RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 REEP2Q9BRK0 252 aa20.91■□□□□ 0.94
LMO4-202ENST00000370544 IQCA1LA6NCM1 817 aa20.91■□□□□ 0.94
LMO4-202ENST00000370544 HDLBPQ00341 1268 aaKnown RBP20.91■□□□□ 0.94
LMO4-202ENST00000370544 PDIA6Q15084 440 aa20.91■□□□□ 0.94
LMO4-202ENST00000370544 TKFCQ3LXA3 575 aa20.91■□□□□ 0.94
LMO4-202ENST00000370544 SLC10A5Q5PT55 438 aa20.91■□□□□ 0.94
LMO4-202ENST00000370544 BARGINQ6ZT62 677 aa20.91■□□□□ 0.94
LMO4-202ENST00000370544 A0A087WUV0 522 aaPredicted RBP20.91■□□□□ 0.94
LMO4-202ENST00000370544 ATP1A1P05023 1023 aaKnown RBP20.91■□□□□ 0.94
LMO4-202ENST00000370544 HSPA8P11142 646 aaKnown RBP20.91■□□□□ 0.94
LMO4-202ENST00000370544 YWHAHQ04917 246 aaPredicted RBP20.91■□□□□ 0.94
LMO4-202ENST00000370544 DMTNQ08495 405 aa20.91■□□□□ 0.94
LMO4-202ENST00000370544 HEATR6Q6AI08 1181 aaKnown RBP20.91■□□□□ 0.94
LMO4-202ENST00000370544 ZNF560Q96MR9 790 aa20.91■□□□□ 0.94
LMO4-202ENST00000370544 PRR12Q9ULL5 1215 aa20.91■□□□□ 0.94
LMO4-202ENST00000370544 CYP26A1O43174 497 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 DGAT1O75907 488 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 FMR1Q06787 632 aaKnown RBP eCLIP20.9■□□□□ 0.94
LMO4-202ENST00000370544 XKR3Q5GH77 459 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 EFHC2Q5JST6 749 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 KIAA1755Q5JYT7 1200 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 ESYT3A0FGR9 886 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 C19orf81C9J6K1 198 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 CTIFO43310 598 aaKnown RBP20.9■□□□□ 0.94
LMO4-202ENST00000370544 SLC26A4O43511 780 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 ROR1Q01973 937 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 TAP1Q03518 808 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 PDLIM2Q96JY6 352 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 ELAC2Q9BQ52 826 aaKnown RBP20.9■□□□□ 0.94
LMO4-202ENST00000370544 A0A1B0GTH6 734 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 FAM187AA6NFU0 413 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 RHOBTB3O94955 611 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 TRIM59Q8IWR1 403 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 SPDYE1Q8NFV5 336 aaPredicted RBP20.9■□□□□ 0.94
LMO4-202ENST00000370544 CFLARO15519 480 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 KRT14P02533 472 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 SSTR3P32745 418 aaPredicted RBP20.9■□□□□ 0.94
LMO4-202ENST00000370544 GPS1Q13098 491 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 NME3Q13232 169 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 PDCLQ13371 301 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 TMCO4Q5TGY1 634 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 EPM2AIP1Q7L775 607 aaPredicted RBP20.9■□□□□ 0.94
LMO4-202ENST00000370544 ELMOD1Q8N336 334 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 ZNF280CQ8ND82 737 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 RBM46Q8TBY0 533 aaKnown RBP20.9■□□□□ 0.94
LMO4-202ENST00000370544 SUCLA2Q9P2R7 463 aaPredicted RBP20.9■□□□□ 0.94
LMO4-202ENST00000370544 HPCAL4Q9UM19 191 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 MRFAP1Q9Y605 127 aa20.9■□□□□ 0.94
LMO4-202ENST00000370544 CCDC137Q6PK04 289 aaKnown RBP20.89■□□□□ 0.94
LMO4-202ENST00000370544 AFG1LQ8WV93 481 aa20.89■□□□□ 0.94
LMO4-202ENST00000370544 ACAP3Q96P50 834 aa20.89■□□□□ 0.94
LMO4-202ENST00000370544 GGPS1O95749 300 aa20.89■□□□□ 0.93
LMO4-202ENST00000370544 OR6J1Q8NGC5 347 aa20.89■□□□□ 0.93
LMO4-202ENST00000370544 SNF8Q96H20 258 aa20.89■□□□□ 0.93
LMO4-202ENST00000370544 FAM8A1Q9UBU6 413 aa20.89■□□□□ 0.93
LMO4-202ENST00000370544 CNTNAP4Q9C0A0 1308 aa20.89■□□□□ 0.93
LMO4-202ENST00000370544 HOXD10P28358 340 aa20.89■□□□□ 0.93
LMO4-202ENST00000370544 BCAR1P56945 870 aa20.89■□□□□ 0.93
LMO4-202ENST00000370544 RNF219Q5W0B1 726 aaPredicted RBP20.89■□□□□ 0.93
LMO4-202ENST00000370544 CDKL3Q8IVW4 592 aaPredicted RBP20.89■□□□□ 0.93
LMO4-202ENST00000370544 FBXO41Q8TF61 875 aa20.89■□□□□ 0.93
LMO4-202ENST00000370544 SENP2Q9HC62 589 aa20.89■□□□□ 0.93
LMO4-202ENST00000370544 ZBTB12Q9Y330 459 aaPredicted RBP20.89■□□□□ 0.93
LMO4-202ENST00000370544 CNTNAP5Q8WYK1 1306 aa20.89■□□□□ 0.93
LMO4-202ENST00000370544 A0A0G2JND7 137 aa20.89■□□□□ 0.93
LMO4-202ENST00000370544 RTN2O75298 545 aa20.89■□□□□ 0.93
LMO4-202ENST00000370544 SH3BGRP55822 239 aaPredicted RBP20.89■□□□□ 0.93
LMO4-202ENST00000370544 TRIM55Q9BYV6 548 aa20.89■□□□□ 0.93
LMO4-202ENST00000370544 DCTN3O75935 186 aa20.88■□□□□ 0.93
LMO4-202ENST00000370544 GYS2P54840 703 aa20.88■□□□□ 0.93
LMO4-202ENST00000370544 OCRLQ01968 901 aa20.88■□□□□ 0.93
LMO4-202ENST00000370544 MTF1Q14872 753 aa20.88■□□□□ 0.93
LMO4-202ENST00000370544 SCG3Q8WXD2 468 aaKnown RBP20.88■□□□□ 0.93
LMO4-202ENST00000370544 FGD4Q96M96 766 aa20.88■□□□□ 0.93
LMO4-202ENST00000370544 SERPINI1Q99574 410 aa20.88■□□□□ 0.93
LMO4-202ENST00000370544 TAF1DQ9H5J8 278 aaPredicted RBP20.88■□□□□ 0.93
LMO4-202ENST00000370544 VCPKMTQ9H867 229 aa20.88■□□□□ 0.93
LMO4-202ENST00000370544 ORC6Q9Y5N6 252 aa20.88■□□□□ 0.93
LMO4-202ENST00000370544 FAM151AQ8WW52 585 aa20.88■□□□□ 0.93
LMO4-202ENST00000370544 AP1B1Q10567 949 aa20.88■□□□□ 0.93
LMO4-202ENST00000370544 DHX35Q9H5Z1 703 aaKnown RBP20.88■□□□□ 0.93
LMO4-202ENST00000370544 WDR75Q8IWA0 830 aaKnown RBP20.88■□□□□ 0.93
LMO4-202ENST00000370544 KCND2Q9NZV8 630 aa20.88■□□□□ 0.93
LMO4-202ENST00000370544 RECQLP46063 649 aaPredicted RBP20.87■□□□□ 0.93
LMO4-202ENST00000370544 E2F5Q15329 346 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 CDC26Q8NHZ8 85 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 TMEM143Q96AN5 459 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 TRAIPQ9BWF2 469 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 APEX2Q9UBZ4 518 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 ZC3H13Q5T200 1668 aaKnown RBP20.87■□□□□ 0.93
LMO4-202ENST00000370544 CEMIPQ8WUJ3 1361 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 F5H423 210 aaPredicted RBP20.87■□□□□ 0.93
LMO4-202ENST00000370544 SRGNP10124 158 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 MAGOHP61326 146 aaKnown RBP20.87■□□□□ 0.93
LMO4-202ENST00000370544 ALKBH8Q96BT7 664 aaKnown RBP20.87■□□□□ 0.93
LMO4-202ENST00000370544 PIK3C2BO00750 1634 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 PSMD14O00487 310 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 FRA10AC1Q70Z53 315 aa20.87■□□□□ 0.93
LMO4-202ENST00000370544 THOC1Q96FV9 657 aaKnown RBP20.87■□□□□ 0.93
LMO4-202ENST00000370544 SH2D3AQ9BRG2 576 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms