RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 DHX34Q14147 1143 aaKnown RBP11.95□□□□□ -0.5
CCDC40-203ENST00000374877 ABCB5Q2M3G0 1257 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 C6orf118Q5T5N4 469 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 RBM26Q5T8P6 1007 aaKnown RBP11.95□□□□□ -0.5
CCDC40-203ENST00000374877 FAM186BQ8IYM0 893 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 ERMNQ8TAM6 284 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 NSMCE1Q8WV22 266 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 GINM1Q9NU53 330 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 RPTORQ8N122 1335 aa11.95□□□□□ -0.5
CCDC40-203ENST00000374877 GRIN3BO60391 1043 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 LRRN2O75325 713 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 NEBLO76041 1014 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 AGTP01019 485 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 RPL21P46778 160 aaKnown RBP11.94□□□□□ -0.5
CCDC40-203ENST00000374877 CRYMQ14894 314 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 TBC1D10BQ4KMP7 808 aaPredicted RBP11.94□□□□□ -0.5
CCDC40-203ENST00000374877 C9orf131Q5VYM1 1079 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 OTUD6AQ7L8S5 288 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 SAMD7Q7Z3H4 446 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 PALB2Q86YC2 1186 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 SLC30A5Q8TAD4 765 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 NAP1L4Q99733 375 aaKnown RBP11.94□□□□□ -0.5
CCDC40-203ENST00000374877 KCNMB3Q9NPA1 279 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 AGAP1Q9UPQ3 857 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 DIS3Q9Y2L1 958 aaKnown RBP11.94□□□□□ -0.5
CCDC40-203ENST00000374877 PPP2R3BQ9Y5P8 575 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 NCANO14594 1321 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 TULP1O00294 542 aaPredicted RBP11.94□□□□□ -0.5
CCDC40-203ENST00000374877 RASGRF2O14827 1237 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 UBOX5O94941 541 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 EGFRP00533 1210 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 CHRM1P11229 460 aaPredicted RBP11.94□□□□□ -0.5
CCDC40-203ENST00000374877 RASA3Q14644 834 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 TLDC1Q6P9B6 456 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 EPM2AIP1Q7L775 607 aaPredicted RBP11.94□□□□□ -0.5
CCDC40-203ENST00000374877 SLFN12Q8IYM2 578 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 SYT2Q8N9I0 419 aaPredicted RBP11.94□□□□□ -0.5
CCDC40-203ENST00000374877 HOOK2Q96ED9 719 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 TMEM39BQ9GZU3 492 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 CTTNBP2NLQ9P2B4 639 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 PTPN22Q9Y2R2 807 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 HGSO14964 777 aaPredicted RBP11.94□□□□□ -0.5
CCDC40-203ENST00000374877 SLC16A3O15427 465 aaKnown RBP11.94□□□□□ -0.5
CCDC40-203ENST00000374877 KCNJ2P63252 427 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 TEPSINQ96N21 525 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 CHORDC1Q9UHD1 332 aaPredicted RBP11.94□□□□□ -0.5
CCDC40-203ENST00000374877 HACL1Q9UJ83 578 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 PCDHA1Q9Y5I3 950 aa11.94□□□□□ -0.5
CCDC40-203ENST00000374877 FAM196BA6NMK8 535 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 MARCKSL1P49006 195 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 MKRN4PQ13434 485 aaPredicted RBP11.93□□□□□ -0.5
CCDC40-203ENST00000374877 KRT35Q92764 455 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 RUSC1Q9BVN2 902 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 STK33Q9BYT3 514 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 MLXIPLQ9NP71 852 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 GRHL1Q9NZI5 618 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 COG5Q9UP83 839 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 ALG6Q9Y672 507 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 ATAD5Q96QE3 1844 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 ATP8B3O60423 1300 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 CFAP73A6NFT4 308 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 PHF2O75151 1096 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 TRIM49P0CI25 452 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 TRIM49CP0CI26 452 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 KSR1Q8IVT5 923 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 STMN4Q9H169 189 aaPredicted RBP11.93□□□□□ -0.5
CCDC40-203ENST00000374877 ANP32DO95626 131 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 SPATA31C1P0DKV0 1188 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 VCAM1P19320 739 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 NMT1P30419 496 aaKnown RBP11.93□□□□□ -0.5
CCDC40-203ENST00000374877 PSMC2P35998 433 aaKnown RBP11.93□□□□□ -0.5
CCDC40-203ENST00000374877 PDE6CP51160 858 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 MAP2K1Q02750 393 aaPredicted RBP11.93□□□□□ -0.5
CCDC40-203ENST00000374877 LLGL1Q15334 1064 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 CCDC137Q6PK04 289 aaKnown RBP11.93□□□□□ -0.5
CCDC40-203ENST00000374877 TAOK1Q7L7X3 1001 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 CCDC105Q8IYK2 499 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 KIF2BQ8N4N8 673 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 PRELID2Q8N945 189 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 AGAP11Q8TF27 550 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 ECT2Q9H8V3 914 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 SLC24A3Q9HC58 644 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 FGFR1OP2Q9NVK5 253 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 STK38LQ9Y2H1 464 aa11.93□□□□□ -0.5
CCDC40-203ENST00000374877 GTPBP10A4D1E9 387 aaKnown RBP11.92□□□□□ -0.5
CCDC40-203ENST00000374877 SKAP2O75563 359 aaPredicted RBP11.92□□□□□ -0.5
CCDC40-203ENST00000374877 RPA1P27694 616 aa11.92□□□□□ -0.5
CCDC40-203ENST00000374877 FMO5P49326 533 aa11.92□□□□□ -0.5
CCDC40-203ENST00000374877 CYP2J2P51589 502 aa11.92□□□□□ -0.5
CCDC40-203ENST00000374877 ARHGAP4P98171 946 aa11.92□□□□□ -0.5
CCDC40-203ENST00000374877 ICA1Q05084 483 aa11.92□□□□□ -0.5
CCDC40-203ENST00000374877 CNGA2Q16280 664 aa11.92□□□□□ -0.5
CCDC40-203ENST00000374877 QRICH1Q2TAL8 776 aa11.92□□□□□ -0.5
CCDC40-203ENST00000374877 ZC2HC1CQ53FD0 456 aaPredicted RBP11.92□□□□□ -0.5
CCDC40-203ENST00000374877 UBL4BQ8N7F7 174 aa11.92□□□□□ -0.5
CCDC40-203ENST00000374877 OLIG1Q8TAK6 271 aa11.92□□□□□ -0.5
CCDC40-203ENST00000374877 DCAF4Q8WV16 495 aa11.92□□□□□ -0.5
CCDC40-203ENST00000374877 L3MBTL3Q96JM7 780 aaPredicted RBP11.92□□□□□ -0.5
CCDC40-203ENST00000374877 ADARB2Q9NS39 739 aaKnown RBP11.92□□□□□ -0.5
CCDC40-203ENST00000374877 SYNGAP1Q96PV0 1343 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms