RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 KANSL3Q9P2N6 904 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.16■□□□□ 0.82
CD9-204ENST00000382519 STK24Q9Y6E0 443 aa20.16■□□□□ 0.82
CD9-204ENST00000382519 C2orf71A6NGG8 1288 aa20.15■□□□□ 0.82
CD9-204ENST00000382519 PP2D1A8MPX8 630 aa20.15■□□□□ 0.82
CD9-204ENST00000382519 DDHD2O94830 711 aa20.15■□□□□ 0.82
CD9-204ENST00000382519 NPTXRO95502 500 aa20.15■□□□□ 0.82
CD9-204ENST00000382519 EYA4O95677 639 aa20.15■□□□□ 0.82
CD9-204ENST00000382519 LIG1P18858 919 aa20.15■□□□□ 0.82
CD9-204ENST00000382519 PRPHP41219 470 aa20.15■□□□□ 0.82
CD9-204ENST00000382519 KRT79Q5XKE5 535 aa20.15■□□□□ 0.82
CD9-204ENST00000382519 CDCA2Q69YH5 1023 aaPredicted RBP20.15■□□□□ 0.82
CD9-204ENST00000382519 SLC27A1Q6PCB7 646 aa20.15■□□□□ 0.82
CD9-204ENST00000382519 DTHD1Q6ZMT9 781 aa20.15■□□□□ 0.82
CD9-204ENST00000382519 DEPTORQ8TB45 409 aa20.15■□□□□ 0.82
CD9-204ENST00000382519 POP1Q99575 1024 aaKnown RBP20.15■□□□□ 0.82
CD9-204ENST00000382519 ZBP1Q9H171 429 aa20.15■□□□□ 0.82
CD9-204ENST00000382519 C2orf40Q9H1Z8 148 aa20.15■□□□□ 0.82
CD9-204ENST00000382519 RNF39Q9H2S5 420 aa20.15■□□□□ 0.82
CD9-204ENST00000382519 NXF3Q9H4D5 531 aaKnown RBP20.15■□□□□ 0.82
CD9-204ENST00000382519 PRMT7Q9NVM4 692 aaPredicted RBP20.15■□□□□ 0.82
CD9-204ENST00000382519 USP15Q9Y4E8 981 aaPredicted RBP20.15■□□□□ 0.82
CD9-204ENST00000382519 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.14■□□□□ 0.81
CD9-204ENST00000382519 ARL5CA6NH57 179 aa20.14■□□□□ 0.81
CD9-204ENST00000382519 PPP2R5AQ15172 486 aa20.14■□□□□ 0.81
CD9-204ENST00000382519 PPP4R3CPQ6ZMV5 832 aa20.14■□□□□ 0.81
CD9-204ENST00000382519 DDX53Q86TM3 631 aaKnown RBP20.14■□□□□ 0.81
CD9-204ENST00000382519 MRPL43Q8N983 215 aaKnown RBP20.14■□□□□ 0.81
CD9-204ENST00000382519 TMEM87AQ8NBN3 555 aa20.14■□□□□ 0.81
CD9-204ENST00000382519 AUTS2Q8WXX7 1259 aa20.14■□□□□ 0.81
CD9-204ENST00000382519 PRIMPOLQ96LW4 560 aa20.14■□□□□ 0.81
CD9-204ENST00000382519 ZFP42Q96MM3 310 aa20.14■□□□□ 0.81
CD9-204ENST00000382519 GAD1Q99259 594 aa20.14■□□□□ 0.81
CD9-204ENST00000382519 TMEM175Q9BSA9 504 aa20.14■□□□□ 0.81
CD9-204ENST00000382519 CXCL14O95715 111 aa20.13■□□□□ 0.81
CD9-204ENST00000382519 CDC25AP30304 524 aa20.13■□□□□ 0.81
CD9-204ENST00000382519 NAMPTP43490 491 aa20.13■□□□□ 0.81
CD9-204ENST00000382519 SCNN1GP51170 649 aa20.13■□□□□ 0.81
CD9-204ENST00000382519 ZRSR1Q15695 479 aaKnown RBP20.13■□□□□ 0.81
CD9-204ENST00000382519 IL17AQ16552 155 aa20.13■□□□□ 0.81
CD9-204ENST00000382519 IFT74Q96LB3 600 aa20.13■□□□□ 0.81
CD9-204ENST00000382519 POLD4Q9HCU8 107 aa20.13■□□□□ 0.81
CD9-204ENST00000382519 FAN1Q9Y2M0 1017 aa20.13■□□□□ 0.81
CD9-204ENST00000382519 A0A1B0GUA9 196 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 C19orf67A6NJJ6 358 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 E9PMD0 336 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 CLASP2O75122 1294 aaKnown RBP20.12■□□□□ 0.81
CD9-204ENST00000382519 PRKCBP05771 671 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 CTSAP10619 480 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 AKAP5P24588 427 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 ATP2C1P98194 919 aaPredicted RBP20.12■□□□□ 0.81
CD9-204ENST00000382519 PRPF4BQ13523 1007 aaKnown RBP20.12■□□□□ 0.81
CD9-204ENST00000382519 KCNC3Q14003 757 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 MAPK6Q16659 721 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 FAM187BQ17R55 369 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 LARP1BQ659C4 914 aaKnown RBP20.12■□□□□ 0.81
CD9-204ENST00000382519 ANKRD54Q6NXT1 300 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 KIFAP3Q92845 792 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 KIFC3Q9BVG8 833 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 APOL5Q9BWW9 433 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 VN1R3Q9BXE9 311 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 FZD8Q9H461 694 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 PARP2Q9UGN5 583 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 DNM3Q9UQ16 869 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 GIT1Q9Y2X7 761 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 PRG3Q9Y2Y8 225 aaPredicted RBP20.12■□□□□ 0.81
CD9-204ENST00000382519 MYH11P35749 1972 aa20.12■□□□□ 0.81
CD9-204ENST00000382519 PI4K2BG5E9Z4 385 aa20.11■□□□□ 0.81
CD9-204ENST00000382519 NRP1O14786 923 aa20.11■□□□□ 0.81
CD9-204ENST00000382519 N4BP3O15049 544 aa20.11■□□□□ 0.81
CD9-204ENST00000382519 INPPL1O15357 1258 aa20.11■□□□□ 0.81
CD9-204ENST00000382519 ALDH2P05091 517 aa20.11■□□□□ 0.81
CD9-204ENST00000382519 SSBP05455 408 aaKnown RBP eCLIP20.11■□□□□ 0.81
CD9-204ENST00000382519 OR1G1P47890 313 aa20.11■□□□□ 0.81
CD9-204ENST00000382519 TMEM184AQ6ZMB5 413 aa20.11■□□□□ 0.81
CD9-204ENST00000382519 CASP10Q92851 521 aa20.11■□□□□ 0.81
CD9-204ENST00000382519 CCDC113Q9H0I3 377 aa20.11■□□□□ 0.81
CD9-204ENST00000382519 PDZD7Q9H5P4 517 aa20.11■□□□□ 0.81
CD9-204ENST00000382519 HCFC2Q9Y5Z7 792 aa20.11■□□□□ 0.81
CD9-204ENST00000382519 C5orf42Q9H799 3197 aa20.11■□□□□ 0.81
CD9-204ENST00000382519 VWA3AA6NCI4 1184 aa20.1■□□□□ 0.81
CD9-204ENST00000382519 FAM86C2PA6NEL3 165 aa20.1■□□□□ 0.81
CD9-204ENST00000382519 TTLL13PA6NNM8 815 aa20.1■□□□□ 0.81
CD9-204ENST00000382519 GIT2Q14161 759 aa20.1■□□□□ 0.81
CD9-204ENST00000382519 TMEM31Q5JXX7 168 aa20.1■□□□□ 0.81
CD9-204ENST00000382519 COLGALT2Q8IYK4 626 aa20.1■□□□□ 0.81
CD9-204ENST00000382519 RPS6KC1Q96S38 1066 aa20.1■□□□□ 0.81
CD9-204ENST00000382519 MIOSQ9NXC5 875 aa20.1■□□□□ 0.81
CD9-204ENST00000382519 KLK14Q9P0G3 267 aa20.1■□□□□ 0.81
CD9-204ENST00000382519 NR1I2O75469 434 aa20.09■□□□□ 0.81
CD9-204ENST00000382519 ALADP13716 330 aa20.09■□□□□ 0.81
CD9-204ENST00000382519 COL9A1P20849 921 aa20.09■□□□□ 0.81
CD9-204ENST00000382519 EFNA5P52803 228 aa20.09■□□□□ 0.81
CD9-204ENST00000382519 DSC1Q08554 894 aa20.09■□□□□ 0.81
CD9-204ENST00000382519 PTPN14Q15678 1187 aa20.09■□□□□ 0.81
CD9-204ENST00000382519 SYCE2Q6PIF2 218 aa20.09■□□□□ 0.81
CD9-204ENST00000382519 ADPGKQ9BRR6 497 aa20.09■□□□□ 0.81
CD9-204ENST00000382519 MMTAG2Q9BU76 263 aaKnown RBP20.09■□□□□ 0.81
CD9-204ENST00000382519 RUSC1Q9BVN2 902 aa20.09■□□□□ 0.81
CD9-204ENST00000382519 MARCH5Q9NX47 278 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms