RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 MSANTD4Q8NCY6 345 aa15.02□□□□□ -0.01
TRIM4-201ENST00000349062 DEPTORQ8TB45 409 aa15.02□□□□□ -0.01
TRIM4-201ENST00000349062 TARS2Q9BW92 718 aaKnown RBP15.02□□□□□ -0.01
TRIM4-201ENST00000349062 NOP56O00567 594 aaKnown RBP15.01□□□□□ -0.01
TRIM4-201ENST00000349062 BUB1BO60566 1050 aaPredicted RBP15.01□□□□□ -0.01
TRIM4-201ENST00000349062 BCRP11274 1271 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 ZBTB41Q5SVQ8 909 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 ICE2Q659A1 982 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 VPS33BQ9H267 617 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 RPTORQ8N122 1335 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 GLI1P08151 1106 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 MAP3K10Q02779 954 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 DAB2IPQ5VWQ8 1189 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 B3GNT9Q6UX72 402 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 FAM71BQ8TC56 605 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 STK33Q9BYT3 514 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 CELF4Q9BZC1 486 aaKnown RBP15.01□□□□□ -0.01
TRIM4-201ENST00000349062 ZNF302Q9NR11 478 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 CD2APQ9Y5K6 639 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 LOC102724159A0A0B4J2E5 919 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 GGPS1O95749 300 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 KCNA2P16389 499 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 PWP2Q15269 919 aaKnown RBP15.01□□□□□ -0.01
TRIM4-201ENST00000349062 DPH6Q7L8W6 267 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 C4orf19Q8IY42 314 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 TMEM161BQ8NDZ6 487 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 BORCS6Q96GS4 357 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 CYP26B1Q9NR63 512 aa15.01□□□□□ -0.01
TRIM4-201ENST00000349062 KRIT1O00522 736 aa15□□□□□ -0.01
TRIM4-201ENST00000349062 CYP2C8P10632 490 aa15□□□□□ -0.01
TRIM4-201ENST00000349062 MAGEA9P43362 315 aa15□□□□□ -0.01
TRIM4-201ENST00000349062 MNAT1P51948 309 aa15□□□□□ -0.01
TRIM4-201ENST00000349062 TMEM130Q8N3G9 435 aa15□□□□□ -0.01
TRIM4-201ENST00000349062 NEK9Q8TD19 979 aa15□□□□□ -0.01
TRIM4-201ENST00000349062 RUFY1Q96T51 708 aa15□□□□□ -0.01
TRIM4-201ENST00000349062 EFCC1Q9HA90 598 aa15□□□□□ -0.01
TRIM4-201ENST00000349062 MMEP08473 750 aa15□□□□□ -0.01
TRIM4-201ENST00000349062 SFNP31947 248 aa15□□□□□ -0.01
TRIM4-201ENST00000349062 GGCXP38435 758 aa15□□□□□ -0.01
TRIM4-201ENST00000349062 STRN3Q13033 797 aa15□□□□□ -0.01
TRIM4-201ENST00000349062 MIS18BP1Q6P0N0 1132 aa15□□□□□ -0.01
TRIM4-201ENST00000349062 FBXO16Q8IX29 292 aaPredicted RBP15□□□□□ -0.01
TRIM4-201ENST00000349062 NLRP4Q96MN2 994 aa15□□□□□ -0.01
TRIM4-201ENST00000349062 SNCAIPQ9Y6H5 919 aa15□□□□□ -0.01
TRIM4-201ENST00000349062 H0YHG0 523 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 K7ERI5 159 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 MAP9Q49MG5 647 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 C9orf131Q5VYM1 1079 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 SLC7A3Q8WY07 619 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 PSD3Q9NYI0 1048 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 AMACRQ9UHK6 382 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 AFG3L2Q9Y4W6 797 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 C19orf81C9J6K1 198 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 FGGP02679 453 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 CD58P19256 250 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 EMC2Q15006 297 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 SCARA3Q6AZY7 606 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 TPCN2Q8NHX9 752 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 SYN2Q92777 582 aaPredicted RBP14.99□□□□□ -0.01
TRIM4-201ENST00000349062 FAM107BQ9H098 131 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 ATP6V0A4Q9HBG4 840 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 XPNPEP1Q9NQW7 623 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 BCCIPQ9P287 314 aaKnown RBP eCLIP14.99□□□□□ -0.01
TRIM4-201ENST00000349062 EXOC7Q9UPT5 735 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 KIF4AO95239 1232 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 FAM153BP0C7A2 387 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 FAM153CQ494X1 144 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 GPC2Q8N158 579 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 UHMK1Q8TAS1 419 aaKnown RBP14.99□□□□□ -0.01
TRIM4-201ENST00000349062 FAM153AQ9UHL3 310 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 TRPC6Q9Y210 931 aa14.99□□□□□ -0.01
TRIM4-201ENST00000349062 BZW2Q9Y6E2 419 aaKnown RBP14.99□□□□□ -0.01
TRIM4-201ENST00000349062 PFASO15067 1338 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 PJA2O43164 708 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 ZEB2O60315 1214 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 LCA5LO95447 670 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 NLRP11P59045 1033 aaKnown RBP14.98□□□□□ -0.01
TRIM4-201ENST00000349062 Q3C1V9 767 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 DPY19L2P1Q6NXN4 242 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 SCARA5Q6ZMJ2 495 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 CCNI2Q6ZMN8 369 aaPredicted RBP14.98□□□□□ -0.01
TRIM4-201ENST00000349062 RNF10Q8N5U6 811 aaKnown RBP14.98□□□□□ -0.01
TRIM4-201ENST00000349062 PPM1EQ8WY54 764 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 INPP4AQ96PE3 977 aaPredicted RBP14.98□□□□□ -0.01
TRIM4-201ENST00000349062 AGPAT1Q99943 283 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 DMAC2Q9NW81 257 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 FBXO40Q9UH90 709 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 AMFRQ9UKV5 643 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 RAB21Q9UL25 225 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 COL2A1P02458 1487 aaPredicted RBP14.98□□□□□ -0.01
TRIM4-201ENST00000349062 RAD51CO43502 376 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 MARCKSL1P49006 195 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 SV2AQ7L0J3 742 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 THNSL1Q8IYQ7 743 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 ASAP3Q8TDY4 903 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 CPA5Q8WXQ8 436 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 KCND2Q9NZV8 630 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 STIM2Q9P246 746 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 DBR1Q9UK59 544 aaKnown RBP14.98□□□□□ -0.01
TRIM4-201ENST00000349062 DOCK5Q9H7D0 1870 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms