RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 POTEMA6NI47 508 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 TCP10L2B9ZVM9 353 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 SMARCA1P28370 1054 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 KCNJ6P48051 423 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 P3H1Q32P28 736 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 RAD9BQ6WBX8 426 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 SGSM3Q96HU1 749 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 GPR108Q9NPR9 543 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 ETAA1Q9NY74 926 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 KLHL8Q9P2G9 620 aaPredicted RBP17.11■□□□□ 0.33
SHANK1-204ENST00000391814 TSR3Q9UJK0 312 aaKnown RBP17.11■□□□□ 0.33
SHANK1-204ENST00000391814 SMG5Q9UPR3 1016 aaKnown RBP17.11■□□□□ 0.33
SHANK1-204ENST00000391814 TFDP1Q14186 410 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 MAPRE2Q15555 327 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 KYNUQ16719 465 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 ZNF394Q53GI3 561 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 MIS18BP1Q6P0N0 1132 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 ARHGAP22Q7Z5H3 698 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 HEATR4Q86WZ0 1026 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 TTC13Q8NBP0 860 aa17.11■□□□□ 0.33
SHANK1-204ENST00000391814 A0A1W2PQC6 194 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 GCLMP48507 274 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 ITIH4Q14624 930 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 RWDD4Q6NW29 188 aaKnown RBP17.1■□□□□ 0.33
SHANK1-204ENST00000391814 RFWD2Q8NHY2 731 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 CEP170P1Q96L14 293 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 RPS6KC1Q96S38 1066 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 AMNQ9BXJ7 453 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 C20orf96Q9NUD7 363 aaPredicted RBP17.1■□□□□ 0.33
SHANK1-204ENST00000391814 FAM8A1Q9UBU6 413 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 FAM47DPA6NHR8 397 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 DGKIO75912 1065 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 TTLL1O95922 423 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 FCER1AP12319 257 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 KPNB1Q14974 876 aaKnown RBP17.1■□□□□ 0.33
SHANK1-204ENST00000391814 SZRD1Q7Z422 152 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 TBC1D10CQ8IV04 446 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 PIGOQ8TEQ8 1089 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 DYNLL2Q96FJ2 89 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 FUT8Q9BYC5 575 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 CYP26B1Q9NR63 512 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 PAPOLBQ9NRJ5 636 aaKnown RBP17.1■□□□□ 0.33
SHANK1-204ENST00000391814 HAO1Q9UJM8 370 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 CFAP74Q9C0B2 1584 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 USP17L3A6NCW0 530 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 USP17L4A6NCW7 530 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 AIM2O14862 343 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 MYCP01106 439 aaPredicted RBP17.1■□□□□ 0.33
SHANK1-204ENST00000391814 GYS1P13807 737 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 USP17L1Q7RTZ2 530 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 TAGAPQ8N103 731 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 SH3GLB2Q9NR46 395 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 TFR2Q9UP52 801 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 WDR62O43379 1518 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 OSBPP22059 807 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 LVRNQ6Q4G3 990 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 DDX42Q86XP3 938 aaKnown RBP eCLIP17.1■□□□□ 0.33
SHANK1-204ENST00000391814 CLEC4FQ8N1N0 589 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 BBS5Q8N3I7 341 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 CAAP1Q9H8G2 361 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 HERC5Q9UII4 1024 aaKnown RBP17.1■□□□□ 0.33
SHANK1-204ENST00000391814 HIF1AQ16665 826 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 TTC8Q8TAM2 541 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 TBC1D22AQ8WUA7 517 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 C11orf70Q9BRQ4 267 aa17.1■□□□□ 0.33
SHANK1-204ENST00000391814 ATP10BO94823 1461 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 MLH3Q9UHC1 1453 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 TC2NQ8N9U0 490 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 MPP4Q96JB8 637 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 MTO1Q9Y2Z2 717 aaKnown RBP17.09■□□□□ 0.33
SHANK1-204ENST00000391814 CAB39Q9Y376 341 aaPredicted RBP17.09■□□□□ 0.33
SHANK1-204ENST00000391814 NR1I3Q14994 352 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 SLC35G2Q8TBE7 412 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 PPP1R16BQ96T49 567 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 IP6K2Q9UHH9 426 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 AKT3Q9Y243 479 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 ABCA5Q8WWZ7 1642 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 TRIM25Q14258 630 aaKnown RBP17.09■□□□□ 0.33
SHANK1-204ENST00000391814 CELF4Q9BZC1 486 aaKnown RBP17.09■□□□□ 0.33
SHANK1-204ENST00000391814 EML4Q9HC35 981 aaKnown RBP17.09■□□□□ 0.33
SHANK1-204ENST00000391814 PIH1D3Q9NQM4 214 aaKnown RBP17.09■□□□□ 0.33
SHANK1-204ENST00000391814 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.09■□□□□ 0.33
SHANK1-204ENST00000391814 ABCC10Q5T3U5 1492 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 PP2D1A8MPX8 630 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 KLK7P49862 253 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 DEPDC1Q5TB30 811 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 ANKRD40Q6AI12 368 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 XPAP23025 273 aaPredicted RBP17.09■□□□□ 0.33
SHANK1-204ENST00000391814 CLMNQ96JQ2 1002 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 ATP6V0A4Q9HBG4 840 aa17.09■□□□□ 0.33
SHANK1-204ENST00000391814 PDE8BO95263 885 aa17.08■□□□□ 0.33
SHANK1-204ENST00000391814 CYP2E1P05181 493 aaPredicted RBP17.08■□□□□ 0.33
SHANK1-204ENST00000391814 FASTKD1Q53R41 847 aaKnown RBP17.08■□□□□ 0.33
SHANK1-204ENST00000391814 GLYCTKQ8IVS8 523 aa17.08■□□□□ 0.33
SHANK1-204ENST00000391814 NEUROG2Q9H2A3 272 aa17.08■□□□□ 0.33
SHANK1-204ENST00000391814 PCSK1NQ9UHG2 260 aa17.08■□□□□ 0.33
SHANK1-204ENST00000391814 ATP10DQ9P241 1426 aa17.08■□□□□ 0.33
SHANK1-204ENST00000391814 C16orf96A6NNT2 1141 aa17.08■□□□□ 0.33
SHANK1-204ENST00000391814 ATP9AO75110 1047 aa17.08■□□□□ 0.33
SHANK1-204ENST00000391814 CDC27P30260 824 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms