RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 RBM46Q8TBY0 533 aaKnown RBP16.04■□□□□ 0.16
TRAF3-202ENST00000351691 DNAJC9Q8WXX5 260 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 GLG1Q92896 1179 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 FAM136AQ96C01 138 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 CCDC113Q9H0I3 377 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 CPVLQ9H3G5 476 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 DBR1Q9UK59 544 aaKnown RBP16.04■□□□□ 0.16
TRAF3-202ENST00000351691 DAGLAQ9Y4D2 1042 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 LTBP1Q14766 1721 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 KLRG2A4D1S0 409 aaPredicted RBP16.04■□□□□ 0.16
TRAF3-202ENST00000351691 TRAFD1O14545 582 aaPredicted RBP16.04■□□□□ 0.16
TRAF3-202ENST00000351691 VCAM1P19320 739 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 YARSP54577 528 aaKnown RBP16.04■□□□□ 0.16
TRAF3-202ENST00000351691 HADHBP55084 474 aaKnown RBP16.04■□□□□ 0.16
TRAF3-202ENST00000351691 MGAT5Q09328 741 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 SETDB1Q15047 1291 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 ZC3H12AQ5D1E8 599 aaKnown RBP16.04■□□□□ 0.16
TRAF3-202ENST00000351691 SLC27A3Q5K4L6 730 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 PPP1R15BQ5SWA1 713 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 HYIQ5T013 277 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 CGB2Q6NT52 195 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 FAM43BQ6ZT52 329 aaPredicted RBP16.04■□□□□ 0.16
TRAF3-202ENST00000351691 ARHGAP22Q7Z5H3 698 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 EZH1Q92800 747 aaPredicted RBP16.04■□□□□ 0.16
TRAF3-202ENST00000351691 TRIM4Q9C037 500 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 IRAK4Q9NWZ3 460 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 USP20Q9Y2K6 914 aa16.04■□□□□ 0.16
TRAF3-202ENST00000351691 PNMA6FA0A0J9YX94 578 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 MIF4GDA9UHW6 222 aaKnown RBP16.03■□□□□ 0.16
TRAF3-202ENST00000351691 ECE2O60344 883 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 TTLL1O95922 423 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 ACTN1P12814 892 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 GYS1P13807 737 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 SLC9A1P19634 815 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 RASSF2P50749 326 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 PTPROQ16827 1216 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 OR52E8Q6IFG1 317 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 ARHGEF18Q6ZSZ5 1173 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 INTS8Q75QN2 995 aaKnown RBP16.03■□□□□ 0.16
TRAF3-202ENST00000351691 SP8Q8IXZ3 490 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 FAM13CQ8NE31 585 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 SLC35G2Q8TBE7 412 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 SNX29Q8TEQ0 813 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 U2AF1L4Q8WU68 220 aaKnown RBP16.03■□□□□ 0.16
TRAF3-202ENST00000351691 KIFAP3Q92845 792 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 TGS1Q96RS0 853 aaKnown RBP16.03■□□□□ 0.16
TRAF3-202ENST00000351691 FAM192AQ9GZU8 254 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 COA1Q9GZY4 146 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 UBA5Q9GZZ9 404 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 POLLQ9UGP5 575 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 PPP1R9AQ9ULJ8 1098 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 ACTL7BQ9Y614 415 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 GTPBP10A4D1E9 387 aaKnown RBP16.03■□□□□ 0.16
TRAF3-202ENST00000351691 HMGB2P26583 209 aaKnown RBP16.03■□□□□ 0.16
TRAF3-202ENST00000351691 TUBP50607 506 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 POLGP54098 1239 aaPredicted RBP16.03■□□□□ 0.16
TRAF3-202ENST00000351691 LRRC14Q15048 493 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 CYP1B1Q16678 543 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 NUDCD1Q96RS6 583 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 MXD3Q9BW11 206 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 GLT8D2Q9H1C3 349 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 DCLRE1BQ9H816 532 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 ARMCX3Q9UH62 379 aaPredicted RBP16.03■□□□□ 0.16
TRAF3-202ENST00000351691 STARD13Q9Y3M8 1113 aa16.03■□□□□ 0.16
TRAF3-202ENST00000351691 MAGEB2O15479 319 aa16.02■□□□□ 0.16
TRAF3-202ENST00000351691 HNRNPCL1O60812 293 aaKnown RBP16.02■□□□□ 0.16
TRAF3-202ENST00000351691 SLCO1A2P46721 670 aa16.02■□□□□ 0.16
TRAF3-202ENST00000351691 STRN3Q13033 797 aa16.02■□□□□ 0.16
TRAF3-202ENST00000351691 TCEAL1Q15170 157 aa16.02■□□□□ 0.16
TRAF3-202ENST00000351691 EPHA7Q15375 998 aa16.02■□□□□ 0.16
TRAF3-202ENST00000351691 PPP1R21Q6ZMI0 780 aa16.02■□□□□ 0.16
TRAF3-202ENST00000351691 SLC51AQ86UW1 340 aa16.02■□□□□ 0.16
TRAF3-202ENST00000351691 TLE6Q9H808 572 aa16.02■□□□□ 0.16
TRAF3-202ENST00000351691 SIX2Q9NPC8 291 aa16.02■□□□□ 0.16
TRAF3-202ENST00000351691 TMEM260Q9NX78 707 aa16.02■□□□□ 0.16
TRAF3-202ENST00000351691 ZMYND8Q9ULU4 1186 aaPredicted RBP16.02■□□□□ 0.16
TRAF3-202ENST00000351691 LRCH1Q9Y2L9 728 aa16.02■□□□□ 0.16
TRAF3-202ENST00000351691 FGFR4P22455 802 aa16.02■□□□□ 0.15
TRAF3-202ENST00000351691 PTDSS1P48651 473 aaKnown RBP16.02■□□□□ 0.15
TRAF3-202ENST00000351691 ZNF543Q08ER8 600 aa16.02■□□□□ 0.15
TRAF3-202ENST00000351691 KCNK18Q7Z418 384 aa16.02■□□□□ 0.15
TRAF3-202ENST00000351691 OLIG1Q8TAK6 271 aa16.02■□□□□ 0.15
TRAF3-202ENST00000351691 SCFD1Q8WVM8 642 aa16.02■□□□□ 0.15
TRAF3-202ENST00000351691 C7orf43Q8WVR3 580 aa16.02■□□□□ 0.15
TRAF3-202ENST00000351691 ZNF333Q96JL9 665 aa16.02■□□□□ 0.15
TRAF3-202ENST00000351691 LGALS13Q9UHV8 139 aa16.02■□□□□ 0.15
TRAF3-202ENST00000351691 SCOCQ9UIL1 159 aa16.02■□□□□ 0.15
TRAF3-202ENST00000351691 TRAF3IP3Q9Y228 551 aa16.02■□□□□ 0.15
TRAF3-202ENST00000351691 USH1CQ9Y6N9 552 aa16.02■□□□□ 0.15
TRAF3-202ENST00000351691 PFASO15067 1338 aa16.01■□□□□ 0.15
TRAF3-202ENST00000351691 KDM3AQ9Y4C1 1321 aa16.01■□□□□ 0.15
TRAF3-202ENST00000351691 RGPD3A6NKT7 1758 aaPredicted RBP16.01■□□□□ 0.15
TRAF3-202ENST00000351691 RGPD4Q7Z3J3 1758 aa16.01■□□□□ 0.15
TRAF3-202ENST00000351691 STX2P32856 288 aa16.01■□□□□ 0.15
TRAF3-202ENST00000351691 STAT1P42224 750 aa16.01■□□□□ 0.15
TRAF3-202ENST00000351691 PRPF4BQ13523 1007 aaKnown RBP16.01■□□□□ 0.15
TRAF3-202ENST00000351691 RRP1BQ14684 758 aaKnown RBP16.01■□□□□ 0.15
TRAF3-202ENST00000351691 GPATCH4Q5T3I0 446 aaKnown RBP16.01■□□□□ 0.15
TRAF3-202ENST00000351691 PRELID2Q8N945 189 aa16.01■□□□□ 0.15
TRAF3-202ENST00000351691 LNX1Q8TBB1 728 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms