RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 EIF2AQ9BY44 585 aaKnown RBP16.63■□□□□ 0.25
GNE-202ENST00000396594 FBXO2Q9UK22 296 aaPredicted RBP16.63■□□□□ 0.25
GNE-202ENST00000396594 VWDEQ8N2E2 1590 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 CYBBP04839 570 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 AKR1B1P15121 316 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 HSD17B4P51659 736 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 TBCCQ15814 346 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 P3H1Q32P28 736 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 SKA2Q8WVK7 121 aaPredicted RBP16.63■□□□□ 0.25
GNE-202ENST00000396594 UIMC1Q96RL1 719 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 LSM7Q9UK45 103 aaKnown RBP16.63■□□□□ 0.25
GNE-202ENST00000396594 ATP8A1Q9Y2Q0 1164 aa16.63■□□□□ 0.25
GNE-202ENST00000396594 KIF20BQ96Q89 1820 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 KDM1AO60341 852 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 PIGHQ14442 188 aaPredicted RBP16.62■□□□□ 0.25
GNE-202ENST00000396594 HEATR6Q6AI08 1181 aaKnown RBP16.62■□□□□ 0.25
GNE-202ENST00000396594 BANK1Q8NDB2 785 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 SNF8Q96H20 258 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 RRAGDQ9NQL2 400 aaPredicted RBP16.62■□□□□ 0.25
GNE-202ENST00000396594 PTPN22Q9Y2R2 807 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 IGSF9BQ9UPX0 1349 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 ZC3H11AO75152 810 aaKnown RBP eCLIP16.62■□□□□ 0.25
GNE-202ENST00000396594 ALKBH8Q96BT7 664 aaKnown RBP16.62■□□□□ 0.25
GNE-202ENST00000396594 FSD1LQ9BXM9 530 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 SOWAHDA6NJG2 315 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 SLC16A4O15374 487 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 ECM2O94769 699 aaPredicted RBP16.62■□□□□ 0.25
GNE-202ENST00000396594 NR1D1P20393 614 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 FAM213AQ9BRX8 229 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 MAF1Q9H063 256 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 FAM49AQ9H0Q0 323 aaPredicted RBP16.62■□□□□ 0.25
GNE-202ENST00000396594 GOLGA8TH3BQL2 631 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 COPEO14579 308 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 GSTA4O15217 222 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 PCSK1P29120 753 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 ROR1Q01973 937 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 NRBF2Q96F24 287 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 TRIM55Q9BYV6 548 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 SLC13A4Q9UKG4 626 aa16.62■□□□□ 0.25
GNE-202ENST00000396594 SYNJ2BP-COX16A0A087WUM0 186 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 POTEMA6NI47 508 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 TNPO2O14787 897 aaKnown RBP16.61■□□□□ 0.25
GNE-202ENST00000396594 FGGP02679 453 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 SERPINB9P50453 376 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 NGRNQ9NPE2 291 aaKnown RBP16.61■□□□□ 0.25
GNE-202ENST00000396594 COX16Q9P0S2 106 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 BAIAP2L1Q9UHR4 511 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 PYCARDQ9ULZ3 195 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 POTEB3A0JP26 581 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 POTECB2RU33 542 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 M0QYV0 167 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 GTF2A2P52657 109 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 STAT4Q14765 748 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 NBPF9Q3BBW0 867 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 POTEBQ6S5H4 581 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 SMYD4Q8IYR2 804 aaPredicted RBP16.61■□□□□ 0.25
GNE-202ENST00000396594 ADAMTS1Q9UHI8 967 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 ESRRGP62508 458 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 CCDC144BQ3MJ40 725 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 TMEM270Q6UE05 265 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 TSPAN17Q96FV3 270 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 FTOQ9C0B1 505 aaKnown RBP eCLIP16.61■□□□□ 0.25
GNE-202ENST00000396594 PDE11AQ9HCR9 933 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 LRRC53A6NM62 1247 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 E9PMD0 336 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 SERPINB4P48594 390 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 MICALL2Q8IY33 904 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 IGDCC4Q8TDY8 1250 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 MXRA8Q9BRK3 442 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 CNOT7Q9UIV1 285 aaKnown RBP16.61■□□□□ 0.25
GNE-202ENST00000396594 FTCDO95954 541 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 PSMC1P62191 440 aaKnown RBP16.61■□□□□ 0.25
GNE-202ENST00000396594 PHEXP78562 749 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
GNE-202ENST00000396594 DRAP1Q14919 205 aaPredicted RBP16.61■□□□□ 0.25
GNE-202ENST00000396594 ZNF484Q5JVG2 852 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 ACRBPQ8NEB7 543 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 USP13Q92995 863 aaPredicted RBP16.61■□□□□ 0.25
GNE-202ENST00000396594 AGPAT1Q99943 283 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 MOV10L1Q9BXT6 1211 aaKnown RBP16.61■□□□□ 0.25
GNE-202ENST00000396594 MROH8Q9H579 483 aa16.61■□□□□ 0.25
GNE-202ENST00000396594 BBS9Q3SYG4 887 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 USP17L6PQ6QN14 398 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 GPBP1L1Q9HC44 474 aaPredicted RBP16.6■□□□□ 0.25
GNE-202ENST00000396594 GDAQ9Y2T3 454 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 CAPN7Q9Y6W3 813 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 TXNDC9O14530 226 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 C4orf50Q6ZRC1 276 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 RHPN2Q8IUC4 686 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 ANKRD13CQ8N6S4 541 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 GMCL1P1Q8NEA9 526 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 TRIM9Q9C026 710 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 RIMS1Q86UR5 1692 aaKnown RBP16.6■□□□□ 0.25
GNE-202ENST00000396594 SNX2O60749 519 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 COBLO75128 1261 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 TXNP10599 105 aaKnown RBP16.6■□□□□ 0.25
GNE-202ENST00000396594 RPA1P27694 616 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 BTBD8Q5XKL5 378 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 GRAMD1CQ8IYS0 662 aa16.6■□□□□ 0.25
GNE-202ENST00000396594 SCYL3Q8IZE3 742 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms