RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 SLC11A1P49279 550 aa27.28■■□□□ 1.96
TNFRSF4-201ENST00000379236 ZP2Q05996 745 aa27.28■■□□□ 1.96
TNFRSF4-201ENST00000379236 AMHR2Q16671 573 aa27.28■■□□□ 1.96
TNFRSF4-201ENST00000379236 ZNF280BQ86YH2 543 aa27.28■■□□□ 1.96
TNFRSF4-201ENST00000379236 SMRP1Q8NCR6 262 aa27.28■■□□□ 1.96
TNFRSF4-201ENST00000379236 TMEM175Q9BSA9 504 aa27.28■■□□□ 1.96
TNFRSF4-201ENST00000379236 STK39Q9UEW8 545 aa27.28■■□□□ 1.96
TNFRSF4-201ENST00000379236 FAN1Q9Y2M0 1017 aa27.28■■□□□ 1.96
TNFRSF4-201ENST00000379236 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 EYA4O95677 639 aa27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 CXCL14O95715 111 aa27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 ALDH2P05091 517 aa27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 LIG1P18858 919 aa27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 MLH1P40692 756 aa27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 NAMPTP43490 491 aa27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 GIT2Q14161 759 aa27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 LARP1BQ659C4 914 aaKnown RBP27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 CDCA2Q69YH5 1023 aaPredicted RBP27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 DDX53Q86TM3 631 aaKnown RBP27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 TMEM173Q86WV6 379 aaPredicted RBP27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 MRPL43Q8N983 215 aaKnown RBP27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 EPHX3Q9H6B9 360 aa27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 DNM3Q9UQ16 869 aa27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 HES2Q9Y543 173 aa27.27■■□□□ 1.96
TNFRSF4-201ENST00000379236 C2orf71A6NGG8 1288 aa27.26■■□□□ 1.95
TNFRSF4-201ENST00000379236 NR1I2O75469 434 aa27.26■■□□□ 1.95
TNFRSF4-201ENST00000379236 RBM10P98175 930 aaKnown RBP27.26■■□□□ 1.95
TNFRSF4-201ENST00000379236 ECM1Q16610 540 aa27.26■■□□□ 1.95
TNFRSF4-201ENST00000379236 MAPK6Q16659 721 aa27.26■■□□□ 1.95
TNFRSF4-201ENST00000379236 PPP4R3CPQ6ZMV5 832 aa27.26■■□□□ 1.95
TNFRSF4-201ENST00000379236 CDR2LQ86X02 465 aaPredicted RBP27.26■■□□□ 1.95
TNFRSF4-201ENST00000379236 KIFAP3Q92845 792 aa27.26■■□□□ 1.95
TNFRSF4-201ENST00000379236 CASP10Q92851 521 aa27.26■■□□□ 1.95
TNFRSF4-201ENST00000379236 GAD1Q99259 594 aa27.26■■□□□ 1.95
TNFRSF4-201ENST00000379236 ZBP1Q9H171 429 aa27.26■■□□□ 1.95
TNFRSF4-201ENST00000379236 NXF3Q9H4D5 531 aaKnown RBP27.26■■□□□ 1.95
TNFRSF4-201ENST00000379236 GIT1Q9Y2X7 761 aa27.26■■□□□ 1.95
TNFRSF4-201ENST00000379236 ARL5CA6NH57 179 aa27.25■■□□□ 1.95
TNFRSF4-201ENST00000379236 DDHD2O94830 711 aa27.25■■□□□ 1.95
TNFRSF4-201ENST00000379236 PRPF4BQ13523 1007 aaKnown RBP27.25■■□□□ 1.95
TNFRSF4-201ENST00000379236 ZRSR1Q15695 479 aaKnown RBP27.25■■□□□ 1.95
TNFRSF4-201ENST00000379236 PARP2Q9UGN5 583 aa27.25■■□□□ 1.95
TNFRSF4-201ENST00000379236 USP15Q9Y4E8 981 aaPredicted RBP27.25■■□□□ 1.95
TNFRSF4-201ENST00000379236 A0A1B0GUA9 196 aa27.24■■□□□ 1.95
TNFRSF4-201ENST00000379236 PP2D1A8MPX8 630 aa27.24■■□□□ 1.95
TNFRSF4-201ENST00000379236 N4BP3O15049 544 aa27.24■■□□□ 1.95
TNFRSF4-201ENST00000379236 PRKCBP05771 671 aa27.24■■□□□ 1.95
TNFRSF4-201ENST00000379236 ALADP13716 330 aa27.24■■□□□ 1.95
TNFRSF4-201ENST00000379236 OR1G1P47890 313 aa27.24■■□□□ 1.95
TNFRSF4-201ENST00000379236 AFF1P51825 1210 aaKnown RBP27.24■■□□□ 1.95
TNFRSF4-201ENST00000379236 ATP2C1P98194 919 aaPredicted RBP27.24■■□□□ 1.95
TNFRSF4-201ENST00000379236 ANKRD54Q6NXT1 300 aa27.24■■□□□ 1.95
TNFRSF4-201ENST00000379236 VN1R2Q8NFZ6 395 aa27.24■■□□□ 1.95
TNFRSF4-201ENST00000379236 BSNDQ8WZ55 320 aa27.24■■□□□ 1.95
TNFRSF4-201ENST00000379236 RPS6KC1Q96S38 1066 aa27.24■■□□□ 1.95
TNFRSF4-201ENST00000379236 ADPGKQ9BRR6 497 aa27.24■■□□□ 1.95
TNFRSF4-201ENST00000379236 RNF39Q9H2S5 420 aa27.24■■□□□ 1.95
TNFRSF4-201ENST00000379236 NRP1O14786 923 aa27.23■■□□□ 1.95
TNFRSF4-201ENST00000379236 CTSAP10619 480 aa27.23■■□□□ 1.95
TNFRSF4-201ENST00000379236 SCNN1GP51170 649 aa27.23■■□□□ 1.95
TNFRSF4-201ENST00000379236 FAM187BQ17R55 369 aa27.23■■□□□ 1.95
TNFRSF4-201ENST00000379236 TMEM184AQ6ZMB5 413 aa27.23■■□□□ 1.95
TNFRSF4-201ENST00000379236 BCL7CQ8WUZ0 217 aaPredicted RBP27.23■■□□□ 1.95
TNFRSF4-201ENST00000379236 AUTS2Q8WXX7 1259 aa27.23■■□□□ 1.95
TNFRSF4-201ENST00000379236 KHSRPQ92945 711 aaKnown RBP eCLIP27.23■■□□□ 1.95
TNFRSF4-201ENST00000379236 CDK5RAP3Q96JB5 506 aa27.23■■□□□ 1.95
TNFRSF4-201ENST00000379236 FZD8Q9H461 694 aa27.23■■□□□ 1.95
TNFRSF4-201ENST00000379236 PRG3Q9Y2Y8 225 aaPredicted RBP27.23■■□□□ 1.95
TNFRSF4-201ENST00000379236 VWA3AA6NCI4 1184 aa27.22■■□□□ 1.95
TNFRSF4-201ENST00000379236 E9PMD0 336 aa27.22■■□□□ 1.95
TNFRSF4-201ENST00000379236 PI4K2BG5E9Z4 385 aa27.22■■□□□ 1.95
TNFRSF4-201ENST00000379236 AKAP5P24588 427 aa27.22■■□□□ 1.95
TNFRSF4-201ENST00000379236 CDC25AP30304 524 aa27.22■■□□□ 1.95
TNFRSF4-201ENST00000379236 TPRNQ4KMQ1 711 aa27.22■■□□□ 1.95
TNFRSF4-201ENST00000379236 ZFP42Q96MM3 310 aa27.22■■□□□ 1.95
TNFRSF4-201ENST00000379236 C19orf67A6NJJ6 358 aa27.21■■□□□ 1.95
TNFRSF4-201ENST00000379236 B4GALT3O60512 393 aa27.21■■□□□ 1.95
TNFRSF4-201ENST00000379236 CLASP2O75122 1294 aaKnown RBP27.21■■□□□ 1.95
TNFRSF4-201ENST00000379236 SSBP05455 408 aaKnown RBP eCLIP27.21■■□□□ 1.95
TNFRSF4-201ENST00000379236 HOXB8P17481 243 aaPredicted RBP27.21■■□□□ 1.95
TNFRSF4-201ENST00000379236 EFNA5P52803 228 aa27.21■■□□□ 1.95
TNFRSF4-201ENST00000379236 IL17AQ16552 155 aa27.21■■□□□ 1.95
TNFRSF4-201ENST00000379236 TMEM31Q5JXX7 168 aa27.21■■□□□ 1.95
TNFRSF4-201ENST00000379236 APOL5Q9BWW9 433 aa27.21■■□□□ 1.95
TNFRSF4-201ENST00000379236 NT5C3AQ9H0P0 336 aa27.21■■□□□ 1.95
TNFRSF4-201ENST00000379236 POLD4Q9HCU8 107 aa27.21■■□□□ 1.95
TNFRSF4-201ENST00000379236 HCFC2Q9Y5Z7 792 aa27.21■■□□□ 1.95
TNFRSF4-201ENST00000379236 SPDYE4A6NLX3 237 aa27.2■■□□□ 1.94
TNFRSF4-201ENST00000379236 ACKR2O00590 384 aa27.2■■□□□ 1.94
TNFRSF4-201ENST00000379236 INPPL1O15357 1258 aa27.2■■□□□ 1.94
TNFRSF4-201ENST00000379236 KCNC3Q14003 757 aa27.2■■□□□ 1.94
TNFRSF4-201ENST00000379236 APBB1IPQ7Z5R6 666 aaPredicted RBP27.2■■□□□ 1.94
TNFRSF4-201ENST00000379236 COLGALT2Q8IYK4 626 aa27.2■■□□□ 1.94
TNFRSF4-201ENST00000379236 KIFC3Q9BVG8 833 aa27.2■■□□□ 1.94
TNFRSF4-201ENST00000379236 EMILIN2Q9BXX0 1053 aa27.2■■□□□ 1.94
TNFRSF4-201ENST00000379236 PDZD7Q9H5P4 517 aa27.2■■□□□ 1.94
TNFRSF4-201ENST00000379236 KLK14Q9P0G3 267 aa27.2■■□□□ 1.94
TNFRSF4-201ENST00000379236 IRAK3Q9Y616 596 aa27.2■■□□□ 1.94
TNFRSF4-201ENST00000379236 ZMYM2Q9UBW7 1377 aa27.2■■□□□ 1.94
TNFRSF4-201ENST00000379236 VPS37CA5D8V6 355 aaPredicted RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms