RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 ZNF713Q8N859 430 aaPredicted RBP12.57□□□□□ -0.4
NPHS1-202ENST00000378910 ATP2A3Q93084 1043 aa12.57□□□□□ -0.4
NPHS1-202ENST00000378910 COA7Q96BR5 231 aa12.57□□□□□ -0.4
NPHS1-202ENST00000378910 FERMT1Q9BQL6 677 aa12.57□□□□□ -0.4
NPHS1-202ENST00000378910 CCSER1Q9C0I3 900 aa12.57□□□□□ -0.4
NPHS1-202ENST00000378910 KANSL2Q9H9L4 492 aa12.57□□□□□ -0.4
NPHS1-202ENST00000378910 KRT82Q9NSB4 513 aa12.57□□□□□ -0.4
NPHS1-202ENST00000378910 SALL1Q9NSC2 1324 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 CD163L1Q9NR16 1453 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 A0A0U1RQJ8 604 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 POTEMA6NI47 508 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 NOTOA8MTQ0 251 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 PLEKP08567 350 aaPredicted RBP12.56□□□□□ -0.4
NPHS1-202ENST00000378910 PLA2G4BP0C869 781 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 PSMC2P35998 433 aaKnown RBP12.56□□□□□ -0.4
NPHS1-202ENST00000378910 HERVK_113P62684 666 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 MYL7Q01449 175 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 RNASELQ05823 741 aaKnown RBP12.56□□□□□ -0.4
NPHS1-202ENST00000378910 NSUN2Q08J23 767 aaKnown RBP eCLIP12.56□□□□□ -0.4
NPHS1-202ENST00000378910 TRIP13Q15645 432 aaPredicted RBP12.56□□□□□ -0.4
NPHS1-202ENST00000378910 TAF12Q16514 161 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 PALM2Q8IXS6 379 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 RFWD2Q8NHY2 731 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 BRIP1Q9BX63 1249 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 KLHL25Q9H0H3 589 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 ANGPTL2Q9UKU9 493 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 LRCH1Q9Y2L9 728 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 USP17L3A6NCW0 530 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 USP17L4A6NCW7 530 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 TTLL13PA6NNM8 815 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 KRT76Q01546 638 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 TMTC4Q5T4D3 741 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 USP17L1Q7RTZ2 530 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 DGKHQ86XP1 1220 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 DYNLL2Q96FJ2 89 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 GPC6Q9Y625 555 aaPredicted RBP12.56□□□□□ -0.4
NPHS1-202ENST00000378910 TCHHQ07283 1943 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 SPTLC1O15269 473 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 CSPG5O95196 566 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 CCDC159P0C7I6 412 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 CA4P22748 312 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 MAN1A1P33908 653 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 GALK1P51570 392 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 LBRQ14739 615 aaKnown RBP12.56□□□□□ -0.4
NPHS1-202ENST00000378910 CNGA3Q16281 694 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 TRPM8Q7Z2W7 1104 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 PPP2R3CQ969Q6 453 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 RIOK1Q9BRS2 568 aaKnown RBP12.56□□□□□ -0.4
NPHS1-202ENST00000378910 UBXN6Q9BZV1 441 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 DDX18Q9NVP1 670 aaKnown RBP12.56□□□□□ -0.4
NPHS1-202ENST00000378910 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 PCDHGA3Q9Y5H0 932 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 CEMIPQ8WUJ3 1361 aa12.56□□□□□ -0.4
NPHS1-202ENST00000378910 CDC42BPGQ6DT37 1551 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 SPDYE5A6NIY4 337 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 TTI1O43156 1089 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 LINGO3P0C6S8 592 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 CHN1P15882 459 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 ATF7P17544 494 aaPredicted RBP12.55□□□□□ -0.4
NPHS1-202ENST00000378910 POLR2EP19388 210 aaKnown RBP12.55□□□□□ -0.4
NPHS1-202ENST00000378910 MXI1P50539 228 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 SLC18A3Q16572 532 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 LGSNQ5TDP6 509 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 AGBL2Q5U5Z8 902 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 CCDC89Q8N998 374 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 GIMAP8Q8ND71 665 aaPredicted RBP12.55□□□□□ -0.4
NPHS1-202ENST00000378910 DUSP9Q99956 384 aaKnown RBP12.55□□□□□ -0.4
NPHS1-202ENST00000378910 PLAGL2Q9UPG8 496 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 PHF24Q9UPV7 400 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 DEPDC5O75140 1603 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 CBFA2T3O75081 653 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 UFL1O94874 794 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 HOXD11P31277 338 aaPredicted RBP12.55□□□□□ -0.4
NPHS1-202ENST00000378910 TMEM62Q0P6H9 643 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 SRBD1Q8N5C6 995 aaKnown RBP12.55□□□□□ -0.4
NPHS1-202ENST00000378910 HDAC7Q8WUI4 952 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 OSCP1Q8WVF1 389 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 ZC3H12CQ9C0D7 883 aaKnown RBP12.55□□□□□ -0.4
NPHS1-202ENST00000378910 CPVLQ9H3G5 476 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 GPBP1L1Q9HC44 474 aaPredicted RBP12.55□□□□□ -0.4
NPHS1-202ENST00000378910 XDHP47989 1333 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 HTR3EA5X5Y0 456 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 H0YC42 278 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 DDX39AO00148 427 aaKnown RBP12.55□□□□□ -0.4
NPHS1-202ENST00000378910 GSTA1P08263 222 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 GHRP10912 638 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 BRAFP15056 766 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 VHLP40337 213 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 TPD52P55327 224 aaPredicted RBP12.55□□□□□ -0.4
NPHS1-202ENST00000378910 PPP4R3CPQ6ZMV5 832 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 SRRM1Q8IYB3 904 aaKnown RBP12.55□□□□□ -0.4
NPHS1-202ENST00000378910 DEPTORQ8TB45 409 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 CEP44Q9C0F1 390 aa12.55□□□□□ -0.4
NPHS1-202ENST00000378910 EXOC1LA0A1B0GW35 172 aa12.54□□□□□ -0.4
NPHS1-202ENST00000378910 PRPF6O94906 941 aaKnown RBP12.54□□□□□ -0.4
NPHS1-202ENST00000378910 FNTAP49354 379 aa12.54□□□□□ -0.4
NPHS1-202ENST00000378910 SARSP49591 514 aaKnown RBP12.54□□□□□ -0.4
NPHS1-202ENST00000378910 PDIA6Q15084 440 aa12.54□□□□□ -0.4
NPHS1-202ENST00000378910 NEK5Q6P3R8 708 aa12.54□□□□□ -0.4
NPHS1-202ENST00000378910 AGAP3Q96P47 875 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms