RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 MAFO75444 373 aaPredicted RBP3.71□□□□□ -1.82
CD47-203ENST00000398258 RBP3P10745 1247 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 PTGS1P23219 599 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 CD40P25942 277 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 AOAHP28039 575 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 ADCY1Q08828 1119 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 PIN1Q13526 163 aaPredicted RBP3.71□□□□□ -1.82
CD47-203ENST00000398258 RIN1Q13671 783 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 STILQ15468 1287 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 LRSAM1Q6UWE0 723 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 FRMD7Q6ZUT3 714 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 RAVER1Q8IY67 606 aaKnown RBP3.71□□□□□ -1.82
CD47-203ENST00000398258 BEND2Q8NDZ0 799 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 HIPK4Q8NE63 616 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 ASB15Q8WXK1 588 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 HAS1Q92839 578 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 LENG9Q96B70 501 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 ZNF496Q96IT1 587 aaPredicted RBP3.71□□□□□ -1.82
CD47-203ENST00000398258 GBP4Q96PP9 640 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 WNT8AQ9H1J5 351 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 OR10A2Q9H208 303 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 MSL2Q9HCI7 577 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 INCENPQ9NQS7 918 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 TOPORSQ9NS56 1045 aaPredicted RBP3.71□□□□□ -1.82
CD47-203ENST00000398258 TOMM22Q9NS69 142 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 TRPS1Q9UHF7 1281 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 G3BP2Q9UN86 482 aaKnown RBP3.71□□□□□ -1.82
CD47-203ENST00000398258 ASB1Q9Y576 335 aa3.71□□□□□ -1.82
CD47-203ENST00000398258 PRAMEF22A3QJZ6 481 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 GRXCR1A8MXD5 290 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 TSPAN6O43657 245 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 RFPL1O75677 317 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 MPIG6BO95866 241 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 GPR3P46089 330 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 RAB27AP51159 221 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 PTTG1IPP53801 180 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 PDCD1Q15116 288 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 TMEM240Q5SV17 173 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 C1QL3Q5VWW1 255 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 NXNQ6DKJ4 435 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 KANSL1Q7Z3B3 1105 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 HDGFL2Q7Z4V5 671 aaPredicted RBP3.7□□□□□ -1.82
CD47-203ENST00000398258 FMNL3Q8IVF7 1028 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 C1orf162Q8NEQ5 155 aaPredicted RBP3.7□□□□□ -1.82
CD47-203ENST00000398258 SSH1Q8WYL5 1049 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 FUBP3Q96I24 572 aaKnown RBP eCLIP3.7□□□□□ -1.82
CD47-203ENST00000398258 C8orf48Q96LL4 319 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 ACAP3Q96P50 834 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 BRIP1Q9BX63 1249 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 AMNQ9BXJ7 453 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 C14orf119Q9NWQ9 140 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 GEMIN8Q9NWZ8 242 aaKnown RBP3.7□□□□□ -1.82
CD47-203ENST00000398258 TCEAL9Q9UHQ7 104 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 HS3ST4Q9Y661 456 aa3.7□□□□□ -1.82
CD47-203ENST00000398258 KLRG2A4D1S0 409 aaPredicted RBP3.69□□□□□ -1.82
CD47-203ENST00000398258 ZNF185O15231 689 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 CYP27B1O15528 508 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 KDM1AO60341 852 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 RHOBTB3O94955 611 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 CFBP00751 764 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 STAT5BP51692 787 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 RABGGTBP53611 331 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 CD83Q01151 205 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 FSCN1Q16658 493 aaKnown RBP3.69□□□□□ -1.82
CD47-203ENST00000398258 KANK2Q63ZY3 851 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 SLC25A43Q8WUT9 341 aaPredicted RBP3.69□□□□□ -1.82
CD47-203ENST00000398258 E2F7Q96AV8 911 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 HOOK2Q96ED9 719 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 FAXDC2Q96IV6 333 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 MAML3Q96JK9 1138 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 FOXB1Q99853 325 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 RTFDC1Q9BY42 306 aaPredicted RBP3.69□□□□□ -1.82
CD47-203ENST00000398258 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 ZNF277Q9NRM2 450 aaPredicted RBP3.69□□□□□ -1.82
CD47-203ENST00000398258 GALNT8Q9NY28 637 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 NOC2LQ9Y3T9 749 aaKnown RBP3.69□□□□□ -1.82
CD47-203ENST00000398258 COX11Q9Y6N1 276 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 XDHP47989 1333 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 WASHC2AQ641Q2 1341 aa3.69□□□□□ -1.82
CD47-203ENST00000398258 COL3A1P02461 1466 aaPredicted RBP3.68□□□□□ -1.82
CD47-203ENST00000398258 PMS2P1A4D2B8 440 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 SCGB1D2O95969 90 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 PRLP01236 227 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 ENPP1P22413 925 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 PTGS2P35354 604 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 IARSP41252 1262 aaKnown RBP3.68□□□□□ -1.82
CD47-203ENST00000398258 ECE1P42892 770 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 RECQLP46063 649 aaPredicted RBP3.68□□□□□ -1.82
CD47-203ENST00000398258 PTH2RP49190 550 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 MTNR1BP49286 362 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 MAN2A2P49641 1150 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 MANFP55145 182 aaKnown RBP3.68□□□□□ -1.82
CD47-203ENST00000398258 ADAM8P78325 824 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 PPP2R5AQ15172 486 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 HSP90AB2PQ58FF8 381 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 HECTD2Q5U5R9 776 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 TMEM200BQ69YZ2 307 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 DPP8Q6V1X1 898 aaPredicted RBP3.68□□□□□ -1.82
CD47-203ENST00000398258 KCNK18Q7Z418 384 aa3.68□□□□□ -1.82
CD47-203ENST00000398258 ZBTB46Q86UZ6 589 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms