 aa22.86■■□□□ 1.25
TPM1-208ENST00000404484 PTENP60484 403 aa22.85■■□□□ 1.25
TPM1-208ENST00000404484 CDC42EP1Q00587 391 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms