RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 RIOX2Q8IUF8 465 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 MYCBPAPQ8TBZ2 947 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 PARK7Q99497 189 aaKnown RBP13.42□□□□□ -0.26
UBA3-202ENST00000361055 RUSC1Q9BVN2 902 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 DDX47Q9H0S4 455 aaKnown RBP13.42□□□□□ -0.26
UBA3-202ENST00000361055 GOLPH3Q9H4A6 298 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 RBPJLQ9UBG7 517 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 AJAP1Q9UKB5 411 aaPredicted RBP13.42□□□□□ -0.26
UBA3-202ENST00000361055 PCDHB13Q9Y5F0 798 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 RSPH10B2B2RC85 870 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 CLIC2O15247 247 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 CNMDO75829 334 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 FSBPO95073 299 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 TMEM253P0C7T8 217 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 CCDC172P0C7W6 258 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 RSPH10BP0C881 870 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 HOXA13P31271 388 aaPredicted RBP13.42□□□□□ -0.26
UBA3-202ENST00000361055 CTNNA1P35221 906 aaKnown RBP13.42□□□□□ -0.26
UBA3-202ENST00000361055 POU5F1Q01860 360 aaKnown RBP13.42□□□□□ -0.26
UBA3-202ENST00000361055 ZNF844Q08AG5 666 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 CLUL1Q15846 466 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 PAXIP1Q6ZW49 1069 aaPredicted RBP13.42□□□□□ -0.26
UBA3-202ENST00000361055 DDX42Q86XP3 938 aaKnown RBP eCLIP13.42□□□□□ -0.26
UBA3-202ENST00000361055 CHST13Q8NET6 341 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 HSD17B14Q9BPX1 270 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 ACAD9Q9H845 621 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 TUFT1Q9NNX1 390 aa13.42□□□□□ -0.26
UBA3-202ENST00000361055 EVI5O60447 810 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 SLC25A27O95847 323 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 ITGA4P13612 1032 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 COPB2P35606 906 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 GCLCP48506 637 aaPredicted RBP13.41□□□□□ -0.26
UBA3-202ENST00000361055 FNTAP49354 379 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 DEFB115Q30KQ5 88 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 CYP4F22Q6NT55 531 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 FAM186BQ8IYM0 893 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 NEUROG2Q9H2A3 272 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 TXNRD2Q9NNW7 524 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 SEL1LQ9UBV2 794 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 FBXO40Q9UH90 709 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 AMACRQ9UHK6 382 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 UTP11Q9Y3A2 253 aaKnown RBP13.41□□□□□ -0.26
UBA3-202ENST00000361055 NCANO14594 1321 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 GMNCA6NCL1 334 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 IGF2BP3O00425 579 aaKnown RBP eCLIP13.41□□□□□ -0.26
UBA3-202ENST00000361055 DAPK3O43293 454 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 MUTP22033 750 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 GJB7Q6PEY0 223 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 C1orf186Q6ZWK4 172 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 DNAAF5Q86Y56 855 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 IFNL1Q8IU54 200 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 OLIG1Q8TAK6 271 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 LNX1Q8TBB1 728 aaPredicted RBP13.41□□□□□ -0.26
UBA3-202ENST00000361055 SLC35G2Q8TBE7 412 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 RFFLQ8WZ73 363 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 KAT2BQ92831 832 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 NAP1L3Q99457 506 aaPredicted RBP13.41□□□□□ -0.26
UBA3-202ENST00000361055 SYT11Q9BT88 431 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 DMAC2Q9NW81 257 aa13.41□□□□□ -0.26
UBA3-202ENST00000361055 F8VZ95 297 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 MYO1FO00160 1098 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 EML1O00423 815 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 PEX10O60683 326 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 FAM13AO94988 1023 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 ZNF76P36508 570 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 FMO5P49326 533 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 SEC24CP53992 1094 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 KCNA1Q09470 495 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 NOGQ13253 232 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 C6orf89Q6UWU4 347 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 RNF207Q6ZRF8 634 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 CNPY4Q8N129 248 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 MYCT1Q8N699 235 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 MOV10L1Q9BXT6 1211 aaKnown RBP13.4□□□□□ -0.26
UBA3-202ENST00000361055 RGL1Q9NZL6 768 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 SLC12A6Q9UHW9 1150 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 DNAJC12Q9UKB3 198 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 UBE4BO95155 1302 aa13.4□□□□□ -0.26
UBA3-202ENST00000361055 DDX3YO15523 660 aaKnown RBP13.39□□□□□ -0.27
UBA3-202ENST00000361055 BUB1BO60566 1050 aaPredicted RBP13.39□□□□□ -0.27
UBA3-202ENST00000361055 SLITRK3O94933 977 aa13.39□□□□□ -0.27
UBA3-202ENST00000361055 HNRNPH1P31943 449 aaKnown RBP13.39□□□□□ -0.27
UBA3-202ENST00000361055 USP8P40818 1118 aa13.39□□□□□ -0.27
UBA3-202ENST00000361055 TM4SF4P48230 202 aa13.39□□□□□ -0.27
UBA3-202ENST00000361055 GTF2A1P52655 376 aaPredicted RBP13.39□□□□□ -0.27
UBA3-202ENST00000361055 EIF3BP55884 814 aaKnown RBP13.39□□□□□ -0.27
UBA3-202ENST00000361055 RPS6P62753 249 aaKnown RBP13.39□□□□□ -0.27
UBA3-202ENST00000361055 CYP4A11Q02928 519 aa13.39□□□□□ -0.27
UBA3-202ENST00000361055 DRP2Q13474 957 aa13.39□□□□□ -0.27
UBA3-202ENST00000361055 DRAP1Q14919 205 aaPredicted RBP13.39□□□□□ -0.27
UBA3-202ENST00000361055 PPP2R5AQ15172 486 aa13.39□□□□□ -0.27
UBA3-202ENST00000361055 Q3C1V9 767 aa13.39□□□□□ -0.27
UBA3-202ENST00000361055 SWT1Q5T5J6 900 aaKnown RBP13.39□□□□□ -0.27
UBA3-202ENST00000361055 NSMFQ6X4W1 530 aa13.39□□□□□ -0.27
UBA3-202ENST00000361055 STXBP4Q6ZWJ1 553 aa13.39□□□□□ -0.27
UBA3-202ENST00000361055 OTOP1Q7RTM1 612 aa13.39□□□□□ -0.27
UBA3-202ENST00000361055 TMC3Q7Z5M5 1100 aa13.39□□□□□ -0.27
UBA3-202ENST00000361055 NCAPG2Q86XI2 1143 aa13.39□□□□□ -0.27
UBA3-202ENST00000361055 CEP89Q96ST8 783 aa13.39□□□□□ -0.27
UBA3-202ENST00000361055 RAB17Q9H0T7 212 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms