RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 TRIM33Q9UPN9 1127 aa14.34□□□□□ -0.11
NCDN-201ENST00000356090 PODXLO00592 558 aa14.34□□□□□ -0.11
NCDN-201ENST00000356090 DIAPH2O60879 1101 aa14.34□□□□□ -0.11
NCDN-201ENST00000356090 HIP1RO75146 1068 aa14.34□□□□□ -0.11
NCDN-201ENST00000356090 AGTP01019 485 aa14.34□□□□□ -0.11
NCDN-201ENST00000356090 BMP3P12645 472 aa14.34□□□□□ -0.11
NCDN-201ENST00000356090 BRAFP15056 766 aa14.34□□□□□ -0.11
NCDN-201ENST00000356090 NPEPPSP55786 919 aa14.34□□□□□ -0.11
NCDN-201ENST00000356090 KRT17Q04695 432 aa14.34□□□□□ -0.11
NCDN-201ENST00000356090 DAB2IPQ5VWQ8 1189 aa14.34□□□□□ -0.11
NCDN-201ENST00000356090 EPM2AIP1Q7L775 607 aaPredicted RBP14.34□□□□□ -0.11
NCDN-201ENST00000356090 C9orf72Q96LT7 481 aa14.34□□□□□ -0.11
NCDN-201ENST00000356090 CCDC17Q96LX7 622 aa14.34□□□□□ -0.11
NCDN-201ENST00000356090 CBWD1Q9BRT8 395 aa14.34□□□□□ -0.11
NCDN-201ENST00000356090 GAKO14976 1311 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 RPTORQ8N122 1335 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 IRS2Q9Y4H2 1338 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 RIPK2O43353 540 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 TOM1O60784 492 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 FOSP01100 380 aaPredicted RBP14.33□□□□□ -0.12
NCDN-201ENST00000356090 SLMAPQ14BN4 828 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 RPAINQ86UA6 219 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 VSIG1Q86XK7 387 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 C3orf20Q8ND61 904 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 SAAL1Q96ER3 474 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 CDC42EP4Q9H3Q1 356 aaKnown RBP14.33□□□□□ -0.12
NCDN-201ENST00000356090 MCM8Q9UJA3 840 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 DLEC1Q9Y238 1755 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 A8MUI8 341 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 RARAP10276 462 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 VCAM1P19320 739 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 PAX7P23759 505 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 MXI1P50539 228 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 PPATQ06203 517 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 PPP2R5AQ15172 486 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 FAM167BQ9BTA0 163 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.33□□□□□ -0.12
NCDN-201ENST00000356090 PNMA3Q9UL41 463 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 SCN7AQ01118 1682 aa14.33□□□□□ -0.12
NCDN-201ENST00000356090 MIF4GDA9UHW6 222 aaKnown RBP14.32□□□□□ -0.12
NCDN-201ENST00000356090 SLITRK3O94933 977 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 GH1P01241 217 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 COILP38432 576 aaPredicted RBP14.32□□□□□ -0.12
NCDN-201ENST00000356090 MMP13P45452 471 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 CRKP46108 304 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 VAMP7P51809 220 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 SP4Q02446 784 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 AUHQ13825 339 aaKnown RBP14.32□□□□□ -0.12
NCDN-201ENST00000356090 ZNF720Q7Z2F6 126 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 SLC47A2Q86VL8 602 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 ZSWIM2Q8NEG5 633 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 LXNQ9BS40 222 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 HOMER2Q9NSB8 354 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 AGAP1Q9UPQ3 857 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 LAMB1P07942 1786 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 TMEM150BA6NC51 233 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 PPEF1O14829 653 aaPredicted RBP14.32□□□□□ -0.12
NCDN-201ENST00000356090 BBOX1O75936 387 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 POU5F1Q01860 360 aaKnown RBP14.32□□□□□ -0.12
NCDN-201ENST00000356090 XRCC4Q13426 336 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 TMED2Q15363 201 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 DPY19L2P1Q6NXN4 242 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 FAM163AQ96GL9 167 aaPredicted RBP14.32□□□□□ -0.12
NCDN-201ENST00000356090 ZNF317Q96PQ6 595 aaPredicted RBP14.32□□□□□ -0.12
NCDN-201ENST00000356090 GRHL1Q9NZI5 618 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 ANAPC7Q9UJX3 599 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 DIS3Q9Y2L1 958 aaKnown RBP14.32□□□□□ -0.12
NCDN-201ENST00000356090 USP15Q9Y4E8 981 aaPredicted RBP14.32□□□□□ -0.12
NCDN-201ENST00000356090 PHLPP1O60346 1717 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 C5orf60A6NFR6 353 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 POC1B-GALNT4F8VUJ3 575 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 SPAG7O75391 227 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 ANP32DO95626 131 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 RWDD2BP57060 319 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 PPP3CAQ08209 521 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 ZNF365Q70YC5 407 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 PRUNE1Q86TP1 453 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 SLC13A5Q86YT5 568 aaPredicted RBP14.32□□□□□ -0.12
NCDN-201ENST00000356090 LENG9Q96B70 501 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 PGM2Q96G03 612 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 NACC1Q96RE7 527 aa14.32□□□□□ -0.12
NCDN-201ENST00000356090 TGS1Q96RS0 853 aaKnown RBP14.32□□□□□ -0.12
NCDN-201ENST00000356090 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.32□□□□□ -0.12
NCDN-201ENST00000356090 ANXA13P27216 316 aa14.31□□□□□ -0.12
NCDN-201ENST00000356090 SREBF1P36956 1147 aa14.31□□□□□ -0.12
NCDN-201ENST00000356090 LACTBP83111 547 aaPredicted RBP14.31□□□□□ -0.12
NCDN-201ENST00000356090 KAZNQ674X7 775 aa14.31□□□□□ -0.12
NCDN-201ENST00000356090 INTS8Q75QN2 995 aaKnown RBP14.31□□□□□ -0.12
NCDN-201ENST00000356090 EXOC3L1Q86VI1 746 aa14.31□□□□□ -0.12
NCDN-201ENST00000356090 ATXN2LQ8WWM7 1075 aaKnown RBP14.31□□□□□ -0.12
NCDN-201ENST00000356090 RUNDC3BQ96NL0 473 aa14.31□□□□□ -0.12
NCDN-201ENST00000356090 KLHL14Q9P2G3 628 aa14.31□□□□□ -0.12
NCDN-201ENST00000356090 NHSL1Q5SYE7 1610 aa14.31□□□□□ -0.12
NCDN-201ENST00000356090 IGKV6D-41A0A0C4DH26 115 aa14.31□□□□□ -0.12
NCDN-201ENST00000356090 SRRM3A6NNA2 597 aaPredicted RBP14.31□□□□□ -0.12
NCDN-201ENST00000356090 PAEPP09466 180 aa14.31□□□□□ -0.12
NCDN-201ENST00000356090 ALDH5A1P51649 535 aaPredicted RBP14.31□□□□□ -0.12
NCDN-201ENST00000356090 MTM1Q13496 603 aa14.31□□□□□ -0.12
NCDN-201ENST00000356090 CNGA2Q16280 664 aa14.31□□□□□ -0.12
NCDN-201ENST00000356090 RBM26Q5T8P6 1007 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms