RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 RHOT2Q8IXI1 618 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.43□□□□□ -0.74
COL4A6-202ENST00000372216 FAF2Q96CS3 445 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 ABHD8Q96I13 439 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 ACAP3Q96P50 834 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 ANAPC7Q9UJX3 599 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 AGO2Q9UKV8 859 aaKnown RBP10.43□□□□□ -0.74
COL4A6-202ENST00000372216 ZNF609O15014 1411 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 PXDNLA1KZ92 1463 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 CALB1P05937 261 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 GNA15P30679 374 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 NNMTP40261 264 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 MFSD4BQ5TF39 518 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 LRRC31Q6UY01 552 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 DEFB129Q9H1M3 183 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 ATP8A1Q9Y2Q0 1164 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 A8MXQ7 604 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 RSPH10B2B2RC85 870 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 RSPH10BP0C881 870 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 ATP1A3P13637 1013 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 NFKBIAP25963 317 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 CCDC38Q502W7 563 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 C11orf96Q7Z7L8 435 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 SLC16A10Q8TF71 515 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 ASIC4Q96FT7 647 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 GINM1Q9NU53 330 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 C2CD2LO14523 706 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 TJP3O95049 919 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 ARHGAP25P42331 645 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 DR1Q01658 176 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 FBXO33Q7Z6M2 555 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 GAS2L3Q86XJ1 694 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 HIPK4Q8NE63 616 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 GPRC5AQ8NFJ5 357 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 BHMTQ93088 406 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 ADAMTS1Q9UHI8 967 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 ZSCAN9O15535 394 aaPredicted RBP10.43□□□□□ -0.74
COL4A6-202ENST00000372216 MFAP3LO75121 409 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 OCRLQ01968 901 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 KIAA1755Q5JYT7 1200 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 STOX1Q6ZVD7 989 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 ADCK2Q7Z695 626 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 ZNF512BQ96KM6 892 aaPredicted RBP10.43□□□□□ -0.74
COL4A6-202ENST00000372216 SPON2Q9BUD6 331 aa10.43□□□□□ -0.74
COL4A6-202ENST00000372216 E5RI56 91 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 F8W8V4 182 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 LCP1P13796 627 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 HSPA6P17066 643 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 CCDC138Q96M89 665 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 VCPKMTQ9H867 229 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 BCL2L12Q9HB09 334 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 CASS4Q9NQ75 786 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 RGL1Q9NZL6 768 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 TEKT2Q9UIF3 430 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 PRR12Q9ULL5 1215 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 PFASO15067 1338 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 UBA6A0AVT1 1052 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-202ENST00000372216 CTNND1O60716 968 aaKnown RBP10.42□□□□□ -0.74
COL4A6-202ENST00000372216 EYA4O95677 639 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 TFRCP02786 760 aaKnown RBP10.42□□□□□ -0.74
COL4A6-202ENST00000372216 BTN2A2Q8WVV5 523 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 TMEM143Q96AN5 459 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 SIK2Q9H0K1 926 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 SMARCAD1Q9H4L7 1026 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 SYTL2Q9HCH5 934 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 STRIP2Q9ULQ0 834 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 HEY1Q9Y5J3 304 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 GRIK1P39086 918 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 IL9RQ01113 521 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 TAGAPQ8N103 731 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 MAML1Q92585 1016 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 PPARGP37231 505 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-202ENST00000372216 LIG3P49916 1009 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 KPNA2P52292 529 aaKnown RBP10.42□□□□□ -0.74
COL4A6-202ENST00000372216 EFNA5P52803 228 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 MRPS25P82663 173 aaKnown RBP10.42□□□□□ -0.74
COL4A6-202ENST00000372216 GLE1Q53GS7 698 aaKnown RBP10.42□□□□□ -0.74
COL4A6-202ENST00000372216 ZC3H12BQ5HYM0 836 aaKnown RBP10.42□□□□□ -0.74
COL4A6-202ENST00000372216 AGBL3Q8NEM8 1001 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 DPF3Q92784 378 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 ZNF560Q96MR9 790 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 POLR1AO95602 1720 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-202ENST00000372216 LRRC53A6NM62 1247 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 SUPT3HB4E1H0 165 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 BBS9Q3SYG4 887 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 EGFL8Q99944 293 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 C11orf70Q9BRQ4 267 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 CAPS2Q9BXY5 557 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 KLHL8Q9P2G9 620 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-202ENST00000372216 LGALS16A8MUM7 142 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 SLC25A27O95847 323 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 ATP2C1P98194 919 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-202ENST00000372216 AP1B1Q10567 949 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 CCDC85BQ15834 202 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-202ENST00000372216 SLC10A5Q5PT55 438 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 ATXN7L3BQ96GX2 97 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 CEP19Q96LK0 163 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 TRAIPQ9BWF2 469 aa10.42□□□□□ -0.74
COL4A6-202ENST00000372216 ALDH8A1Q9H2A2 487 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-202ENST00000372216 CLTAP09496 248 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms