RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 PHTF1Q9UMS5 762 aa17.34■□□□□ 0.37
CHD1L-203ENST00000369259 COG5Q9UP83 839 aa17.34■□□□□ 0.37
CHD1L-203ENST00000369259 NPHP3-ACAD11A0A0J9YXS1 232 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 CBX6O95503 412 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 TTC4O95801 387 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 GSTT1P30711 240 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 GIT2Q14161 759 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 CTTNQ14247 550 aaKnown RBP17.33■□□□□ 0.37
CHD1L-203ENST00000369259 CYP1B1Q16678 543 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 SLC4A8Q2Y0W8 1093 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 TCERG1LQ5VWI1 586 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 C4orf50Q6ZRC1 276 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 ZC3H18Q86VM9 953 aaKnown RBP17.33■□□□□ 0.37
CHD1L-203ENST00000369259 SRRM1Q8IYB3 904 aaKnown RBP17.33■□□□□ 0.37
CHD1L-203ENST00000369259 ZNF34Q8IZ26 560 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 KRT35Q92764 455 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 GATA6Q92908 595 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 THAP2Q9H0W7 228 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 TMOD3Q9NYL9 352 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 LGALS13Q9UHV8 139 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 TRAF3IP3Q9Y228 551 aa17.33■□□□□ 0.37
CHD1L-203ENST00000369259 SOX5P35711 763 aa17.33■□□□□ 0.36
CHD1L-203ENST00000369259 NT5C2P49902 561 aa17.33■□□□□ 0.36
CHD1L-203ENST00000369259 SPDYAQ5MJ70 313 aa17.33■□□□□ 0.36
CHD1L-203ENST00000369259 SEL1L2Q5TEA6 688 aa17.33■□□□□ 0.36
CHD1L-203ENST00000369259 SEPT14Q6ZU15 432 aa17.33■□□□□ 0.36
CHD1L-203ENST00000369259 SH3RF3Q8TEJ3 882 aaPredicted RBP17.33■□□□□ 0.36
CHD1L-203ENST00000369259 ZWILCHQ9H900 591 aa17.33■□□□□ 0.36
CHD1L-203ENST00000369259 MCM9Q9NXL9 1143 aa17.33■□□□□ 0.36
CHD1L-203ENST00000369259 ACTL7BQ9Y614 415 aa17.33■□□□□ 0.36
CHD1L-203ENST00000369259 ADAMTSL3P82987 1691 aa17.33■□□□□ 0.36
CHD1L-203ENST00000369259 ANKRD62A6NC57 917 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 EDIL3O43854 480 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 SERPINB4P48594 390 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 USP4Q13107 963 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 MIGA2Q7L4E1 593 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 GPBP1Q86WP2 473 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 CCNJLQ8IV13 435 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 ARHGAP18Q8N392 663 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 NRG4Q8WWG1 115 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 AZIN2Q96A70 460 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 OPTNQ96CV9 577 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 NDNQ99608 321 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 TMEM47Q9BQJ4 181 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 ZSWIM1Q9BR11 485 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 WHRNQ9P202 907 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 MTUS1Q9ULD2 1270 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 ASAP1Q9ULH1 1129 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 G3BP2Q9UN86 482 aaKnown RBP17.32■□□□□ 0.36
CHD1L-203ENST00000369259 E9PMD0 336 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 IMPDH2P12268 514 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 MARCKSL1P49006 195 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 WDR4P57081 412 aaKnown RBP17.32■□□□□ 0.36
CHD1L-203ENST00000369259 ADCY1Q08828 1119 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 TNIP1Q15025 636 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 RCN1Q15293 331 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 HHATQ5VTY9 493 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 C11orf63Q6NUN7 778 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 EPM2AIP1Q7L775 607 aaPredicted RBP17.32■□□□□ 0.36
CHD1L-203ENST00000369259 SYT11Q9BT88 431 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 VCX3BQ9H321 246 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 VCX3AQ9NNX9 186 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 TBK1Q9UHD2 729 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 LNPEPQ9UIQ6 1025 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 NAALADL1Q9UQQ1 740 aa17.32■□□□□ 0.36
CHD1L-203ENST00000369259 ESYT2A0FGR8 921 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 ERVV-1B6SEH8 477 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 AKAP3O75969 853 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 ECEL1O95672 775 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 USP17L8P0C7I0 530 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 PLA2G4BP0C869 781 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 CHKAP35790 457 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 KCNJ1P48048 391 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 MECOMQ03112 1051 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 DNAJC3Q13217 504 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.31■□□□□ 0.36
CHD1L-203ENST00000369259 RHOT2Q8IXI1 618 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 ANKRD35Q8N283 1001 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 METTL14Q9HCE5 456 aaKnown RBP17.31■□□□□ 0.36
CHD1L-203ENST00000369259 STX8Q9UNK0 236 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 PHF24Q9UPV7 400 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 GTPBP10A4D1E9 387 aaKnown RBP17.31■□□□□ 0.36
CHD1L-203ENST00000369259 FAM47DPA6NHR8 397 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 TULP1O00294 542 aaPredicted RBP17.31■□□□□ 0.36
CHD1L-203ENST00000369259 TP73O15350 636 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 HNRNPCL1O60812 293 aaKnown RBP17.31■□□□□ 0.36
CHD1L-203ENST00000369259 COQ9O75208 318 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 TSPY3P0CV98 308 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 TSPY8P0CW00 308 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 HADHBP55084 474 aaKnown RBP17.31■□□□□ 0.36
CHD1L-203ENST00000369259 SLC34A1Q06495 639 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 KYNUQ16719 465 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 HYIQ5T013 277 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 RFWD3Q6PCD5 774 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 LRRC74BQ6ZQY2 392 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 SLC35C1Q96A29 364 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 ZHX3Q9H4I2 956 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 MKNK2Q9HBH9 465 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 TAS2R14Q9NYV8 317 aa17.31■□□□□ 0.36
CHD1L-203ENST00000369259 NHSL1Q5SYE7 1610 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms