RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 AGMOQ6ZNB7 445 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 MAEAQ7L5Y9 396 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 TMC7Q7Z402 723 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 ADGRD2Q7Z7M1 963 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 KHSRPQ92945 711 aaKnown RBP eCLIP15.4■□□□□ 0.06
SEC13-204ENST00000397099 SNX21Q969T3 373 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 CALML4Q96GE6 196 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 ADPGKQ9BRR6 497 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 ENTPD7Q9NQZ7 604 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 RAPGEFL1Q9UHV5 662 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 RBM19Q9Y4C8 960 aaKnown RBP15.4■□□□□ 0.06
SEC13-204ENST00000397099 IPPQ9Y573 584 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 TDRD15B5MCY1 1934 aaKnown RBP15.39■□□□□ 0.05
SEC13-204ENST00000397099 A0A087WWV3 80 aa15.39■□□□□ 0.05
SEC13-204ENST00000397099 FAM86C2PA6NEL3 165 aa15.39■□□□□ 0.05
SEC13-204ENST00000397099 ZC3H11AO75152 810 aaKnown RBP eCLIP15.39■□□□□ 0.05
SEC13-204ENST00000397099 TBX10O75333 385 aa15.39■□□□□ 0.05
SEC13-204ENST00000397099 GUCY2CP25092 1073 aa15.39■□□□□ 0.05
SEC13-204ENST00000397099 UBA7P41226 1012 aa15.39■□□□□ 0.05
SEC13-204ENST00000397099 DMP1Q13316 513 aaPredicted RBP15.39■□□□□ 0.05
SEC13-204ENST00000397099 PRPF4BQ13523 1007 aaKnown RBP15.39■□□□□ 0.05
SEC13-204ENST00000397099 IL17AQ16552 155 aa15.39■□□□□ 0.05
SEC13-204ENST00000397099 ECM1Q16610 540 aa15.39■□□□□ 0.05
SEC13-204ENST00000397099 TMEM31Q5JXX7 168 aa15.39■□□□□ 0.05
SEC13-204ENST00000397099 LPPQ93052 612 aa15.39■□□□□ 0.05
SEC13-204ENST00000397099 TCF25Q9BQ70 676 aa15.39■□□□□ 0.05
SEC13-204ENST00000397099 MMTAG2Q9BU76 263 aaKnown RBP15.39■□□□□ 0.05
SEC13-204ENST00000397099 ZSCAN16Q9H4T2 348 aaPredicted RBP15.39■□□□□ 0.05
SEC13-204ENST00000397099 GPRC5CQ9NQ84 441 aa15.39■□□□□ 0.05
SEC13-204ENST00000397099 CD207Q9UJ71 328 aa15.39■□□□□ 0.05
SEC13-204ENST00000397099 INPP5FQ9Y2H2 1132 aa15.39■□□□□ 0.05
SEC13-204ENST00000397099 PCDHGC5Q9Y5F6 944 aa15.39■□□□□ 0.05
SEC13-204ENST00000397099 MYH11P35749 1972 aa15.38■□□□□ 0.05
SEC13-204ENST00000397099 K7ERI5 159 aa15.38■□□□□ 0.05
SEC13-204ENST00000397099 PRKCBP05771 671 aa15.38■□□□□ 0.05
SEC13-204ENST00000397099 ERVFC1P60507 584 aa15.38■□□□□ 0.05
SEC13-204ENST00000397099 SMAD4Q13485 552 aaKnown RBP15.38■□□□□ 0.05
SEC13-204ENST00000397099 DUSP6Q16828 381 aa15.38■□□□□ 0.05
SEC13-204ENST00000397099 TMEM132AQ24JP5 1023 aa15.38■□□□□ 0.05
SEC13-204ENST00000397099 DCAF4L1Q3SXM0 396 aa15.38■□□□□ 0.05
SEC13-204ENST00000397099 TMEM184AQ6ZMB5 413 aa15.38■□□□□ 0.05
SEC13-204ENST00000397099 DDX53Q86TM3 631 aaKnown RBP15.38■□□□□ 0.05
SEC13-204ENST00000397099 SYT2Q8N9I0 419 aaPredicted RBP15.38■□□□□ 0.05
SEC13-204ENST00000397099 TMEM87AQ8NBN3 555 aa15.38■□□□□ 0.05
SEC13-204ENST00000397099 SMG8Q8ND04 991 aaKnown RBP15.38■□□□□ 0.05
SEC13-204ENST00000397099 IGSF21Q96ID5 467 aa15.38■□□□□ 0.05
SEC13-204ENST00000397099 CPB2Q96IY4 423 aa15.38■□□□□ 0.05
SEC13-204ENST00000397099 POP1Q99575 1024 aaKnown RBP15.38■□□□□ 0.05
SEC13-204ENST00000397099 NRDE2Q9H7Z3 1164 aa15.38■□□□□ 0.05
SEC13-204ENST00000397099 SSX2IPQ9Y2D8 614 aa15.38■□□□□ 0.05
SEC13-204ENST00000397099 IRAK3Q9Y616 596 aa15.38■□□□□ 0.05
SEC13-204ENST00000397099 ARL5CA6NH57 179 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 E9PMD0 336 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 PI4K2BG5E9Z4 385 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 H0YCG3 227 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 PER2O15055 1255 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 MBTPS2O43462 519 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 GALTP07902 379 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 SYT1P21579 422 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 ABCD1P33897 745 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 SMTNP53814 917 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 ZP2Q05996 745 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 COASYQ13057 564 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 PLPP4Q5VZY2 271 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 RINT1Q6NUQ1 792 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 C1orf186Q6ZWK4 172 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 CABP7Q86V35 215 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 ADHFE1Q8IWW8 467 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 MRPL43Q8N983 215 aaKnown RBP15.37■□□□□ 0.05
SEC13-204ENST00000397099 LRFN3Q9BTN0 628 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 EIF2AQ9BY44 585 aaKnown RBP15.37■□□□□ 0.05
SEC13-204ENST00000397099 CCDC113Q9H0I3 377 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 TMEM134Q9H6X4 195 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 FAN1Q9Y2M0 1017 aa15.37■□□□□ 0.05
SEC13-204ENST00000397099 MORC2Q9Y6X9 1032 aaPredicted RBP15.37■□□□□ 0.05
SEC13-204ENST00000397099 MEIS3P2A8K0S8 358 aa15.36■□□□□ 0.05
SEC13-204ENST00000397099 PP2D1A8MPX8 630 aa15.36■□□□□ 0.05
SEC13-204ENST00000397099 HOXB8P17481 243 aaPredicted RBP15.36■□□□□ 0.05
SEC13-204ENST00000397099 CDC25AP30304 524 aa15.36■□□□□ 0.05
SEC13-204ENST00000397099 PBX3P40426 434 aa15.36■□□□□ 0.05
SEC13-204ENST00000397099 SF3A1Q15459 793 aaKnown RBP15.36■□□□□ 0.05
SEC13-204ENST00000397099 SMAD2Q15796 467 aaKnown RBP15.36■□□□□ 0.05
SEC13-204ENST00000397099 LONRF3Q496Y0 759 aa15.36■□□□□ 0.05
SEC13-204ENST00000397099 PPFIBP1Q86W92 1011 aa15.36■□□□□ 0.05
SEC13-204ENST00000397099 HSCBQ8IWL3 235 aa15.36■□□□□ 0.05
SEC13-204ENST00000397099 MSLNLQ96KJ4 702 aa15.36■□□□□ 0.05
SEC13-204ENST00000397099 RPS6KC1Q96S38 1066 aa15.36■□□□□ 0.05
SEC13-204ENST00000397099 NTPCRQ9BSD7 190 aaKnown RBP15.36■□□□□ 0.05
SEC13-204ENST00000397099 LARSQ9P2J5 1176 aaKnown RBP15.36■□□□□ 0.05
SEC13-204ENST00000397099 BARX2Q9UMQ3 279 aaPredicted RBP15.36■□□□□ 0.05
SEC13-204ENST00000397099 GTF3C3Q9Y5Q9 886 aa15.36■□□□□ 0.05
SEC13-204ENST00000397099 CCDC169A6NNP5 214 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 B4GALT5O43286 388 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 HIP1RO75146 1068 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 NPTXRO95502 500 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 CTSAP10619 480 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 ALADP13716 330 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 SLC11A1P49279 550 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 PEX3P56589 373 aa15.35■□□□□ 0.05
SEC13-204ENST00000397099 GRIK3Q13003 919 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms