RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 A0A0A6YYK5 440 aaPredicted RBP16.38■□□□□ 0.21
MSH5-203ENST00000375750 FOXN3O00409 490 aaPredicted RBP16.38■□□□□ 0.21
MSH5-203ENST00000375750 RPL21P46778 160 aaKnown RBP16.38■□□□□ 0.21
MSH5-203ENST00000375750 FMO5P49326 533 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 ELMO3Q96BJ8 720 aa16.38■□□□□ 0.21
MSH5-203ENST00000375750 ACTR5Q9H9F9 607 aaPredicted RBP16.38■□□□□ 0.21
MSH5-203ENST00000375750 RPTORQ8N122 1335 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 SMCHD1A6NHR9 2005 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 SRRM3A6NNA2 597 aaPredicted RBP16.37■□□□□ 0.21
MSH5-203ENST00000375750 TISP43B9A030 160 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 KIAA0391O15091 583 aaKnown RBP16.37■□□□□ 0.21
MSH5-203ENST00000375750 KCNJ1P48048 391 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 PLCB4Q15147 1175 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 ANGEL2Q5VTE6 544 aaKnown RBP16.37■□□□□ 0.21
MSH5-203ENST00000375750 RINT1Q6NUQ1 792 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 SLFN12Q8IYM2 578 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 TRPM4Q8TD43 1214 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 ZNF317Q96PQ6 595 aaPredicted RBP16.37■□□□□ 0.21
MSH5-203ENST00000375750 MLXIPLQ9NP71 852 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 RABGAP1Q9Y3P9 1069 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 CYP3A7-CYP3A51PA0A087WV96 503 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 CCDC172P0C7W6 258 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 TNFAIP3P21580 790 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 CYP3A7P24462 503 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 LRRC14Q15048 493 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 PREPLQ4J6C6 727 aaPredicted RBP16.37■□□□□ 0.21
MSH5-203ENST00000375750 PHLDB3Q6NSJ2 640 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 MAEAQ7L5Y9 396 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 MGARPQ8TDB4 240 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 ATXN2LQ8WWM7 1075 aaKnown RBP16.37■□□□□ 0.21
MSH5-203ENST00000375750 SGSM3Q96HU1 749 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 FHDC1Q9C0D6 1143 aaPredicted RBP16.37■□□□□ 0.21
MSH5-203ENST00000375750 GRHL1Q9NZI5 618 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 MCM8Q9UJA3 840 aa16.37■□□□□ 0.21
MSH5-203ENST00000375750 CREB1P16220 341 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 RPL13P26373 211 aaKnown RBP16.36■□□□□ 0.21
MSH5-203ENST00000375750 HOXA7P31268 230 aaPredicted RBP16.36■□□□□ 0.21
MSH5-203ENST00000375750 MMP14P50281 582 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 PPP1R7Q15435 360 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 HIBCHQ6NVY1 386 aaPredicted RBP16.36■□□□□ 0.21
MSH5-203ENST00000375750 OTUD6AQ7L8S5 288 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 CCDC25Q86WR0 208 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 MBOAT7Q96N66 472 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 INTS2Q9H0H0 1204 aaKnown RBP16.36■□□□□ 0.21
MSH5-203ENST00000375750 GLT8D2Q9H1C3 349 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 METTL14Q9HCE5 456 aaKnown RBP16.36■□□□□ 0.21
MSH5-203ENST00000375750 ALG6Q9Y672 507 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 HGSO14964 777 aaPredicted RBP16.36■□□□□ 0.21
MSH5-203ENST00000375750 TMEM253P0C7T8 217 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 DLG4P78352 724 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 DRP2Q13474 957 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 DENND2CQ68D51 928 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 PRELID2Q8N945 189 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 CRYGNQ8WXF5 182 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 HOOK2Q96ED9 719 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 SYT11Q9BT88 431 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 STK33Q9BYT3 514 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 SPON1Q9HCB6 807 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.36■□□□□ 0.21
MSH5-203ENST00000375750 VAV3Q9UKW4 847 aa16.36■□□□□ 0.21
MSH5-203ENST00000375750 CCT8L1PA6NM43 557 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 FAM13AO94988 1023 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 VIMP08670 466 aaKnown RBP16.35■□□□□ 0.21
MSH5-203ENST00000375750 RPSAP08865 295 aaKnown RBP16.35■□□□□ 0.21
MSH5-203ENST00000375750 VCAM1P19320 739 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 PTGIRP43119 386 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 ACCSLQ4AC99 568 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 CCDC197Q8NCU1 140 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 ZSWIM2Q8NEG5 633 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 ERMNQ8TAM6 284 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 NEK9Q8TD19 979 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 CHURC1Q8WUH1 139 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 TCP11Q8WWU5 503 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 N4BP2L2Q92802 583 aaPredicted RBP16.35■□□□□ 0.21
MSH5-203ENST00000375750 KAT5Q92993 513 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 DYDC2Q96IM9 177 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 RAB17Q9H0T7 212 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 PABPC3Q9H361 631 aaKnown RBP16.35■□□□□ 0.21
MSH5-203ENST00000375750 DNAJC17Q9NVM6 304 aaKnown RBP16.35■□□□□ 0.21
MSH5-203ENST00000375750 BAIAP2L1Q9UHR4 511 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 NCANO14594 1321 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 RGS16O15492 202 aaPredicted RBP16.35■□□□□ 0.21
MSH5-203ENST00000375750 PPP1R12BO60237 982 aaPredicted RBP16.35■□□□□ 0.21
MSH5-203ENST00000375750 SCP2P22307 547 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 PSMC2P35998 433 aaKnown RBP16.35■□□□□ 0.21
MSH5-203ENST00000375750 NPEPPSP55786 919 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 ELF3P78545 371 aaPredicted RBP16.35■□□□□ 0.21
MSH5-203ENST00000375750 MESDQ14696 234 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 GIMAP7Q8NHV1 300 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 PCIF1Q9H4Z3 704 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 ABCF3Q9NUQ8 709 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 CTTNBP2NLQ9P2B4 639 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 ODF2LQ9ULJ1 636 aa16.35■□□□□ 0.21
MSH5-203ENST00000375750 LMNB1P20700 586 aa16.34■□□□□ 0.21
MSH5-203ENST00000375750 ZNF76P36508 570 aa16.34■□□□□ 0.21
MSH5-203ENST00000375750 LACTB2Q53H82 288 aaPredicted RBP16.34■□□□□ 0.21
MSH5-203ENST00000375750 TBC1D1Q86TI0 1168 aaPredicted RBP16.34■□□□□ 0.21
MSH5-203ENST00000375750 A1CFQ9NQ94 594 aaKnown RBP16.34■□□□□ 0.21
MSH5-203ENST00000375750 WRAP73Q9P2S5 460 aaPredicted RBP16.34■□□□□ 0.21
MSH5-203ENST00000375750 INTUQ9ULD6 942 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms