RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 PTPDC1A2A3K4 754 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 B4E1Z4 1266 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 DIRC3C9JPN6 131 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 H7C1D1 291 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 M0R2C6 588 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 DVL2O14641 736 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 MGST3O14880 152 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 MTSS1O43312 755 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 OPHN1O60890 802 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 RBMXL2O75526 392 aaKnown RBP0.91□□□□□ -2.26
SNORD28-201ENST00000384706 PRPF6O94906 941 aaKnown RBP0.91□□□□□ -2.26
SNORD28-201ENST00000384706 ZFPL1O95159 310 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 PCDH8O95206 1070 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 FOSP01100 380 aaPredicted RBP0.91□□□□□ -2.26
SNORD28-201ENST00000384706 CYP17A1P05093 508 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 SPATA31D3P0C874 917 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 GAAP10253 952 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 RBP3P10745 1247 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 ZSCAN20P17040 1043 aaPredicted RBP0.91□□□□□ -2.26
SNORD28-201ENST00000384706 SLC9A1P19634 815 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 POU3F3P20264 500 aaPredicted RBP0.91□□□□□ -2.26
SNORD28-201ENST00000384706 FNTBP49356 437 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 RARRES1P49788 294 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 WNT3AP56704 352 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 BLOC1S1P78537 153 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 SIM1P81133 766 aaPredicted RBP0.91□□□□□ -2.26
SNORD28-201ENST00000384706 MXRA7P84157 204 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 APBA1Q02410 837 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 DUSP2Q05923 314 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 MAPK7Q13164 816 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 MYBPC3Q14896 1274 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 ZNF169Q14929 603 aaPredicted RBP0.91□□□□□ -2.26
SNORD28-201ENST00000384706 ZNF174Q15697 407 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 SRSF7Q16629 238 aaKnown RBP eCLIP0.91□□□□□ -2.26
SNORD28-201ENST00000384706 SPDYE7PQ495Y7 208 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 METTL24Q5JXM2 366 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 PIK3R6Q5UE93 754 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 ANKS6Q68DC2 871 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 ZNF425Q6IV72 752 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 EFCAB12Q6NXP0 572 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 SPATA31D4Q6ZUB0 917 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 FGD2Q7Z6J4 655 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 GPR149Q86SP6 731 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 NME9Q86XW9 330 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 PLXDC1Q8IUK5 500 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 SYT12Q8IV01 421 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 SH2D3CQ8N5H7 860 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 C7orf31Q8N865 590 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 KIAA1958Q8N8K9 716 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 Q8N9P0 234 aaPredicted RBP0.91□□□□□ -2.26
SNORD28-201ENST00000384706 RNF169Q8NCN4 708 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 PIK3C3Q8NEB9 887 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 OR10H5Q8NGA6 315 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 DDB2Q92466 427 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 WASF1Q92558 559 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 SLC9A6Q92581 669 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 ANKS1AQ92625 1134 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 TFAP2CQ92754 450 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 ZNF669Q96BR6 464 aaPredicted RBP0.91□□□□□ -2.26
SNORD28-201ENST00000384706 ZBTB9Q96C00 473 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 SCLYQ96I15 445 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 HIST1H2AHQ96KK5 128 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 HIST1H2AJQ99878 128 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 ADAM2Q99965 735 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 MYL10Q9BUA6 226 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 HIRIP3Q9BW71 556 aaPredicted RBP0.91□□□□□ -2.26
SNORD28-201ENST00000384706 OSBPL6Q9BZF3 934 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 ENKD1Q9H0I2 346 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 KLK15Q9H2R5 256 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 POFUT1Q9H488 388 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 CASS4Q9NQ75 786 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 SEMA4GQ9NTN9 838 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 ASB6Q9NWX5 421 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 PODXL2Q9NZ53 605 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 SAMD15Q9P1V8 674 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 USP36Q9P275 1121 aaKnown RBP0.91□□□□□ -2.26
SNORD28-201ENST00000384706 LRIT1Q9P2V4 623 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 DKK2Q9UBU2 259 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 USP18Q9UMW8 372 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 CLCA2Q9UQC9 943 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 ATP11BQ9Y2G3 1177 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 CHST2Q9Y4C5 530 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 FPGT-TNNI3KV9GXZ4 949 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 ZMYM3Q14202 1370 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 KAT6AQ92794 2004 aa0.91□□□□□ -2.26
SNORD28-201ENST00000384706 MAST3O60307 1309 aa0.9□□□□□ -2.26
SNORD28-201ENST00000384706 MYPNQ86TC9 1320 aa0.9□□□□□ -2.26
SNORD28-201ENST00000384706 ZBTB7CA1YPR0 619 aa0.9□□□□□ -2.27
SNORD28-201ENST00000384706 UNCXA6NJT0 531 aa0.9□□□□□ -2.27
SNORD28-201ENST00000384706 CGB1A6NKQ9 187 aa0.9□□□□□ -2.27
SNORD28-201ENST00000384706 DRGXA6NNA5 263 aa0.9□□□□□ -2.27
SNORD28-201ENST00000384706 TBKBP1A7MCY6 615 aa0.9□□□□□ -2.27
SNORD28-201ENST00000384706 C1QL1O75973 258 aa0.9□□□□□ -2.27
SNORD28-201ENST00000384706 GLRX3O76003 335 aaKnown RBP0.9□□□□□ -2.27
SNORD28-201ENST00000384706 CDKL5O76039 1030 aa0.9□□□□□ -2.27
SNORD28-201ENST00000384706 NPTXRO95502 500 aa0.9□□□□□ -2.27
SNORD28-201ENST00000384706 LY86O95711 162 aa0.9□□□□□ -2.27
SNORD28-201ENST00000384706 BMP15O95972 392 aa0.9□□□□□ -2.27
SNORD28-201ENST00000384706 HOXB6P17509 224 aaKnown RBP0.9□□□□□ -2.27
SNORD28-201ENST00000384706 FDXRP22570 491 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms