RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 VPS41P49754 854 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 DNAJC3Q13217 504 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 MTFR1Q15390 333 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 PPP1R15BQ5SWA1 713 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 UBL4BQ8N7F7 174 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 C1orf54Q8WWF1 131 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 GPR88Q9GZN0 384 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 SLCO1B3Q9NPD5 702 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 CHKBQ9Y259 395 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 NAV1Q8NEY1 1877 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 PASKQ96RG2 1323 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 PITPNM2Q9BZ72 1349 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 A0A1B0GVG6 124 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 ANKRD62A6NC57 917 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 TULP1O00294 542 aaPredicted RBP10.36□□□□□ -0.75
LRRC40-201ENST00000370952 SPAG7O75391 227 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 LGR5O75473 907 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 TTLL1O95922 423 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 LDHBP07195 334 aaKnown RBP10.36□□□□□ -0.75
LRRC40-201ENST00000370952 DLATP10515 647 aaKnown RBP10.36□□□□□ -0.75
LRRC40-201ENST00000370952 CBWD6Q4V339 395 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 CBWD3Q5JTY5 395 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 CBWD5Q5RIA9 395 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 HYIQ5T013 277 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 NEDD1Q8NHV4 660 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 MAGEB18Q96M61 343 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 SERPINB12Q96P63 405 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 RUSC1Q9BVN2 902 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 TBC1D10AQ9BXI6 508 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.36□□□□□ -0.75
LRRC40-201ENST00000370952 ASIC3Q9UHC3 531 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 ROBO3Q96MS0 1386 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 ATP8B3O60423 1300 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 MYH14Q7Z406 1995 aaKnown RBP10.36□□□□□ -0.75
LRRC40-201ENST00000370952 USP17L15C9J2P7 530 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 USP17L13C9JLJ4 530 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 USP17L11C9JVI0 530 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 USP17L18D6R9N7 530 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 USP17L22D6RA61 530 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 USP17L17D6RBQ6 530 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 USP17L19D6RCP7 530 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 USP17L20D6RJB6 530 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 UBAP1LF5GYI3 381 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 PDXKO00764 312 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 TP73O15350 636 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 CHRNB2P17787 502 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 POLD1P28340 1107 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 SLC16A2P36021 539 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 MRPS35P82673 323 aaKnown RBP10.36□□□□□ -0.75
LRRC40-201ENST00000370952 CYP4A11Q02928 519 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 USP17L24Q0WX57 530 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 COG2Q14746 738 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 NBPF20Q3BBV1 942 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 RBM26Q5T8P6 1007 aaKnown RBP10.36□□□□□ -0.75
LRRC40-201ENST00000370952 TTBK2Q6IQ55 1244 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 USP17L6PQ6QN14 398 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 SMIM5Q71RC9 77 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 CATSPER3Q86XQ3 398 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 PHC3Q8NDX5 983 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 DNAJC9Q8WXX5 260 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 SYT11Q9BT88 431 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 STK33Q9BYT3 514 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 LRMDAQ9H2I8 198 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 METTL14Q9HCE5 456 aaKnown RBP10.36□□□□□ -0.75
LRRC40-201ENST00000370952 TYW1Q9NV66 732 aaKnown RBP10.36□□□□□ -0.75
LRRC40-201ENST00000370952 NKIRAS1Q9NYS0 192 aa10.36□□□□□ -0.75
LRRC40-201ENST00000370952 FTLP02792 175 aaPredicted RBP10.35□□□□□ -0.75
LRRC40-201ENST00000370952 SP100P23497 879 aaPredicted RBP10.35□□□□□ -0.75
LRRC40-201ENST00000370952 SKIV2L2P42285 1042 aaKnown RBP10.35□□□□□ -0.75
LRRC40-201ENST00000370952 POLE2P56282 527 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 KRT17Q04695 432 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 KLC1Q07866 573 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 SETDB1Q15047 1291 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 MUM1Q2TAK8 710 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 TRMT10CQ7L0Y3 403 aaKnown RBP10.35□□□□□ -0.75
LRRC40-201ENST00000370952 MIGA2Q7L4E1 593 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 EPM2AIP1Q7L775 607 aaPredicted RBP10.35□□□□□ -0.75
LRRC40-201ENST00000370952 SLC13A5Q86YT5 568 aaPredicted RBP10.35□□□□□ -0.75
LRRC40-201ENST00000370952 FAM186BQ8IYM0 893 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 ASAP3Q8TDY4 903 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 DENND2DQ9H6A0 471 aaPredicted RBP10.35□□□□□ -0.75
LRRC40-201ENST00000370952 IRAK4Q9NWZ3 460 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 ANKIB1Q9P2G1 1089 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 FOXN3O00409 490 aaPredicted RBP10.35□□□□□ -0.75
LRRC40-201ENST00000370952 THAP12O43422 761 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 ECEL1O95672 775 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 FMO5P49326 533 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 POLGP54098 1239 aaPredicted RBP10.35□□□□□ -0.75
LRRC40-201ENST00000370952 WDR4P57081 412 aaKnown RBP10.35□□□□□ -0.75
LRRC40-201ENST00000370952 ROR2Q01974 943 aaKnown RBP10.35□□□□□ -0.75
LRRC40-201ENST00000370952 ZNF568Q3ZCX4 644 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 MFN1Q8IWA4 741 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 ATG4AQ8WYN0 398 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 PPP1R12CQ9BZL4 782 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 DNAJC18Q9H819 358 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 NAALADL1Q9UQQ1 740 aa10.35□□□□□ -0.75
LRRC40-201ENST00000370952 CLDN3O15551 220 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 T-ENOLP0DO92 83 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 HSPA6P17066 643 aa10.34□□□□□ -0.75
LRRC40-201ENST00000370952 RPL13P26373 211 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms