RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 PHLDB3Q6NSJ2 640 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 LLGL2Q6P1M3 1020 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 BARGINQ6ZT62 677 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 SEPT14Q6ZU15 432 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 TMC3Q7Z5M5 1100 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 TAB3Q8N5C8 712 aaPredicted RBP13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 ANKS4BQ8N8V4 417 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 KIFC3Q9BVG8 833 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 KCNK9Q9NPC2 374 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 ALG6Q9Y672 507 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 NFS1Q9Y697 457 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 GAKO14976 1311 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 ABCB11O95342 1321 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 KIAA1551Q9HCM1 1747 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 F8VZ95 297 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 K7ENM7 598 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 IGF2BP3O00425 579 aaKnown RBP eCLIP13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 PDXKO00764 312 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 BBOX1O75936 387 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 ARP10275 920 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 MXRA7P84157 204 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 MYL7Q01449 175 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 MTM1Q13496 603 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 TNIP1Q15025 636 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 RC3H1Q5TC82 1133 aaKnown RBP13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 SYDE2Q5VT97 1194 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 RUFY4Q6ZNE9 571 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 C1orf54Q8WWF1 131 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 FAM210AQ96ND0 272 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 INTS2Q9H0H0 1204 aaKnown RBP13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 GPRC5CQ9NQ84 441 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 EMSYQ7Z589 1322 aa13.39□□□□□ -0.27
PRPF40B-202ENST00000380281 A6NHS1 94 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 UBOX5O94941 541 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 CHN1P15882 459 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 PPP1R15BQ5SWA1 713 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 SIAH1Q8IUQ4 282 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 GDAP1Q8TB36 358 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 LENG9Q96B70 501 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 PAIP2Q9BPZ3 127 aaKnown RBP13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 PARVGQ9HBI0 331 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 PICK1Q9NRD5 415 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 TRIM33Q9UPN9 1127 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 SLITRK3O94933 977 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 KRT16P08779 473 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 NQO1P15559 274 aaKnown RBP13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 CREB1P16220 341 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 SMARCA1P28370 1054 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 PRUNE1Q86TP1 453 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 SLC17A8Q8NDX2 589 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 XPO6Q96QU8 1125 aaKnown RBP13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 CSRNP1Q96S65 589 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 CBWD1Q9BRT8 395 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 WDR18Q9BV38 432 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 SCN7AQ01118 1682 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 ABCA3Q99758 1704 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 ARHGEF35A5YM69 484 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 hCG_1984214I3L0E3 225 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 RGS16O15492 202 aaPredicted RBP13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 MMEP08473 750 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 PYGBP11216 843 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 BMP3P12645 472 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 FERP16591 822 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 SOX10P56693 466 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 RIPK1Q13546 671 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 CUL1Q13616 776 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 ZNF268Q14587 947 aaPredicted RBP13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 RRP1BQ14684 758 aaKnown RBP13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 LONRF1Q17RB8 773 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 DENND2CQ68D51 928 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 LMBRD2Q68DH5 695 aaPredicted RBP13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 SH3BP5LQ7L8J4 393 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 ARHGEF19Q8IW93 802 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 CDAN1Q8IWY9 1227 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 LRRC34Q8IZ02 419 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 ZNF713Q8N859 430 aaPredicted RBP13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 CCHCR1Q8TD31 782 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 TEKT4Q8WW24 435 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 ATG4AQ8WYN0 398 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 PSMD1Q99460 953 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 PRMT1Q99873 361 aaKnown RBP13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 HEMGNQ9BXL5 484 aa13.38□□□□□ -0.27
PRPF40B-202ENST00000380281 GOLGA6L10A0A0M3HER8 536 aa13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 ANKRD63C9JTQ0 380 aa13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 CYP26A1O43174 497 aa13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 DGKZQ13574 1117 aa13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 TRPM8Q7Z2W7 1104 aa13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 P3H4Q92791 437 aa13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 TRAF3IP3Q9Y228 551 aa13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 BZW2Q9Y6E2 419 aaKnown RBP13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 IGKV6D-41A0A0C4DH26 115 aa13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 DLATP10515 647 aaKnown RBP13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 ATP2A2P16615 1042 aaKnown RBP13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 JAMLQ86YT9 394 aa13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 ACTRT1Q8TDG2 376 aa13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 DHX38Q92620 1227 aaKnown RBP13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 NAF1Q96HR8 494 aaKnown RBP13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 ZNF577Q9BSK1 485 aa13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 ECT2Q9H8V3 914 aa13.37□□□□□ -0.27
PRPF40B-202ENST00000380281 PRR12Q9ULL5 1215 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms