RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 KRT5P13647 590 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 PRLRP16471 622 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 RDXP35241 583 aaKnown RBP10.02□□□□□ -0.81
NDE1-201ENST00000396354 IRX3P78415 501 aaPredicted RBP10.02□□□□□ -0.81
NDE1-201ENST00000396354 MYL7Q01449 175 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 ITGB3BPQ13352 177 aaPredicted RBP10.02□□□□□ -0.81
NDE1-201ENST00000396354 SLC29A2Q14542 456 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 RASA3Q14644 834 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 EPHA7Q15375 998 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 B4GALNT4Q76KP1 1039 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 CCDC13Q8IYE1 715 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 RAPGEF5Q92565 580 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 DHX38Q92620 1227 aaKnown RBP10.02□□□□□ -0.81
NDE1-201ENST00000396354 SLC5A5Q92911 643 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 ELAC2Q9BQ52 826 aaKnown RBP10.02□□□□□ -0.81
NDE1-201ENST00000396354 CBWD1Q9BRT8 395 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 PI4K2AQ9BTU6 479 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 SEMA4AQ9H3S1 761 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 MYOZ2Q9NPC6 264 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 TMOD2Q9NZR1 351 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 BAIAP2L1Q9UHR4 511 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 COG5Q9UP83 839 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 ARHGEF35A5YM69 484 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 TBX3O15119 743 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 LONRF1Q17RB8 773 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 B3GNT9Q6UX72 402 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 OGFOD1Q8N543 542 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 CCDC26Q8TAB7 109 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 WHAMMQ8TF30 809 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 LRRC45Q96CN5 670 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 FAM20AQ96MK3 541 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 GLT8D2Q9H1C3 349 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 NUCKS1Q9H1E3 243 aaKnown RBP10.02□□□□□ -0.81
NDE1-201ENST00000396354 PARVGQ9HBI0 331 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 TOPORSQ9NS56 1045 aaPredicted RBP10.02□□□□□ -0.81
NDE1-201ENST00000396354 AIPL1Q9NZN9 384 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 USTQ9Y2C2 406 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 DAAM1Q9Y4D1 1078 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 PARP14Q460N5 1801 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 EMSYQ7Z589 1322 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 CYP26A1O43174 497 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 PPP1R7Q15435 360 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 DCAF12L1Q5VU92 463 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 DLK2Q6UY11 383 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 C1orf186Q6ZWK4 172 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 PASD1Q8IV76 773 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 DAW1Q8N136 415 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 TACO1Q9BSH4 297 aaKnown RBP10.01□□□□□ -0.81
NDE1-201ENST00000396354 ZNF577Q9BSK1 485 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 WDR11Q9BZH6 1224 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 INTS2Q9H0H0 1204 aaKnown RBP10.01□□□□□ -0.81
NDE1-201ENST00000396354 ISCUQ9H1K1 167 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 DDX20Q9UHI6 824 aaKnown RBP10.01□□□□□ -0.81
NDE1-201ENST00000396354 GMNCA6NCL1 334 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 F8VZ95 297 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 FOSP01100 380 aaPredicted RBP10.01□□□□□ -0.81
NDE1-201ENST00000396354 POLR2MP0CAP2 368 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 ECHS1P30084 290 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 PSMC2P35998 433 aaKnown RBP10.01□□□□□ -0.81
NDE1-201ENST00000396354 FMO5P49326 533 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 IFI16Q16666 785 aaKnown RBP10.01□□□□□ -0.81
NDE1-201ENST00000396354 PHLDB3Q6NSJ2 640 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 ARHGAP27Q6ZUM4 889 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 NT5DC3Q86UY8 548 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 CCDC50Q8IVM0 306 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 NIM1KQ8IY84 436 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 RPUSD2Q8IZ73 545 aaKnown RBP10.01□□□□□ -0.81
NDE1-201ENST00000396354 CEP89Q96ST8 783 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 PRMT1Q99873 361 aaKnown RBP10.01□□□□□ -0.81
NDE1-201ENST00000396354 TRIM7Q9C029 511 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 TYW1Q9NV66 732 aaKnown RBP10.01□□□□□ -0.81
NDE1-201ENST00000396354 CTNNAL1Q9UBT7 734 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 STK38LQ9Y2H1 464 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 PITPNM2Q9BZ72 1349 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 DOCK5Q9H7D0 1870 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 MYH11P35749 1972 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 MMEP08473 750 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 CREB1P16220 341 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 YBX3P16989 372 aaKnown RBP eCLIP10.01□□□□□ -0.81
NDE1-201ENST00000396354 MARSP56192 900 aaKnown RBP10.01□□□□□ -0.81
NDE1-201ENST00000396354 MAP3K10Q02779 954 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 KDM7AQ6ZMT4 941 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 ZNF662Q6ZS27 426 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 TBC1D1Q86TI0 1168 aaPredicted RBP10.01□□□□□ -0.81
NDE1-201ENST00000396354 ARHGEF19Q8IW93 802 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 LRRC57Q8N9N7 239 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 MTMR14Q8NCE2 650 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 OLIG1Q8TAK6 271 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 LXNQ9BS40 222 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 POLR3CQ9BUI4 534 aaPredicted RBP10.01□□□□□ -0.81
NDE1-201ENST00000396354 TMBIM4Q9HC24 238 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 ASIC3Q9UHC3 531 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 ARIH1Q9Y4X5 557 aaPredicted RBP10.01□□□□□ -0.81
NDE1-201ENST00000396354 RLFQ13129 1914 aa10.01□□□□□ -0.81
NDE1-201ENST00000396354 COL11A1P12107 1806 aaPredicted RBP10□□□□□ -0.81
NDE1-201ENST00000396354 GOLGA6L10A0A0M3HER8 536 aa10□□□□□ -0.81
NDE1-201ENST00000396354 SOCS7O14512 581 aa10□□□□□ -0.81
NDE1-201ENST00000396354 SLC16A4O15374 487 aa10□□□□□ -0.81
NDE1-201ENST00000396354 RGS16O15492 202 aaPredicted RBP10□□□□□ -0.81
NDE1-201ENST00000396354 TBC1D12O60347 775 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms