RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CACNG4Q9UBN1 327 aa17.77■□□□□ 0.44
RAB5C-201ENST00000346213 H3BQ06 376 aaPredicted RBP17.77■□□□□ 0.43
RAB5C-201ENST00000346213 FSCN2O14926 492 aa17.77■□□□□ 0.43
RAB5C-201ENST00000346213 HIP1RO75146 1068 aa17.77■□□□□ 0.43
RAB5C-201ENST00000346213 SLC12A3P55017 1021 aa17.77■□□□□ 0.43
RAB5C-201ENST00000346213 CTC1Q2NKJ3 1217 aa17.77■□□□□ 0.43
RAB5C-201ENST00000346213 TIGD5Q53EQ6 642 aa17.77■□□□□ 0.43
RAB5C-201ENST00000346213 SPOUT1Q5T280 376 aaKnown RBP17.77■□□□□ 0.43
RAB5C-201ENST00000346213 CLIC6Q96NY7 704 aa17.77■□□□□ 0.43
RAB5C-201ENST00000346213 USP28Q96RU2 1077 aa17.77■□□□□ 0.43
RAB5C-201ENST00000346213 PDZD7Q9H5P4 517 aa17.77■□□□□ 0.43
RAB5C-201ENST00000346213 TFIP11Q9UBB9 837 aaKnown RBP17.77■□□□□ 0.43
RAB5C-201ENST00000346213 FBXO2Q9UK22 296 aaPredicted RBP17.77■□□□□ 0.43
RAB5C-201ENST00000346213 SFI1A8K8P3 1242 aa17.76■□□□□ 0.43
RAB5C-201ENST00000346213 KCNA5P22460 613 aa17.76■□□□□ 0.43
RAB5C-201ENST00000346213 MARCKSP29966 332 aaPredicted RBP17.76■□□□□ 0.43
RAB5C-201ENST00000346213 SLC11A1P49279 550 aa17.76■□□□□ 0.43
RAB5C-201ENST00000346213 BCAR1P56945 870 aa17.76■□□□□ 0.43
RAB5C-201ENST00000346213 MRPS5P82675 430 aaKnown RBP17.76■□□□□ 0.43
RAB5C-201ENST00000346213 CEBPZQ03701 1054 aaKnown RBP17.76■□□□□ 0.43
RAB5C-201ENST00000346213 TFDP1Q14186 410 aa17.76■□□□□ 0.43
RAB5C-201ENST00000346213 PTPROQ16827 1216 aa17.76■□□□□ 0.43
RAB5C-201ENST00000346213 NOMO2Q5JPE7 1267 aa17.76■□□□□ 0.43
RAB5C-201ENST00000346213 NT5DC1Q5TFE4 455 aa17.76■□□□□ 0.43
RAB5C-201ENST00000346213 KRT79Q5XKE5 535 aa17.76■□□□□ 0.43
RAB5C-201ENST00000346213 ARL6IP4Q66PJ3 421 aaKnown RBP17.76■□□□□ 0.43
RAB5C-201ENST00000346213 PPP4R3CPQ6ZMV5 832 aa17.76■□□□□ 0.43
RAB5C-201ENST00000346213 FAM43BQ6ZT52 329 aaPredicted RBP17.76■□□□□ 0.43
RAB5C-201ENST00000346213 LEO1Q8WVC0 666 aaPredicted RBP17.76■□□□□ 0.43
RAB5C-201ENST00000346213 SPATA32Q96LK8 384 aa17.76■□□□□ 0.43
RAB5C-201ENST00000346213 ZNF396Q96N95 335 aaPredicted RBP17.76■□□□□ 0.43
RAB5C-201ENST00000346213 CSRNP2Q9H175 543 aa17.76■□□□□ 0.43
RAB5C-201ENST00000346213 CNTNAP2Q9UHC6 1331 aa17.76■□□□□ 0.43
RAB5C-201ENST00000346213 A0A1B0GUA9 196 aa17.75■□□□□ 0.43
RAB5C-201ENST00000346213 HIDE1A8MVS5 230 aa17.75■□□□□ 0.43
RAB5C-201ENST00000346213 ERLIN2O94905 339 aa17.75■□□□□ 0.43
RAB5C-201ENST00000346213 NPTXRO95502 500 aa17.75■□□□□ 0.43
RAB5C-201ENST00000346213 AKAP5P24588 427 aa17.75■□□□□ 0.43
RAB5C-201ENST00000346213 MLH1P40692 756 aa17.75■□□□□ 0.43
RAB5C-201ENST00000346213 KARSQ15046 597 aaKnown RBP17.75■□□□□ 0.43
RAB5C-201ENST00000346213 GAS2L3Q86XJ1 694 aa17.75■□□□□ 0.43
RAB5C-201ENST00000346213 THNSL1Q8IYQ7 743 aa17.75■□□□□ 0.43
RAB5C-201ENST00000346213 ADAMTS19Q8TE59 1207 aa17.75■□□□□ 0.43
RAB5C-201ENST00000346213 EPSTI1Q96J88 318 aa17.75■□□□□ 0.43
RAB5C-201ENST00000346213 LMAN2LQ9H0V9 348 aa17.75■□□□□ 0.43
RAB5C-201ENST00000346213 RSAD1Q9HA92 442 aa17.75■□□□□ 0.43
RAB5C-201ENST00000346213 CD320Q9NPF0 282 aa17.75■□□□□ 0.43
RAB5C-201ENST00000346213 A0A087X0B3 334 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 PER2O15055 1255 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 MEFVO15553 781 aaPredicted RBP17.74■□□□□ 0.43
RAB5C-201ENST00000346213 ZC3H11AO75152 810 aaKnown RBP eCLIP17.74■□□□□ 0.43
RAB5C-201ENST00000346213 POMCP01189 267 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 LAG3P18627 525 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 IGFBP6P24592 240 aaPredicted RBP17.74■□□□□ 0.43
RAB5C-201ENST00000346213 NAMPTP43490 491 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 NPTX2P47972 431 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 NAALADL2Q58DX5 795 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 NOTUMQ6P988 496 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 RBM23Q86U06 439 aaKnown RBP17.74■□□□□ 0.43
RAB5C-201ENST00000346213 CABP7Q86V35 215 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 ABI1Q8IZP0 508 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 GAD1Q99259 594 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 APOL6Q9BWW8 343 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 GBP3Q9H0R5 595 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 HOXA2O43364 376 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 PRKCBP05771 671 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 GALTP07902 379 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 IL9P15248 144 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 LIG1P18858 919 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 PLCG1P19174 1290 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 MRE11P49959 708 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 RAB27AP51159 221 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 SCNN1GP51170 649 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 PLCB3Q01970 1234 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 CLUL1Q15846 466 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 FAM187BQ17R55 369 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 AUTS2Q8WXX7 1259 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 KHSRPQ92945 711 aaKnown RBP eCLIP17.74■□□□□ 0.43
RAB5C-201ENST00000346213 ZNF558Q96NG5 402 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 IGFLR1Q9H665 355 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 MARCH5Q9NX47 278 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 KLK14Q9P0G3 267 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 CLEC1BQ9P126 229 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 RCOR1Q9UKL0 485 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 DNM3Q9UQ16 869 aa17.74■□□□□ 0.43
RAB5C-201ENST00000346213 TCF20Q9UGU0 1960 aaKnown RBP17.73■□□□□ 0.43
RAB5C-201ENST00000346213 BDP1A6H8Y1 2624 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 ARL5CA6NH57 179 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 ABLIM1O14639 778 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 INPPL1O15357 1258 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 PLA2G4BP0C869 781 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 NRIP1P48552 1158 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 PEX3P56589 373 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 PLPP4Q5VZY2 271 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 GLB1LQ6UWU2 654 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 TMEM130Q8N3G9 435 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 CEP120Q8N960 986 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 SYT2Q8N9I0 419 aaPredicted RBP17.73■□□□□ 0.43
RAB5C-201ENST00000346213 MRPS27Q92552 414 aaKnown RBP17.73■□□□□ 0.43
RAB5C-201ENST00000346213 RABGGTAQ92696 567 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms