RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 A0A0U1RQF3 1178 aa15.2■□□□□ 0.02
TPM4-202ENST00000344824 SYCE3A1L190 88 aa15.2■□□□□ 0.02
TPM4-202ENST00000344824 ATF7P17544 494 aaPredicted RBP15.2■□□□□ 0.02
TPM4-202ENST00000344824 PTENP60484 403 aa15.2■□□□□ 0.02
TPM4-202ENST00000344824 MBTD1Q05BQ5 628 aa15.2■□□□□ 0.02
TPM4-202ENST00000344824 POSTNQ15063 836 aa15.2■□□□□ 0.02
TPM4-202ENST00000344824 KANK3Q6NY19 840 aa15.2■□□□□ 0.02
TPM4-202ENST00000344824 THNSL1Q8IYQ7 743 aa15.2■□□□□ 0.02
TPM4-202ENST00000344824 LRRC43Q8N309 656 aa15.2■□□□□ 0.02
TPM4-202ENST00000344824 BSNDQ8WZ55 320 aa15.2■□□□□ 0.02
TPM4-202ENST00000344824 CLP1Q92989 425 aaKnown RBP15.2■□□□□ 0.02
TPM4-202ENST00000344824 CUEDC2Q9H467 287 aa15.2■□□□□ 0.02
TPM4-202ENST00000344824 TYW1Q9NV66 732 aaKnown RBP15.2■□□□□ 0.02
TPM4-202ENST00000344824 HOOK1Q9UJC3 728 aaKnown RBP15.2■□□□□ 0.02
TPM4-202ENST00000344824 GRM6O15303 877 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 TSPAN1O60635 241 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 EYA4O95677 639 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 LINC00271P0C7V0 271 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 PLA2G4BP0C869 781 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 CYP11B2P19099 503 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 FAM189BP81408 668 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 NCBP1Q09161 790 aaKnown RBP15.19■□□□□ 0.02
TPM4-202ENST00000344824 CLLU1OSQ5K130 101 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 EP400NLQ6ZTU2 488 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 SV2BQ7L1I2 683 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 CDR2LQ86X02 465 aaPredicted RBP15.19■□□□□ 0.02
TPM4-202ENST00000344824 DEPTORQ8TB45 409 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 MRPL38Q96DV4 380 aaKnown RBP15.19■□□□□ 0.02
TPM4-202ENST00000344824 IFT74Q96LB3 600 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 CASD1Q96PB1 797 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 RUSC1Q9BVN2 902 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 APOL6Q9BWW8 343 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 TRIM6Q9C030 488 aaPredicted RBP15.19■□□□□ 0.02
TPM4-202ENST00000344824 AAASQ9NRG9 546 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 RNF19AQ9NV58 838 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 PCDHB12Q9Y5F1 795 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 SPTBN5Q9NRC6 3674 aaKnown RBP15.19■□□□□ 0.02
TPM4-202ENST00000344824 TRIP11Q15643 1979 aa15.19■□□□□ 0.02
TPM4-202ENST00000344824 MEIS3P2A8K0S8 358 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 B4GALT5O43286 388 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 RB1P06400 928 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 SKIP12755 728 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 LAG3P18627 525 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 PBX3P40426 434 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 RAD51AP2Q09MP3 1159 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 CUL4BQ13620 913 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 TIGD5Q53EQ6 642 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 ZNF598Q86UK7 904 aaKnown RBP15.18■□□□□ 0.02
TPM4-202ENST00000344824 KLHL23Q8NBE8 558 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 COLGALT1Q8NBJ5 622 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 KIFC3Q9BVG8 833 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 GBP3Q9H0R5 595 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 MAGEF1Q9HAY2 307 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 LMCD1Q9NZU5 365 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 PCDHB2Q9Y5E7 798 aa15.18■□□□□ 0.02
TPM4-202ENST00000344824 C5orf67F2Z3F1 127 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 BIN1O00499 593 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 EOMESO95936 686 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 ITGB1P05556 798 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 PRKCBP05771 671 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 POU3F3P20264 500 aaPredicted RBP15.17■□□□□ 0.02
TPM4-202ENST00000344824 RNASELQ05823 741 aaKnown RBP15.17■□□□□ 0.02
TPM4-202ENST00000344824 PPP2R5AQ15172 486 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 NOTUMQ6P988 496 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 DYMQ7RTS9 669 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 GPBP1Q86WP2 473 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 KIFAP3Q92845 792 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 PGBD4Q96DM1 585 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 PLVAPQ9BX97 442 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 EIF2AQ9BY44 585 aaKnown RBP15.17■□□□□ 0.02
TPM4-202ENST00000344824 MRPL9Q9BYD2 267 aaKnown RBP15.17■□□□□ 0.02
TPM4-202ENST00000344824 C2orf40Q9H1Z8 148 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 KBTBD4Q9NVX7 518 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 NPHP3-ACAD11A0A0J9YXS1 232 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 MYMKA6NI61 221 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 CCDC169A6NNP5 214 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 HIP1RO75146 1068 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 ZC3H11AO75152 810 aaKnown RBP eCLIP15.17■□□□□ 0.02
TPM4-202ENST00000344824 LETM1O95202 739 aaPredicted RBP15.17■□□□□ 0.02
TPM4-202ENST00000344824 NPTXRO95502 500 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 KRT18P05783 430 aaKnown RBP15.17■□□□□ 0.02
TPM4-202ENST00000344824 ARF4P18085 180 aaPredicted RBP15.17■□□□□ 0.02
TPM4-202ENST00000344824 AXLP30530 894 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 HOXA11P31270 313 aaPredicted RBP15.17■□□□□ 0.02
TPM4-202ENST00000344824 CA8P35219 290 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 NAMPTP43490 491 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 SLC12A3P55017 1021 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 ASIC1P78348 528 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 AMPD3Q01432 767 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 ISM2Q6H9L7 571 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 GLB1LQ6UWU2 654 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 IFNLR1Q8IU57 520 aaPredicted RBP15.17■□□□□ 0.02
TPM4-202ENST00000344824 SMARCE1Q969G3 411 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 ZNF558Q96NG5 402 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 NSUN3Q9H649 340 aaKnown RBP15.17■□□□□ 0.02
TPM4-202ENST00000344824 CWH43Q9H720 699 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 RSAD1Q9HA92 442 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 PRMT7Q9NVM4 692 aaPredicted RBP15.17■□□□□ 0.02
TPM4-202ENST00000344824 KIAA1468Q9P260 1216 aa15.17■□□□□ 0.02
TPM4-202ENST00000344824 PCDHA5Q9Y5H7 936 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms