RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 MYBPC2Q14324 1141 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 CASP8Q14790 479 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 STXBP2Q15833 593 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 ZSCAN26Q16670 478 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 C10orf76Q5T2E6 689 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 SLC39A4Q6P5W5 647 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 MAP4K3Q8IVH8 894 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 RDM1Q8NG50 284 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 SLC20A1Q8WUM9 679 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 TIPINQ9BVW5 301 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 ST6GALNAC4Q9H4F1 302 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 ACP6Q9NPH0 428 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 TAS2R14Q9NYV8 317 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 WDR90Q96KV7 1748 aa12.74□□□□□ -0.37
COL25A1-202ENST00000399127 LRRIQ3A6PVS8 624 aaPredicted RBP12.73□□□□□ -0.37
COL25A1-202ENST00000399127 KCNK3O14649 394 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 KIF1CO43896 1103 aaKnown RBP12.73□□□□□ -0.37
COL25A1-202ENST00000399127 N4BP1O75113 896 aaKnown RBP12.73□□□□□ -0.37
COL25A1-202ENST00000399127 CETN1Q12798 172 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 MKRN3Q13064 507 aaKnown RBP12.73□□□□□ -0.37
COL25A1-202ENST00000399127 KCTD19Q17RG1 926 aaPredicted RBP12.73□□□□□ -0.37
COL25A1-202ENST00000399127 TTC31Q49AM3 519 aaPredicted RBP12.73□□□□□ -0.37
COL25A1-202ENST00000399127 CFAP221Q4G0U5 840 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 PACS2Q86VP3 889 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 C12orf56Q8IXR9 622 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 POMGNT1Q8WZA1 660 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 KIFAP3Q92845 792 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 TMEM143Q96AN5 459 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 BICD1Q96G01 975 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 CDHR1Q96JP9 859 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 POLR3FQ9H1D9 316 aaPredicted RBP12.73□□□□□ -0.37
COL25A1-202ENST00000399127 OSGEPQ9NPF4 335 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 NENFQ9UMX5 172 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 IGSF9BQ9UPX0 1349 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 DLATP10515 647 aaKnown RBP12.73□□□□□ -0.37
COL25A1-202ENST00000399127 EPC2Q52LR7 807 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 LBX2Q6XYB7 198 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 PPM1KQ8N3J5 372 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 SLC30A5Q8TAD4 765 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 SLC10A4Q96EP9 437 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 IWS1Q96ST2 819 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 EXOC7Q9UPT5 735 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 RRP15Q9Y3B9 282 aaKnown RBP12.73□□□□□ -0.37
COL25A1-202ENST00000399127 MYH9P35579 1960 aaKnown RBP12.73□□□□□ -0.37
COL25A1-202ENST00000399127 NFASCO94856 1347 aa12.73□□□□□ -0.37
COL25A1-202ENST00000399127 TARSL2A2RTX5 802 aaKnown RBP12.72□□□□□ -0.37
COL25A1-202ENST00000399127 SPDYE5A6NIY4 337 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 DGAT1O75907 488 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 SUPT20HL2P0C7V6 817 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 ATP4AP20648 1035 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 MIS18BP1Q6P0N0 1132 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 MMGT1Q8N4V1 131 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 LRRC57Q8N9N7 239 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 TPCN2Q8NHX9 752 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 SEMA4DQ92854 862 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 UBXN6Q9BZV1 441 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 ATP6V0A4Q9HBG4 840 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 CWC15Q9P013 229 aaKnown RBP12.72□□□□□ -0.37
COL25A1-202ENST00000399127 ARID2Q68CP9 1835 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 A0A0G2JLL6 359 aaPredicted RBP12.72□□□□□ -0.37
COL25A1-202ENST00000399127 EIF3JO75822 258 aaKnown RBP12.72□□□□□ -0.37
COL25A1-202ENST00000399127 TUBBP07437 444 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 TNFAIP3P21580 790 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 POLGP54098 1239 aaPredicted RBP12.72□□□□□ -0.37
COL25A1-202ENST00000399127 RPS6KA1Q15418 735 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 CCDC70Q6NSX1 233 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 ZNF572Q7Z3I7 529 aaPredicted RBP12.72□□□□□ -0.37
COL25A1-202ENST00000399127 CCDC91Q7Z6B0 441 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 PRRT2Q7Z6L0 340 aaPredicted RBP12.72□□□□□ -0.37
COL25A1-202ENST00000399127 DAAM2Q86T65 1068 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 MED4Q9NPJ6 270 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 ZNF302Q9NR11 478 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 CHORDC1Q9UHD1 332 aaPredicted RBP12.72□□□□□ -0.37
COL25A1-202ENST00000399127 PTPRFP10586 1907 aa12.72□□□□□ -0.37
COL25A1-202ENST00000399127 PGK2P07205 417 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 ALDH5A1P51649 535 aaPredicted RBP12.71□□□□□ -0.37
COL25A1-202ENST00000399127 EMC2Q15006 297 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 LMBRD2Q68DH5 695 aaPredicted RBP12.71□□□□□ -0.37
COL25A1-202ENST00000399127 TAS1R3Q7RTX0 852 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 MCPH1Q8NEM0 835 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 CHST13Q8NET6 341 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 TAF4BQ92750 862 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 ARHGEF26Q96DR7 871 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 SGSM3Q96HU1 749 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 FAM213AQ9BRX8 229 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 SYT11Q9BT88 431 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 SPATC1LQ9H0A9 340 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 PDLIM7Q9NR12 457 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 MYPNQ86TC9 1320 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 SYNGAP1Q96PV0 1343 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 OTOFQ9HC10 1997 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 ZSCAN5CA6NGD5 496 aaPredicted RBP12.71□□□□□ -0.37
COL25A1-202ENST00000399127 BTNL10A8MVZ5 291 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 CXCL11O14625 94 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 PHACTR2O75167 634 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 KIF4AO95239 1232 aa12.71□□□□□ -0.37
COL25A1-202ENST00000399127 UBA1P22314 1058 aaKnown RBP12.71□□□□□ -0.37
COL25A1-202ENST00000399127 GSCP56915 257 aaPredicted RBP12.71□□□□□ -0.37
COL25A1-202ENST00000399127 PPIL2Q13356 520 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms