RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 ANP32DO95626 131 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 MKNK2Q9HBH9 465 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 CABP1Q9NZU7 370 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 MOCS3O95396 460 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 CASP5P51878 434 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 EFTUD2Q15029 972 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCBE1-201ENST00000398179 KRT79Q5XKE5 535 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 PRPF39Q86UA1 669 aaKnown RBP13.55□□□□□ -0.24
CCBE1-201ENST00000398179 CAMKK1Q8N5S9 505 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 PRAM1Q96QH2 718 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 KCNK1O00180 336 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 MAPRE2Q15555 327 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 ZMYM1Q5SVZ6 1142 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 NEUROD4Q9HD90 331 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 ARHGEF38Q9NXL2 777 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 HECW1Q76N89 1606 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 KIF24Q5T7B8 1368 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 TCP11X1B4DZS4 312 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 WRBO00258 174 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 ATP9AO75110 1047 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 BPNT1O95861 308 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 GDI1P31150 447 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 C10orf107Q8IVU9 208 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 ULK2Q8IYT8 1036 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 OR8K3Q8NH51 312 aa13.55□□□□□ -0.24
CCBE1-201ENST00000398179 RSL24D1Q9UHA3 163 aaKnown RBP13.55□□□□□ -0.24
CCBE1-201ENST00000398179 CLRN2A0PK11 232 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 ACSL4O60488 711 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 P4HA1P13674 534 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 STAT6P42226 847 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 ZNF132P52740 706 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 IL9RQ01113 521 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 SMAD1Q15797 465 aaKnown RBP13.54□□□□□ -0.24
CCBE1-201ENST00000398179 HP1BP3Q5SSJ5 553 aaPredicted RBP13.54□□□□□ -0.24
CCBE1-201ENST00000398179 FAM122CQ6P4D5 195 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 TRMT1LQ7Z2T5 733 aaKnown RBP13.54□□□□□ -0.24
CCBE1-201ENST00000398179 SIX6OS1Q8N1H7 587 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 PSKH2Q96QS6 385 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 OSBPL11Q9BXB4 747 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 PACSIN1Q9BY11 444 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 SP140LQ9H930 580 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 ZC3H7BQ9UGR2 993 aaKnown RBP13.54□□□□□ -0.24
CCBE1-201ENST00000398179 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 CUL7Q14999 1698 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 CCDC182A6NF36 153 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 CYP19A1P11511 503 aaPredicted RBP13.54□□□□□ -0.24
CCBE1-201ENST00000398179 VAMP1P23763 118 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 MAGEA6P43360 314 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 RARS2Q5T160 578 aaKnown RBP13.54□□□□□ -0.24
CCBE1-201ENST00000398179 C1orf146Q5VVC0 180 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 ANKRD26P1Q6NSI1 321 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 LRRC6Q86X45 466 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 AGGF1Q8N302 714 aaeCLIP13.54□□□□□ -0.24
CCBE1-201ENST00000398179 APPL2Q8NEU8 664 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 FADS3Q9Y5Q0 445 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 GNAT3A8MTJ3 354 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 PLCG1P19174 1290 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 EPHB4P54760 987 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 GSCP56915 257 aaPredicted RBP13.54□□□□□ -0.24
CCBE1-201ENST00000398179 NR5A1Q13285 461 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 PLEKHM3Q6ZWE6 761 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 PFDN5Q99471 154 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 STRN4Q9NRL3 753 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 KLHL11Q9NVR0 708 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 BTBD19C9JJ37 291 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 M0R3G1 203 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 MYO1FO00160 1098 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 NR1D1P20393 614 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 PSMA2P25787 234 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 BTN3A2P78410 334 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 SEL1L2Q5TEA6 688 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 MFSD6Q6ZSS7 791 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 RBM46Q8TBY0 533 aaKnown RBP13.54□□□□□ -0.24
CCBE1-201ENST00000398179 WWOXQ9NZC7 414 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 ZW10O43264 779 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 MINDY4Q4G0A6 757 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 IRGCQ6NXR0 463 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 ZKSCAN4Q969J2 545 aaPredicted RBP13.54□□□□□ -0.24
CCBE1-201ENST00000398179 COX4I2Q96KJ9 171 aa13.54□□□□□ -0.24
CCBE1-201ENST00000398179 FPGTO14772 594 aa13.53□□□□□ -0.24
CCBE1-201ENST00000398179 TOP3BO95985 862 aaKnown RBP13.53□□□□□ -0.24
CCBE1-201ENST00000398179 SPAM1P38567 509 aa13.53□□□□□ -0.24
CCBE1-201ENST00000398179 BBS7Q8IWZ6 715 aa13.53□□□□□ -0.24
CCBE1-201ENST00000398179 APOL4Q9BPW4 351 aa13.53□□□□□ -0.24
CCBE1-201ENST00000398179 SNX7Q9UNH6 387 aa13.53□□□□□ -0.24
CCBE1-201ENST00000398179 PTPRGP23470 1445 aa13.53□□□□□ -0.24
CCBE1-201ENST00000398179 C6orf10Q5SRN2 563 aa13.53□□□□□ -0.24
CCBE1-201ENST00000398179 FAM180AQ6UWF9 173 aa13.53□□□□□ -0.24
CCBE1-201ENST00000398179 SETD3Q86TU7 594 aaPredicted RBP13.53□□□□□ -0.24
CCBE1-201ENST00000398179 RASSF3Q86WH2 238 aa13.53□□□□□ -0.24
CCBE1-201ENST00000398179 DNAAF3Q8N9W5 541 aa13.53□□□□□ -0.24
CCBE1-201ENST00000398179 CDK19Q9BWU1 502 aa13.53□□□□□ -0.24
CCBE1-201ENST00000398179 SLC7A5P2Q9GIP4 190 aa13.53□□□□□ -0.24
CCBE1-201ENST00000398179 STX8Q9UNK0 236 aa13.53□□□□□ -0.24
CCBE1-201ENST00000398179 hCG_1642624A0A1W2PR95 340 aa13.53□□□□□ -0.24
CCBE1-201ENST00000398179 RPS2P15880 293 aaKnown RBP13.53□□□□□ -0.24
CCBE1-201ENST00000398179 HNF1BP35680 557 aa13.53□□□□□ -0.24
CCBE1-201ENST00000398179 YAP1P46937 504 aaKnown RBP13.53□□□□□ -0.24
CCBE1-201ENST00000398179 QARSP47897 775 aaKnown RBP13.53□□□□□ -0.24
CCBE1-201ENST00000398179 EXOSC10Q01780 885 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms