RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 RSPH1Q8WYR4 309 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 CALML4Q96GE6 196 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 INTS4Q96HW7 963 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 PRIMPOLQ96LW4 560 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 MMTAG2Q9BU76 263 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 RUSC1Q9BVN2 902 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 NT5C3AQ9H0P0 336 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 NXF3Q9H4D5 531 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 NRDE2Q9H7Z3 1164 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 UBN1Q9NPG3 1134 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 USP20Q9Y2K6 914 aa12.78□□□□□ -0.36
SMARCE1-203ENST00000377808 MYO7AQ13402 2215 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 N4BP3O15049 544 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 IL9P15248 144 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 AKAP5P24588 427 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 AFF1P51825 1210 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 PEX3P56589 373 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 DHX8Q14562 1220 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 BMS1Q14692 1282 aaKnown RBP12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 RINT1Q6NUQ1 792 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 FAM173BQ6P4H8 233 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 ZNF280BQ86YH2 543 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 DRC1Q96MC2 740 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 PNMA5Q96PV4 448 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 RPS6KC1Q96S38 1066 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 GAD1Q99259 594 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 ADPGKQ9BRR6 497 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 KLK14Q9P0G3 267 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 KANSL3Q9P2N6 904 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 DNAJB4Q9UDY4 337 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 LZTS1Q9Y250 596 aa12.77□□□□□ -0.37
SMARCE1-203ENST00000377808 A0A1B0GUA9 196 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 ARL5CA6NH57 179 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 STX6O43752 255 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 GALTP07902 379 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 PLA2G4BP0C869 781 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 OR1G1P47890 313 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 SLC11A1P49279 550 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 SCNN1GP51170 649 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 GRIN1Q05586 938 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 DLX2Q07687 328 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 RESTQ13127 1097 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 SMC1AQ14683 1233 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 PDE12Q6L8Q7 609 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 LLGL2Q6P1M3 1020 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 TMEM173Q86WV6 379 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 SPRYD3Q8NCJ5 442 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 AK8Q96MA6 479 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 ZFP42Q96MM3 310 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 FZD8Q9H461 694 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 PDZD7Q9H5P4 517 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 NGRNQ9NPE2 291 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 KMT5AQ9NQR1 393 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 BARX2Q9UMQ3 279 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 FAM50BQ9Y247 325 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 FAN1Q9Y2M0 1017 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 PRG3Q9Y2Y8 225 aaPredicted RBP12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 CLIC4Q9Y696 253 aa12.76□□□□□ -0.37
SMARCE1-203ENST00000377808 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 CARNS1A5YM72 827 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 TTLL13PA6NNM8 815 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 SFI1A8K8P3 1242 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 HIDE1A8MVS5 230 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 K7ERI5 159 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 ACKR2O00590 384 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 FSCN2O14926 492 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 TBX10O75333 385 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 DDHD2O94830 711 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 KRT18P05783 430 aaKnown RBP12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 SRGAP2BP0DMP2 458 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 MARCKSP29966 332 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 SSTR3P32745 418 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 LONP1P36776 959 aaKnown RBP12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 NPTX2P47972 431 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 EFNA5P52803 228 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 KARSQ15046 597 aaKnown RBP12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 FAM187BQ17R55 369 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 PUS10Q3MIT2 529 aaKnown RBP12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 TMEM119Q4V9L6 283 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 SPECC1Q5M775 1068 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 HYIQ5T013 277 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 FOXD4L5Q5VV16 416 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 C1orf186Q6ZWK4 172 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 VPS52Q8N1B4 723 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 EFHBQ8N7U6 833 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 FOXD4L4Q8WXT5 416 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 AUTS2Q8WXX7 1259 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 SNX21Q969T3 373 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 IGSF21Q96ID5 467 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 CCDC113Q9H0I3 377 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 SNTG2Q9NY99 539 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 CD207Q9UJ71 328 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 MTMR6Q9Y217 621 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 GIT1Q9Y2X7 761 aa12.75□□□□□ -0.37
SMARCE1-203ENST00000377808 PHLPP2Q6ZVD8 1323 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 NPHP3-ACAD11A0A0J9YXS1 232 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 GRXCR2A6NFK2 248 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 SLC16A4O15374 487 aa12.74□□□□□ -0.37
SMARCE1-203ENST00000377808 B4GALT3O60512 393 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms