RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 DNAJC10Q8IXB1 793 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 TTLL11Q8NHH1 800 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 PLEKHO2Q8TD55 490 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 STMN2Q93045 179 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 VMP1Q96GC9 406 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 COX4I2Q96KJ9 171 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 ALG1Q9BT22 464 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 ISCUQ9H1K1 167 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 DBF4Q9UBU7 674 aaPredicted RBP9.99□□□□□ -0.81
PTPRA-204ENST00000380393 TLL2Q9Y6L7 1015 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 DISP2A7MBM2 1401 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 TSPY2A6NKD2 308 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 POLR2DO15514 142 aaKnown RBP9.99□□□□□ -0.81
PTPRA-204ENST00000380393 RNF113AO15541 343 aaKnown RBP9.99□□□□□ -0.81
PTPRA-204ENST00000380393 PGM3O95394 542 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 TSPY3P0CV98 308 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 TSPY8P0CW00 308 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 PRCPP42785 496 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 ERVK-9P63128 1117 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 TSPY1Q01534 308 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 PFKPQ01813 784 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 PDIA6Q15084 440 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 NKX1-1Q15270 411 aaPredicted RBP9.99□□□□□ -0.81
PTPRA-204ENST00000380393 SPA17Q15506 151 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 ZNF423Q2M1K9 1284 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 IZUMO2Q6UXV1 221 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 PPP1R14CQ8TAE6 165 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 TBC1D16Q8TBP0 767 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 MGARPQ8TDB4 240 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 GIPC2Q8TF65 315 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 PURBQ96QR8 312 aaKnown RBP9.99□□□□□ -0.81
PTPRA-204ENST00000380393 FNBP1Q96RU3 617 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 COMMD8Q9NX08 183 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 RNASEH1O60930 286 aaKnown RBP9.99□□□□□ -0.81
PTPRA-204ENST00000380393 TMCC2O75069 709 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 TBX10O75333 385 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 RCVRNP35243 200 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 HOXD13P35453 343 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 PPP1R2P41236 205 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 KRT31Q15323 416 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 PPP1R2P3Q6NXS1 205 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 RFPL4BQ6ZWI9 263 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 ANKMY2Q8IV38 441 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 RIN3Q8TB24 985 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 CCDC134Q9H6E4 229 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 ARMC7Q9H6L4 198 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 KRT82Q9NSB4 513 aa9.99□□□□□ -0.81
PTPRA-204ENST00000380393 TRNAU1APQ9NX07 287 aaKnown RBP9.99□□□□□ -0.81
PTPRA-204ENST00000380393 AP3B1O00203 1094 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 WNT7AO00755 349 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 CPA3P15088 417 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 MARK3P27448 753 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 CASP1P29466 404 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 TIMM10P62072 90 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 GFPT1Q06210 699 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-204ENST00000380393 LRRC14Q15048 493 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 CDKAL1Q5VV42 579 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 KLHDC10Q6PID8 442 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 KSR2Q6VAB6 950 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 CCDC81Q6ZN84 652 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 SMYD4Q8IYR2 804 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-204ENST00000380393 INPP5DQ92835 1189 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 ERP27Q96DN0 273 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 ADAM7Q9H2U9 754 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 DDX43Q9NXZ2 648 aaKnown RBP9.98□□□□□ -0.81
PTPRA-204ENST00000380393 HACD3Q9P035 362 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 VILLO15195 856 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 ENO2P09104 434 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-204ENST00000380393 TCEA1P23193 301 aaKnown RBP9.98□□□□□ -0.81
PTPRA-204ENST00000380393 BCAP31P51572 246 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 TNNC1P63316 161 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 UBXN1Q04323 297 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 CUL1Q13616 776 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 TNIP1Q15025 636 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 TGFBIQ15582 683 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 SLC27A3Q5K4L6 730 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 SPDYCQ5MJ68 293 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 USPL1Q5W0Q7 1092 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 SIGIRRQ6IA17 410 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 MICU3Q86XE3 530 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 VPS37DQ86XT2 251 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 SEPT12Q8IYM1 358 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 MYD88Q99836 296 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 MYLK2Q9H1R3 596 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 GID8Q9NWU2 228 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 SERTAD1Q9UHV2 236 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 LRRC37A3O60309 1634 aa9.98□□□□□ -0.81
PTPRA-204ENST00000380393 CFAP69A5D8W1 941 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 NBPF26B4DH59 902 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 ERVV-2B6SEH9 535 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 DNAJC6O75061 913 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 CNOT3O75175 753 aaKnown RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 PABPC1P11940 636 aaKnown RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 EEF2P13639 858 aaKnown RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 ADRA2BP18089 450 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 S100A5P33763 92 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 HSD17B4P51659 736 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 KPNA1P52294 538 aaPredicted RBP9.97□□□□□ -0.81
PTPRA-204ENST00000380393 DSG1Q02413 1049 aa9.97□□□□□ -0.81
PTPRA-204ENST00000380393 RALGDSQ12967 914 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms