RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 BCL7CQ8WUZ0 217 aaPredicted RBP8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 POF1BQ8WVV4 589 aa8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 MRPL38Q96DV4 380 aaKnown RBP8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 DRC1Q96MC2 740 aa8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 ZNF396Q96N95 335 aaPredicted RBP8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 TRIM6Q9C030 488 aaPredicted RBP8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 CCSER1Q9C0I3 900 aa8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 C2orf40Q9H1Z8 148 aa8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 CXCL16Q9H2A7 254 aa8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 ZHX3Q9H4I2 956 aa8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 RSAD1Q9HA92 442 aa8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 KMT5AQ9NQR1 393 aa8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 PRMT7Q9NVM4 692 aaPredicted RBP8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 KLK14Q9P0G3 267 aa8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 CACNG4Q9UBN1 327 aa8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 DNAJB4Q9UDY4 337 aa8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 RWDD3Q9Y3V2 267 aa8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 A0A0C4DFX4 3053 aa8.46□□□□□ -1.06
HMGB3P1-201ENST00000393368 A0A1B0GUA9 196 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 ARL5CA6NH57 179 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 F8W810 466 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 ACKR2O00590 384 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 FGF18O76093 207 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 DDHD2O94830 711 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 BRD1O95696 1058 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 KRT18P05783 430 aaKnown RBP8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 RB1P06400 928 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 HARSP12081 509 aaKnown RBP8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 SKIP12755 728 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 PLS3P13797 630 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 LAG3P18627 525 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 AXLP30530 894 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 SCNN1GP51170 649 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 BCAR1P56945 870 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 NCBP1Q09161 790 aaKnown RBP8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 PTPROQ16827 1216 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 TPRNQ4KMQ1 711 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 NAALADL2Q58DX5 795 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 SLC27A1Q6PCB7 646 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 SHC4Q6S5L8 630 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 KCNT2Q6UVM3 1135 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 DYMQ7RTS9 669 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 ADGRD2Q7Z7M1 963 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 ZBTB33Q86T24 672 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 LARP4BQ92615 738 aaKnown RBP8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 RABGGTAQ92696 567 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 STAMQ92783 540 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 PGBD4Q96DM1 585 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 CCDC51Q96ER9 411 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 ZNF558Q96NG5 402 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 GAD1Q99259 594 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 PLVAPQ9BX97 442 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 NRDE2Q9H7Z3 1164 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 MIOSQ9NXC5 875 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 SNTG2Q9NY99 539 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 PARP2Q9UGN5 583 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 PCDHB12Q9Y5F1 795 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 PHLPP2Q6ZVD8 1323 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 FNDC1Q4ZHG4 1894 aaPredicted RBP8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 NLRC5Q86WI3 1866 aa8.45□□□□□ -1.06
HMGB3P1-201ENST00000393368 MYMKA6NI61 221 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 K7ERI5 159 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 N4BP3O15049 544 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 LINC01565O15544 149 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 SLC26A4O43511 780 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 FAM13AO94988 1023 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 YEATS4O95619 227 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 TXLNAP40222 546 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 SLC11A1P49279 550 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 KCNQ1P51787 676 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 EFNA5P52803 228 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 ERVFC1P60507 584 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 OSTNP61366 133 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 RBM10P98175 930 aaKnown RBP8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 RNASELQ05823 741 aaKnown RBP8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 HYAL1Q12794 435 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 GIT2Q14161 759 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 PCBP1Q15365 356 aaKnown RBP eCLIP8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 FAM187BQ17R55 369 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 TIGD5Q53EQ6 642 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 AXDND1Q5T1B0 1012 aaPredicted RBP8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 ATF7IP2Q5U623 682 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 RRAGBQ5VZM2 374 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 PLPP4Q5VZY2 271 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 FAM43BQ6ZT52 329 aaPredicted RBP8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 EP400NLQ6ZTU2 488 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 RBM23Q86U06 439 aaKnown RBP8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 SLC39A11Q8N1S5 342 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 MYCT1Q8N699 235 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 CEP120Q8N960 986 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 TMEM161BQ8NDZ6 487 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 URGCPQ8TCY9 931 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 AUTS2Q8WXX7 1259 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 P2RX5Q93086 422 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 ZBTB45Q96K62 511 aaPredicted RBP8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 PRIMPOLQ96LW4 560 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 TARS2Q9BW92 718 aaKnown RBP8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 MRPL9Q9BYD2 267 aaKnown RBP8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 IKZF4Q9H2S9 585 aa8.44□□□□□ -1.06
HMGB3P1-201ENST00000393368 NSUN3Q9H649 340 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms