RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 SLC39A4Q6P5W5 647 aa24.46■■□□□ 1.51
LDB1-201ENST00000361198 LBX2Q6XYB7 198 aa24.46■■□□□ 1.51
LDB1-201ENST00000361198 IFT20Q8IY31 132 aa24.46■■□□□ 1.51
LDB1-201ENST00000361198 LOC285556D6RIA3 1793 aa24.46■■□□□ 1.51
LDB1-201ENST00000361198 OPA1O60313 960 aa24.46■■□□□ 1.51
LDB1-201ENST00000361198 MXI1P50539 228 aa24.46■■□□□ 1.51
LDB1-201ENST00000361198 CYFIP1Q7L576 1253 aa24.46■■□□□ 1.51
LDB1-201ENST00000361198 FMNL3Q8IVF7 1028 aa24.46■■□□□ 1.51
LDB1-201ENST00000361198 TSEN2Q8NCE0 465 aaKnown RBP24.46■■□□□ 1.51
LDB1-201ENST00000361198 ZNF526Q8TF50 670 aaPredicted RBP24.46■■□□□ 1.51
LDB1-201ENST00000361198 MAF1Q9H063 256 aa24.46■■□□□ 1.51
LDB1-201ENST00000361198 BTBD7Q9P203 1132 aa24.46■■□□□ 1.51
LDB1-201ENST00000361198 A0A0A6YYK5 440 aaPredicted RBP24.45■■□□□ 1.5
LDB1-201ENST00000361198 GLI1P08151 1106 aa24.45■■□□□ 1.5
LDB1-201ENST00000361198 PPFIA1Q13136 1202 aa24.45■■□□□ 1.5
LDB1-201ENST00000361198 KIF22Q14807 665 aa24.45■■□□□ 1.5
LDB1-201ENST00000361198 PTPROQ16827 1216 aa24.45■■□□□ 1.5
LDB1-201ENST00000361198 MIS18BP1Q6P0N0 1132 aa24.45■■□□□ 1.5
LDB1-201ENST00000361198 DNERQ8NFT8 737 aa24.45■■□□□ 1.5
LDB1-201ENST00000361198 ADM5C9JUS6 153 aa24.45■■□□□ 1.5
LDB1-201ENST00000361198 TULP1O00294 542 aaPredicted RBP24.45■■□□□ 1.5
LDB1-201ENST00000361198 CES2O00748 559 aa24.45■■□□□ 1.5
LDB1-201ENST00000361198 SUPT20HL2P0C7V6 817 aa24.45■■□□□ 1.5
LDB1-201ENST00000361198 RPS6KA1Q15418 735 aa24.45■■□□□ 1.5
LDB1-201ENST00000361198 PALB2Q86YC2 1186 aa24.45■■□□□ 1.5
LDB1-201ENST00000361198 MCPH1Q8NEM0 835 aa24.45■■□□□ 1.5
LDB1-201ENST00000361198 CCDC127Q96BQ5 260 aa24.45■■□□□ 1.5
LDB1-201ENST00000361198 KIF4AO95239 1232 aa24.44■■□□□ 1.5
LDB1-201ENST00000361198 MCCD1P59942 119 aaPredicted RBP24.44■■□□□ 1.5
LDB1-201ENST00000361198 IGSF9BQ9UPX0 1349 aa24.44■■□□□ 1.5
LDB1-201ENST00000361198 FAM170AA1A519 330 aa24.44■■□□□ 1.5
LDB1-201ENST00000361198 PMM2O15305 246 aa24.44■■□□□ 1.5
LDB1-201ENST00000361198 TNFAIP3P21580 790 aa24.44■■□□□ 1.5
LDB1-201ENST00000361198 RNASE9P60153 205 aaKnown RBP24.44■■□□□ 1.5
LDB1-201ENST00000361198 MAP2K1Q02750 393 aaPredicted RBP24.44■■□□□ 1.5
LDB1-201ENST00000361198 MTERF2Q49AM1 385 aa24.44■■□□□ 1.5
LDB1-201ENST00000361198 PARD3BQ8TEW8 1205 aa24.44■■□□□ 1.5
LDB1-201ENST00000361198 KAT5Q92993 513 aa24.44■■□□□ 1.5
LDB1-201ENST00000361198 POP1Q99575 1024 aaKnown RBP24.44■■□□□ 1.5
LDB1-201ENST00000361198 ATP6V0A4Q9HBG4 840 aa24.44■■□□□ 1.5
LDB1-201ENST00000361198 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.44■■□□□ 1.52e-11■■■■■ 138.8
LDB1-201ENST00000361198 TAS2R14Q9NYV8 317 aa24.44■■□□□ 1.5
LDB1-201ENST00000361198 KCNK3O14649 394 aa24.43■■□□□ 1.5
LDB1-201ENST00000361198 ATP4AP20648 1035 aa24.43■■□□□ 1.5
LDB1-201ENST00000361198 ICAM3P32942 547 aa24.43■■□□□ 1.5
LDB1-201ENST00000361198 XKR3Q5GH77 459 aa24.43■■□□□ 1.5
LDB1-201ENST00000361198 SEPT14Q6ZU15 432 aa24.43■■□□□ 1.5
LDB1-201ENST00000361198 OSGEPQ9NPF4 335 aa24.43■■□□□ 1.5
LDB1-201ENST00000361198 SEPT11Q9NVA2 429 aaKnown RBP24.43■■□□□ 1.5
LDB1-201ENST00000361198 TMEM59LQ9UK28 342 aa24.43■■□□□ 1.5
LDB1-201ENST00000361198 CSADQ9Y600 493 aa24.43■■□□□ 1.5
LDB1-201ENST00000361198 ABCB4P21439 1286 aa24.42■■□□□ 1.5
LDB1-201ENST00000361198 RTP1P59025 263 aa24.42■■□□□ 1.5
LDB1-201ENST00000361198 SLFN11Q7Z7L1 901 aa24.42■■□□□ 1.5
LDB1-201ENST00000361198 POMGNT1Q8WZA1 660 aa24.42■■□□□ 1.5
LDB1-201ENST00000361198 TAF4BQ92750 862 aa24.42■■□□□ 1.5
LDB1-201ENST00000361198 ADARB2Q9NS39 739 aaKnown RBP24.42■■□□□ 1.5
LDB1-201ENST00000361198 CARSP49589 748 aaKnown RBP24.42■■□□□ 1.5
LDB1-201ENST00000361198 ALDH5A1P51649 535 aaPredicted RBP24.42■■□□□ 1.5
LDB1-201ENST00000361198 TAS1R3Q7RTX0 852 aa24.42■■□□□ 1.5
LDB1-201ENST00000361198 MREGQ8N565 214 aa24.42■■□□□ 1.5
LDB1-201ENST00000361198 SLC20A1Q8WUM9 679 aa24.42■■□□□ 1.5
LDB1-201ENST00000361198 SEMA4DQ92854 862 aa24.42■■□□□ 1.5
LDB1-201ENST00000361198 DCPSQ96C86 337 aaKnown RBP24.42■■□□□ 1.5
LDB1-201ENST00000361198 FBXL18Q96ME1 805 aa24.42■■□□□ 1.5
LDB1-201ENST00000361198 AGPAT1Q99943 283 aa24.42■■□□□ 1.5
LDB1-201ENST00000361198 POLR3FQ9H1D9 316 aaPredicted RBP24.42■■□□□ 1.5
LDB1-201ENST00000361198 TMEM51Q9NW97 253 aa24.42■■□□□ 1.5
LDB1-201ENST00000361198 OTOFQ9HC10 1997 aa24.42■■□□□ 1.5
LDB1-201ENST00000361198 SYNGAP1Q96PV0 1343 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 HNRNPDLO14979 420 aaKnown RBP24.41■■□□□ 1.5
LDB1-201ENST00000361198 HSF2BPO75031 334 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 HEXIM1O94992 359 aaKnown RBP24.41■■□□□ 1.5
LDB1-201ENST00000361198 TMEM253P0C7T8 217 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 IRAK1P51617 712 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 PAK2Q13177 524 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 SULF1Q8IWU6 871 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 IQCKQ8N0W5 287 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 SLC35G2Q8TBE7 412 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 LMBR1Q8WVP7 490 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 MAFBQ9Y5Q3 323 aaPredicted RBP24.41■■□□□ 1.5
LDB1-201ENST00000361198 IRF6O14896 467 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 TRIM66O15016 1216 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 ATG7O95352 703 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 KRT39Q6A163 491 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 DAAM2Q86T65 1068 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 RIOX2Q8IUF8 465 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 USP38Q8NB14 1042 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 RASSF4Q9H2L5 321 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 EPB41L5Q9HCM4 733 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 ZNF302Q9NR11 478 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 ARHGAP28Q9P2N2 729 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 RSPH14Q9UHP6 348 aa24.41■■□□□ 1.5
LDB1-201ENST00000361198 ZBTB48P10074 688 aaPredicted RBP24.4■■□□□ 1.5
LDB1-201ENST00000361198 GADL1Q6ZQY3 521 aa24.4■■□□□ 1.5
LDB1-201ENST00000361198 PEX26Q7Z412 305 aa24.4■■□□□ 1.5
LDB1-201ENST00000361198 CTNNBL1Q8WYA6 563 aaPredicted RBP24.4■■□□□ 1.5
LDB1-201ENST00000361198 RFFLQ8WZ73 363 aa24.4■■□□□ 1.5
LDB1-201ENST00000361198 IFT74Q96LB3 600 aa24.4■■□□□ 1.5
LDB1-201ENST00000361198 MFSD14AQ96MC6 490 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms