RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 TRIM55Q9BYV6 548 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 RBM12Q9NTZ6 932 aaKnown RBP16.5■□□□□ 0.23
SRPK1-201ENST00000346162 ADCY3O60266 1144 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 KLRK1P26718 216 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 EEPD1Q7L9B9 569 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 AFAP1L2Q8N4X5 818 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 MDM1Q8TC05 714 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 CLMNQ96JQ2 1002 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 TMEM165Q9HC07 324 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 SEL1LQ9UBV2 794 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 FEM1BQ9UK73 627 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 PACSIN2Q9UNF0 486 aaPredicted RBP16.49■□□□□ 0.23
SRPK1-201ENST00000346162 TACC3Q9Y6A5 838 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 ITIH6Q6UXX5 1313 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 DYTNA2CJ06 578 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 PODXLO00592 558 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 PDE5AO76074 875 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 SRGNP10124 158 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 MMGT1Q8N4V1 131 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 RAPGEF5Q92565 580 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 PPWD1Q96BP3 646 aaKnown RBP16.49■□□□□ 0.23
SRPK1-201ENST00000346162 MS4A14Q96JA4 679 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 KDM4CQ9H3R0 1056 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 ZC4H2Q9NQZ6 224 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 RASA4BC9J798 803 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 IPO5O00410 1097 aaKnown RBP16.49■□□□□ 0.23
SRPK1-201ENST00000346162 RASA4O43374 803 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 ZWINTO95229 277 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 ZCCHC18P0CG32 403 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 AGBL2Q5U5Z8 902 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 RAVER2Q9HCJ3 691 aaKnown RBP16.49■□□□□ 0.23
SRPK1-201ENST00000346162 TBC1D22BQ9NU19 505 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 HPSEQ9Y251 543 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 GOLGA8SH3BPF8 625 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 VHLP40337 213 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 AARSP49588 968 aaKnown RBP eCLIP16.49■□□□□ 0.23
SRPK1-201ENST00000346162 ARL10Q8N8L6 244 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 EIF2AK1Q9BQI3 630 aaKnown RBP16.49■□□□□ 0.23
SRPK1-201ENST00000346162 RIOK1Q9BRS2 568 aaKnown RBP16.49■□□□□ 0.23
SRPK1-201ENST00000346162 SIKE1Q9BRV8 207 aa16.49■□□□□ 0.23
SRPK1-201ENST00000346162 DDX20Q9UHI6 824 aaKnown RBP16.49■□□□□ 0.23
SRPK1-201ENST00000346162 DMGDHQ9UI17 866 aaKnown RBP16.49■□□□□ 0.23
SRPK1-201ENST00000346162 DIS3Q9Y2L1 958 aaKnown RBP16.49■□□□□ 0.23
SRPK1-201ENST00000346162 WDR64B1ANS9 1081 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 M0QZ92 97 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 ACADSP16219 412 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 JAK3P52333 1124 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 DPY19L2Q6NUT2 758 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 GIMAP8Q8ND71 665 aaPredicted RBP16.48■□□□□ 0.23
SRPK1-201ENST00000346162 MAML1Q92585 1016 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 ERP27Q96DN0 273 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 ANAPC5Q9UJX4 755 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 NUB1Q9Y5A7 615 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 RGS9BPQ6ZS82 235 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 BARGINQ6ZT62 677 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 AGPAT5Q9NUQ2 364 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 NXF1Q9UBU9 619 aaKnown RBP16.48■□□□□ 0.23
SRPK1-201ENST00000346162 HERC5Q9UII4 1024 aaKnown RBP16.48■□□□□ 0.23
SRPK1-201ENST00000346162 ABCB11O95342 1321 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 MYMKA6NI61 221 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 ATICP31939 592 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 MKRN3Q13064 507 aaKnown RBP16.48■□□□□ 0.23
SRPK1-201ENST00000346162 TAF12Q16514 161 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 PDXDC1Q6P996 788 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 ANO5Q75V66 913 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 ANKRD36BP1Q96IX9 119 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 RMDN2Q96LZ7 410 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 PPARGC1AQ9UBK2 798 aaKnown RBP16.48■□□□□ 0.23
SRPK1-201ENST00000346162 AMACRQ9UHK6 382 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 CNTNAP4Q9C0A0 1308 aa16.48■□□□□ 0.23
SRPK1-201ENST00000346162 MGEA5O60502 916 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 P4HBP07237 508 aaKnown RBP16.47■□□□□ 0.23
SRPK1-201ENST00000346162 NTRK3Q16288 839 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 LRRC36Q1X8D7 754 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 DRC3Q9H069 523 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 PFDN4Q9NQP4 134 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 MRPS9P82933 396 aaKnown RBP16.47■□□□□ 0.23
SRPK1-201ENST00000346162 PPP1R2P3Q6NXS1 205 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 DNAJC24Q6P3W2 148 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 EPM2AIP1Q7L775 607 aaPredicted RBP16.47■□□□□ 0.23
SRPK1-201ENST00000346162 PDZD8Q8NEN9 1154 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 C2CD2Q9Y426 696 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 TTLL3Q9Y4R7 772 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 GPR75-ASB3A0A0A6YYF3 556 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 GYPCP04921 128 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 GSTA1P08263 222 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 QARSP47897 775 aaKnown RBP16.47■□□□□ 0.23
SRPK1-201ENST00000346162 TOB1P50616 345 aaPredicted RBP16.47■□□□□ 0.23
SRPK1-201ENST00000346162 DALRD3Q5D0E6 543 aaKnown RBP16.47■□□□□ 0.23
SRPK1-201ENST00000346162 KIAA2013Q8IYS2 634 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 HACE1Q8IYU2 909 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 ICA1LQ8NDH6 482 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 MCPH1Q8NEM0 835 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 SLC5A4Q9NY91 659 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 SPATA31A5Q5VU36 1347 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 SPATA31A7Q8IWB4 1347 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 H7C0C1 242 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 ATP5OP48047 213 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 SMYD3Q9H7B4 428 aa16.47■□□□□ 0.23
SRPK1-201ENST00000346162 SGK1O00141 431 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms