RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 MIEF2Q96C03 454 aa8.79□□□□□ -1
CD46-208ENST00000367042 PWWP2AQ96N64 755 aa8.79□□□□□ -1
CD46-208ENST00000367042 CDC42EP4Q9H3Q1 356 aaKnown RBP8.79□□□□□ -1
CD46-208ENST00000367042 A1CFQ9NQ94 594 aaKnown RBP8.79□□□□□ -1
CD46-208ENST00000367042 AGPAT3Q9NRZ7 376 aa8.79□□□□□ -1
CD46-208ENST00000367042 ZDHHC18Q9NUE0 388 aa8.79□□□□□ -1
CD46-208ENST00000367042 KLHL14Q9P2G3 628 aa8.79□□□□□ -1
CD46-208ENST00000367042 PNMA3Q9UL41 463 aa8.79□□□□□ -1
CD46-208ENST00000367042 AGAP1Q9UPQ3 857 aa8.79□□□□□ -1
CD46-208ENST00000367042 USTQ9Y2C2 406 aa8.79□□□□□ -1
CD46-208ENST00000367042 USP15Q9Y4E8 981 aaPredicted RBP8.79□□□□□ -1
CD46-208ENST00000367042 NHSQ6T4R5 1651 aa8.79□□□□□ -1
CD46-208ENST00000367042 RPTORQ8N122 1335 aa8.79□□□□□ -1
CD46-208ENST00000367042 C5orf60A6NFR6 353 aa8.79□□□□□ -1
CD46-208ENST00000367042 DNAJC8O75937 253 aaPredicted RBP8.79□□□□□ -1
CD46-208ENST00000367042 GAP43P17677 238 aa8.79□□□□□ -1
CD46-208ENST00000367042 ALDH5A1P51649 535 aaPredicted RBP8.79□□□□□ -1
CD46-208ENST00000367042 BFSP1Q12934 665 aa8.79□□□□□ -1
CD46-208ENST00000367042 AP3B2Q13367 1082 aa8.79□□□□□ -1
CD46-208ENST00000367042 ZDHHC24Q6UX98 284 aa8.79□□□□□ -1
CD46-208ENST00000367042 ETNPPLQ8TBG4 499 aa8.79□□□□□ -1
CD46-208ENST00000367042 ATXN2LQ8WWM7 1075 aaKnown RBP8.79□□□□□ -1
CD46-208ENST00000367042 TEKT1Q969V4 418 aa8.79□□□□□ -1
CD46-208ENST00000367042 IFT74Q96LB3 600 aa8.79□□□□□ -1
CD46-208ENST00000367042 RUNDC3BQ96NL0 473 aa8.79□□□□□ -1
CD46-208ENST00000367042 ZNF317Q96PQ6 595 aaPredicted RBP8.79□□□□□ -1
CD46-208ENST00000367042 TGS1Q96RS0 853 aaKnown RBP8.79□□□□□ -1
CD46-208ENST00000367042 ZSWIM1Q9BR11 485 aa8.79□□□□□ -1
CD46-208ENST00000367042 TRIM6Q9C030 488 aaPredicted RBP8.79□□□□□ -1
CD46-208ENST00000367042 DIS3Q9Y2L1 958 aaKnown RBP8.79□□□□□ -1
CD46-208ENST00000367042 MYO3BQ8WXR4 1341 aa8.78□□□□□ -1
CD46-208ENST00000367042 MIF4GDA9UHW6 222 aaKnown RBP8.78□□□□□ -1
CD46-208ENST00000367042 UBAP1LF5GYI3 381 aa8.78□□□□□ -1
CD46-208ENST00000367042 PPIP5K2O43314 1243 aa8.78□□□□□ -1
CD46-208ENST00000367042 GH1P01241 217 aa8.78□□□□□ -1
CD46-208ENST00000367042 CALCAP01258 141 aa8.78□□□□□ -1
CD46-208ENST00000367042 PAEPP09466 180 aa8.78□□□□□ -1
CD46-208ENST00000367042 SNHG28P0DPA3 235 aa8.78□□□□□ -1
CD46-208ENST00000367042 COILP38432 576 aaPredicted RBP8.78□□□□□ -1
CD46-208ENST00000367042 AUHQ13825 339 aaKnown RBP8.78□□□□□ -1
CD46-208ENST00000367042 TMED2Q15363 201 aa8.78□□□□□ -1
CD46-208ENST00000367042 EPC2Q52LR7 807 aa8.78□□□□□ -1
CD46-208ENST00000367042 PRR5LQ6MZQ0 368 aa8.78□□□□□ -1
CD46-208ENST00000367042 ZNF449Q6P9G9 518 aa8.78□□□□□ -1
CD46-208ENST00000367042 FOXR2Q6PJQ5 311 aa8.78□□□□□ -1
CD46-208ENST00000367042 ARHGEF19Q8IW93 802 aa8.78□□□□□ -1
CD46-208ENST00000367042 SPDL1Q96EA4 605 aa8.78□□□□□ -1
CD46-208ENST00000367042 PGM2Q96G03 612 aa8.78□□□□□ -1
CD46-208ENST00000367042 C9orf72Q96LT7 481 aa8.78□□□□□ -1
CD46-208ENST00000367042 P2RX7Q99572 595 aaKnown RBP8.78□□□□□ -1
CD46-208ENST00000367042 PLVAPQ9BX97 442 aa8.78□□□□□ -1
CD46-208ENST00000367042 ATF5Q9Y2D1 282 aaPredicted RBP8.78□□□□□ -1
CD46-208ENST00000367042 POC1B-GALNT4F8VUJ3 575 aa8.78□□□□□ -1
CD46-208ENST00000367042 H0Y3Z8 333 aa8.78□□□□□ -1
CD46-208ENST00000367042 ASAP2O43150 1006 aa8.78□□□□□ -1
CD46-208ENST00000367042 SGPL1O95470 568 aa8.78□□□□□ -1
CD46-208ENST00000367042 NUDT17P0C025 328 aa8.78□□□□□ -1
CD46-208ENST00000367042 GHRP10912 638 aa8.78□□□□□ -1
CD46-208ENST00000367042 NQO1P15559 274 aaKnown RBP8.78□□□□□ -1
CD46-208ENST00000367042 VCAM1P19320 739 aa8.78□□□□□ -1
CD46-208ENST00000367042 SSTR3P32745 418 aaPredicted RBP8.78□□□□□ -1
CD46-208ENST00000367042 LACTB2Q53H82 288 aaPredicted RBP8.78□□□□□ -1
CD46-208ENST00000367042 CDC42EP5Q6NZY7 148 aa8.78□□□□□ -1
CD46-208ENST00000367042 ZNF365Q70YC5 407 aa8.78□□□□□ -1
CD46-208ENST00000367042 EXOC3L1Q86VI1 746 aa8.78□□□□□ -1
CD46-208ENST00000367042 FAM20AQ96MK3 541 aa8.78□□□□□ -1
CD46-208ENST00000367042 DBNDD1Q9H9R9 158 aa8.78□□□□□ -1
CD46-208ENST00000367042 ETNK1Q9HBU6 452 aa8.78□□□□□ -1
CD46-208ENST00000367042 NOP53Q9NZM5 478 aaKnown RBP8.78□□□□□ -1
CD46-208ENST00000367042 PCDHAC2Q9Y5I4 1007 aa8.78□□□□□ -1
CD46-208ENST00000367042 SBF2Q86WG5 1849 aa8.78□□□□□ -1
CD46-208ENST00000367042 DLEC1Q9Y238 1755 aa8.78□□□□□ -1
CD46-208ENST00000367042 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.77□□□□□ -1
CD46-208ENST00000367042 MGRN1O60291 552 aa8.77□□□□□ -1
CD46-208ENST00000367042 SNX3O60493 162 aa8.77□□□□□ -1
CD46-208ENST00000367042 SPAG7O75391 227 aa8.77□□□□□ -1
CD46-208ENST00000367042 SERPINB2P05120 415 aa8.77□□□□□ -1
CD46-208ENST00000367042 RARAP10276 462 aa8.77□□□□□ -1
CD46-208ENST00000367042 NEFHP12036 1026 aa8.77□□□□□ -1
CD46-208ENST00000367042 ANXA13P27216 316 aa8.77□□□□□ -1
CD46-208ENST00000367042 RWDD2BP57060 319 aa8.77□□□□□ -1
CD46-208ENST00000367042 POU5F1Q01860 360 aaKnown RBP8.77□□□□□ -1
CD46-208ENST00000367042 PPATQ06203 517 aa8.77□□□□□ -1
CD46-208ENST00000367042 ITIH4Q14624 930 aa8.77□□□□□ -1
CD46-208ENST00000367042 CNGA2Q16280 664 aa8.77□□□□□ -1
CD46-208ENST00000367042 SYDE2Q5VT97 1194 aa8.77□□□□□ -1
CD46-208ENST00000367042 DAB2IPQ5VWQ8 1189 aa8.77□□□□□ -1
CD46-208ENST00000367042 SPATA21Q7Z572 469 aa8.77□□□□□ -1
CD46-208ENST00000367042 CROCCP2Q86T23 111 aa8.77□□□□□ -1
CD46-208ENST00000367042 TAB3Q8N5C8 712 aaPredicted RBP8.77□□□□□ -1
CD46-208ENST00000367042 SLC17A8Q8NDX2 589 aa8.77□□□□□ -1
CD46-208ENST00000367042 ZNF577Q9BSK1 485 aa8.77□□□□□ -1
CD46-208ENST00000367042 TRIM7Q9C029 511 aa8.77□□□□□ -1
CD46-208ENST00000367042 ATP6V0A4Q9HBG4 840 aa8.77□□□□□ -1
CD46-208ENST00000367042 GRHL1Q9NZI5 618 aa8.77□□□□□ -1
CD46-208ENST00000367042 ANAPC7Q9UJX3 599 aa8.77□□□□□ -1
CD46-208ENST00000367042 KIAA1551Q9HCM1 1747 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 TAF1LQ8IZX4 1826 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 LAMB1P07942 1786 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 KIF1CO43896 1103 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms