RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 TBC1D16Q8TBP0 767 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 ZNF564Q8TBZ8 553 aaPredicted RBP9.84□□□□□ -0.83
HPS4-203ENST00000402105 DHX38Q92620 1227 aaKnown RBP9.84□□□□□ -0.83
HPS4-203ENST00000402105 HAUS1Q96CS2 278 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 CBWD1Q9BRT8 395 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 PITPNM3Q9BZ71 974 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 TRIM7Q9C029 511 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 ADAM7Q9H2U9 754 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 ALG13Q9NP73 1137 aaKnown RBP9.84□□□□□ -0.83
HPS4-203ENST00000402105 KCNMB3Q9NPA1 279 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 AGPAT3Q9NRZ7 376 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 ATXN2Q99700 1313 aaKnown RBP9.84□□□□□ -0.83
HPS4-203ENST00000402105 CES2O00748 559 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 MGRN1O60291 552 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 COILP38432 576 aaPredicted RBP9.84□□□□□ -0.83
HPS4-203ENST00000402105 JAM2P57087 298 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 DNAJC3Q13217 504 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 DHX34Q14147 1143 aaKnown RBP9.84□□□□□ -0.83
HPS4-203ENST00000402105 TAF11Q15544 211 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 RFX8Q6ZV50 586 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 SPATA21Q7Z572 469 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 PASD1Q8IV76 773 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 ZSWIM1Q9BR11 485 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 PAGR1Q9BTK6 254 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 EPB41L4BQ9H329 900 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 CHST7Q9NS84 486 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 HOMER2Q9NSB8 354 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 GRHL1Q9NZI5 618 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 NOP53Q9NZM5 478 aaKnown RBP9.84□□□□□ -0.83
HPS4-203ENST00000402105 PITPNM2Q9BZ72 1349 aa9.84□□□□□ -0.83
HPS4-203ENST00000402105 GOLGA8SH3BPF8 625 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 GOLGA8MH3BSY2 632 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 SNX3O60493 162 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 DNAJC8O75937 253 aaPredicted RBP9.83□□□□□ -0.84
HPS4-203ENST00000402105 VCAM1P19320 739 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 TARSP26639 723 aaKnown RBP9.83□□□□□ -0.84
HPS4-203ENST00000402105 SEPT7Q16181 437 aaKnown RBP9.83□□□□□ -0.84
HPS4-203ENST00000402105 LMBRD2Q68DH5 695 aaPredicted RBP9.83□□□□□ -0.84
HPS4-203ENST00000402105 ZNF365Q70YC5 407 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 C4orf33Q8N1A6 199 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 SPOCK2Q92563 424 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 PI4K2AQ9BTU6 479 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 ANAPC7Q9UJX3 599 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 ANAPC5Q9UJX4 755 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 SPATA31A1Q5TZJ5 1347 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 SYNGAP1Q96PV0 1343 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 PODXLO00592 558 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 ATP2B4P23634 1241 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 CLK2P49760 499 aaKnown RBP9.83□□□□□ -0.84
HPS4-203ENST00000402105 ITGA8P53708 1063 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 BFSP1Q12934 665 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 SLMAPQ14BN4 828 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 EMC10Q5UCC4 262 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 PPP1R18Q6NYC8 613 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 CDC42EP5Q6NZY7 148 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 ARHGAP27Q6ZUM4 889 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 TEX2Q8IWB9 1127 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 RMDN2Q96LZ7 410 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 KIFC3Q9BVG8 833 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 PPP1R12CQ9BZL4 782 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 KIF9Q9HAQ2 790 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 GGA2Q9UJY4 613 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 PFASO15067 1338 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 C5orf60A6NFR6 353 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 BTNL10A8MVZ5 291 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 RASA4BC9J798 803 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 RASA4O43374 803 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 HIP1RO75146 1068 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 EYA4O95677 639 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 IFNB1P01574 187 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 SMARCA1P28370 1054 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 ZNF131P52739 623 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 COPS2P61201 443 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 NCALDP61601 193 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 POU5F1Q01860 360 aaKnown RBP9.83□□□□□ -0.84
HPS4-203ENST00000402105 PPP3CAQ08209 521 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 WLSQ5T9L3 541 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 STXBP4Q6ZWJ1 553 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 SLC13A5Q86YT5 568 aaPredicted RBP9.83□□□□□ -0.84
HPS4-203ENST00000402105 RHOT2Q8IXI1 618 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 FITM2Q8N6M3 262 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 CPA5Q8WXQ8 436 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 IFT74Q96LB3 600 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 PCDHB18PQ96TA0 734 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 NAP1L4Q99733 375 aaKnown RBP9.83□□□□□ -0.84
HPS4-203ENST00000402105 ZNF577Q9BSK1 485 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 ARHGEF10LQ9HCE6 1279 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 PARP2Q9UGN5 583 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 HAO1Q9UJM8 370 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 INTUQ9ULD6 942 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 USP20Q9Y2K6 914 aa9.83□□□□□ -0.84
HPS4-203ENST00000402105 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.82□□□□□ -0.84
HPS4-203ENST00000402105 ASAP2O43150 1006 aa9.82□□□□□ -0.84
HPS4-203ENST00000402105 SLITRK3O94933 977 aa9.82□□□□□ -0.84
HPS4-203ENST00000402105 GH2P01242 217 aa9.82□□□□□ -0.84
HPS4-203ENST00000402105 ATF2P15336 505 aa9.82□□□□□ -0.84
HPS4-203ENST00000402105 MAPK4P31152 587 aa9.82□□□□□ -0.84
HPS4-203ENST00000402105 RWDD2BP57060 319 aa9.82□□□□□ -0.84
HPS4-203ENST00000402105 PPATQ06203 517 aa9.82□□□□□ -0.84
HPS4-203ENST00000402105 LACTB2Q53H82 288 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms