RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 ZBTB10Q96DT7 871 aa12.01□□□□□ -0.49
CUX1-204ENST00000393824 ANO3Q9BYT9 981 aa12.01□□□□□ -0.49
CUX1-204ENST00000393824 SEMA6BQ9H3T3 888 aa12.01□□□□□ -0.49
CUX1-204ENST00000393824 DNAH12Q6ZR08 3092 aa12.01□□□□□ -0.49
CUX1-204ENST00000393824 CCL15-CCL14A0A0B4J2E2 113 aa12□□□□□ -0.49
CUX1-204ENST00000393824 ENO4A6NNW6 628 aa12□□□□□ -0.49
CUX1-204ENST00000393824 PP2D1A8MPX8 630 aa12□□□□□ -0.49
CUX1-204ENST00000393824 BTNL10A8MVZ5 291 aa12□□□□□ -0.49
CUX1-204ENST00000393824 CCDC188H7C350 402 aa12□□□□□ -0.49
CUX1-204ENST00000393824 CCNT1O60563 726 aaKnown RBP12□□□□□ -0.49
CUX1-204ENST00000393824 SERPING1P05155 500 aa12□□□□□ -0.49
CUX1-204ENST00000393824 MMP13P45452 471 aa12□□□□□ -0.49
CUX1-204ENST00000393824 ZNF131P52739 623 aa12□□□□□ -0.49
CUX1-204ENST00000393824 RNASE9P60153 205 aaKnown RBP12□□□□□ -0.49
CUX1-204ENST00000393824 PPARDQ03181 441 aa12□□□□□ -0.49
CUX1-204ENST00000393824 CCL15Q16663 113 aa12□□□□□ -0.49
CUX1-204ENST00000393824 KRT25Q7Z3Z0 450 aa12□□□□□ -0.49
CUX1-204ENST00000393824 RASAL3Q86YV0 1011 aa12□□□□□ -0.49
CUX1-204ENST00000393824 GUF1Q8N442 669 aaKnown RBP12□□□□□ -0.49
CUX1-204ENST00000393824 IL31RAQ8NI17 732 aa12□□□□□ -0.49
CUX1-204ENST00000393824 ATXN2LQ8WWM7 1075 aaKnown RBP12□□□□□ -0.49
CUX1-204ENST00000393824 TAF4BQ92750 862 aa12□□□□□ -0.49
CUX1-204ENST00000393824 LRRC27Q9C0I9 530 aa12□□□□□ -0.49
CUX1-204ENST00000393824 SAMD15Q9P1V8 674 aa12□□□□□ -0.49
CUX1-204ENST00000393824 RBPJLQ9UBG7 517 aa12□□□□□ -0.49
CUX1-204ENST00000393824 GOLGA6L10A0A0M3HER8 536 aa12□□□□□ -0.49
CUX1-204ENST00000393824 FAM86B1E9PN63 330 aa12□□□□□ -0.49
CUX1-204ENST00000393824 AP1G2O75843 785 aa12□□□□□ -0.49
CUX1-204ENST00000393824 FAM86B2P0C5J1 330 aa12□□□□□ -0.49
CUX1-204ENST00000393824 LINGO3P0C6S8 592 aa12□□□□□ -0.49
CUX1-204ENST00000393824 CHN1P15882 459 aa12□□□□□ -0.49
CUX1-204ENST00000393824 DNA2P51530 1060 aa12□□□□□ -0.49
CUX1-204ENST00000393824 ZNF157P51786 506 aaPredicted RBP12□□□□□ -0.49
CUX1-204ENST00000393824 RPS6KA3P51812 740 aa12□□□□□ -0.49
CUX1-204ENST00000393824 RPS6P62753 249 aaKnown RBP12□□□□□ -0.49
CUX1-204ENST00000393824 RPS6KA1Q15418 735 aa12□□□□□ -0.49
CUX1-204ENST00000393824 SLC18A3Q16572 532 aa12□□□□□ -0.49
CUX1-204ENST00000393824 GALNTL6Q49A17 601 aa12□□□□□ -0.49
CUX1-204ENST00000393824 KLHL23Q8NBE8 558 aa12□□□□□ -0.49
CUX1-204ENST00000393824 LRRC15Q8TF66 581 aa12□□□□□ -0.49
CUX1-204ENST00000393824 PGM2Q96G03 612 aa12□□□□□ -0.49
CUX1-204ENST00000393824 TXLNGYQ9BZA5 131 aa12□□□□□ -0.49
CUX1-204ENST00000393824 HOXC10Q9NYD6 342 aa12□□□□□ -0.49
CUX1-204ENST00000393824 STK17AQ9UEE5 414 aa12□□□□□ -0.49
CUX1-204ENST00000393824 PACSIN2Q9UNF0 486 aaPredicted RBP12□□□□□ -0.49
CUX1-204ENST00000393824 AGAP1Q9UPQ3 857 aa12□□□□□ -0.49
CUX1-204ENST00000393824 PIK3CDO00329 1044 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 ZBED4O75132 1171 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 PPFIA2O75334 1257 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 MMEP08473 750 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 RARAP10276 462 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 ALDH5A1P51649 535 aaPredicted RBP11.99□□□□□ -0.49
CUX1-204ENST00000393824 USP11P51784 963 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 NCALDP61601 193 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 PSMD2Q13200 908 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 GRM1Q13255 1194 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 MTA1Q13330 715 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 TDRD12Q587J7 1177 aaKnown RBP11.99□□□□□ -0.49
CUX1-204ENST00000393824 UNC13DQ70J99 1090 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 NEK8Q86SG6 692 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 HOOK3Q86VS8 718 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 TEX9Q8N6V9 391 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 CALML4Q96GE6 196 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 SLITRK6Q9H5Y7 841 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 RNF146Q9NTX7 359 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 ASTN1O14525 1302 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 FAM155AB1AL88 458 aaPredicted RBP11.99□□□□□ -0.49
CUX1-204ENST00000393824 PDHXO00330 501 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 IGF2BP3O00425 579 aaKnown RBP eCLIP11.99□□□□□ -0.49
CUX1-204ENST00000393824 KCNK3O14649 394 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 TLR2O60603 784 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 KIF4AO95239 1232 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 ZBTB48P10074 688 aaPredicted RBP11.99□□□□□ -0.49
CUX1-204ENST00000393824 FCER1AP12319 257 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 STAT3P40763 770 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 RAB27AP51159 221 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 HSD17B4P51659 736 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 KCNJ2P63252 427 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 DHX9Q08211 1270 aaKnown RBP11.99□□□□□ -0.49
CUX1-204ENST00000393824 THEMIS2Q5TEJ8 643 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 NSMFQ6X4W1 530 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 SV2BQ7L1I2 683 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 LRRC34Q8IZ02 419 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 GBP7Q8N8V2 638 aaPredicted RBP11.99□□□□□ -0.49
CUX1-204ENST00000393824 KIAA0895Q8NCT3 520 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 TEX13BQ9BXU2 312 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 ADAM7Q9H2U9 754 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 FAM114A2Q9NRY5 505 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 CEP72Q9P209 647 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 ZFATQ9P243 1243 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 PNMA2Q9UL42 364 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 TRPM7Q96QT4 1865 aa11.99□□□□□ -0.49
CUX1-204ENST00000393824 DAPK3O43293 454 aa11.98□□□□□ -0.49
CUX1-204ENST00000393824 TOMM70O94826 608 aa11.98□□□□□ -0.49
CUX1-204ENST00000393824 NUDT17P0C025 328 aa11.98□□□□□ -0.49
CUX1-204ENST00000393824 NEFHP12036 1026 aa11.98□□□□□ -0.49
CUX1-204ENST00000393824 FERP16591 822 aa11.98□□□□□ -0.49
CUX1-204ENST00000393824 YY1P25490 414 aa11.98□□□□□ -0.49
CUX1-204ENST00000393824 ABL2P42684 1182 aa11.98□□□□□ -0.49
CUX1-204ENST00000393824 HTRA3P83110 453 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms