RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 GLB1LQ6UWU2 654 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 CDR2LQ86X02 465 aaPredicted RBP15.98■□□□□ 0.15
HMGN3-202ENST00000344726 PGBD4Q96DM1 585 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 RAB34Q9BZG1 259 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 CSRNP2Q9H175 543 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 PRKAG3Q9UGI9 489 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 HES2Q9Y543 173 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 IPPQ9Y573 584 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 GTF3C3Q9Y5Q9 886 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 C2orf71A6NGG8 1288 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 EDN1P05305 212 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 GALTP07902 379 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 KRT17Q04695 432 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 KRT79Q5XKE5 535 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 PDE12Q6L8Q7 609 aaKnown RBP15.97■□□□□ 0.15
HMGN3-202ENST00000344726 LLGL2Q6P1M3 1020 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 TMC7Q7Z402 723 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 AUTS2Q8WXX7 1259 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 CCDC51Q96ER9 411 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 IGSF21Q96ID5 467 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 PNMA5Q96PV4 448 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 CDCA3Q99618 268 aaPredicted RBP15.97■□□□□ 0.15
HMGN3-202ENST00000344726 LRFN3Q9BTN0 628 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 C1QTNF1Q9BXJ1 281 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 GBP3Q9H0R5 595 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 ZBP1Q9H171 429 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 RSAD1Q9HA92 442 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 PUF60Q9UHX1 559 aaKnown RBP15.97■□□□□ 0.15
HMGN3-202ENST00000344726 CDH22Q9UJ99 828 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 USP20Q9Y2K6 914 aa15.97■□□□□ 0.15
HMGN3-202ENST00000344726 USP15Q9Y4E8 981 aaPredicted RBP15.97■□□□□ 0.15
HMGN3-202ENST00000344726 MYH15Q9Y2K3 1946 aa15.96■□□□□ 0.15
HMGN3-202ENST00000344726 A0A1B0GUA9 196 aa15.96■□□□□ 0.15
HMGN3-202ENST00000344726 VWA3AA6NCI4 1184 aa15.96■□□□□ 0.15
HMGN3-202ENST00000344726 POMCP01189 267 aa15.96■□□□□ 0.15
HMGN3-202ENST00000344726 ALDH7A1P49419 539 aaKnown RBP15.96■□□□□ 0.15
HMGN3-202ENST00000344726 SYCE2Q6PIF2 218 aa15.96■□□□□ 0.15
HMGN3-202ENST00000344726 TMEM184AQ6ZMB5 413 aa15.96■□□□□ 0.15
HMGN3-202ENST00000344726 MRPL43Q8N983 215 aaKnown RBP15.96■□□□□ 0.15
HMGN3-202ENST00000344726 FEZF2Q8TBJ5 459 aa15.96■□□□□ 0.15
HMGN3-202ENST00000344726 RSPH1Q8WYR4 309 aa15.96■□□□□ 0.15
HMGN3-202ENST00000344726 KIFC3Q9BVG8 833 aa15.96■□□□□ 0.15
HMGN3-202ENST00000344726 CCDC113Q9H0I3 377 aa15.96■□□□□ 0.15
HMGN3-202ENST00000344726 FZD8Q9H461 694 aa15.96■□□□□ 0.15
HMGN3-202ENST00000344726 NXF3Q9H4D5 531 aaKnown RBP15.96■□□□□ 0.15
HMGN3-202ENST00000344726 NGRNQ9NPE2 291 aaKnown RBP15.96■□□□□ 0.15
HMGN3-202ENST00000344726 MIOSQ9NXC5 875 aa15.96■□□□□ 0.15
HMGN3-202ENST00000344726 FAM50BQ9Y247 325 aa15.96■□□□□ 0.15
HMGN3-202ENST00000344726 STK24Q9Y6E0 443 aa15.96■□□□□ 0.15
HMGN3-202ENST00000344726 CNTNAP2Q9UHC6 1331 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 VPS37CA5D8V6 355 aaPredicted RBP15.95■□□□□ 0.14
HMGN3-202ENST00000344726 INPPL1O15357 1258 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 ITGA4P13612 1032 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 NAMPTP43490 491 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 RNASELQ05823 741 aaKnown RBP15.95■□□□□ 0.14
HMGN3-202ENST00000344726 SMC1AQ14683 1233 aaKnown RBP15.95■□□□□ 0.14
HMGN3-202ENST00000344726 FAM187BQ17R55 369 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 HYIQ5T013 277 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 ARL6IP4Q66PJ3 421 aaKnown RBP15.95■□□□□ 0.14
HMGN3-202ENST00000344726 ANKRD54Q6NXT1 300 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 BRAPQ7Z569 592 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 DAW1Q8N136 415 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 VPS52Q8N1B4 723 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 SUSD6Q92537 303 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 TMEM169Q96HH4 297 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 ZFP42Q96MM3 310 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 RUSC1Q9BVN2 902 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 APOL5Q9BWW9 433 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 S1PR5Q9H228 398 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 PRMT7Q9NVM4 692 aaPredicted RBP15.95■□□□□ 0.14
HMGN3-202ENST00000344726 MARCH5Q9NX47 278 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 DNM3Q9UQ16 869 aa15.95■□□□□ 0.14
HMGN3-202ENST00000344726 ARL5CA6NH57 179 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 F8W810 466 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 CLASP2O75122 1294 aaKnown RBP15.94■□□□□ 0.14
HMGN3-202ENST00000344726 NPTXRO95502 500 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 MLH1P40692 756 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 GRIN1Q05586 938 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 NCBP1Q09161 790 aaKnown RBP15.94■□□□□ 0.14
HMGN3-202ENST00000344726 MAPK7Q13164 816 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 ZRSR1Q15695 479 aaKnown RBP15.94■□□□□ 0.14
HMGN3-202ENST00000344726 RINT1Q6NUQ1 792 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 SLC27A1Q6PCB7 646 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 C1orf186Q6ZWK4 172 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 DDX53Q86TM3 631 aaKnown RBP15.94■□□□□ 0.14
HMGN3-202ENST00000344726 ZBTB8OSQ8IWT0 167 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 CNNM3Q8NE01 707 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 GSTCDQ8NEC7 633 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 URGCPQ8TCY9 931 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 PRIMPOLQ96LW4 560 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 GAD1Q99259 594 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 PLIN2Q99541 437 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 APOL6Q9BWW8 343 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 C2orf40Q9H1Z8 148 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 PDZD7Q9H5P4 517 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 HCFC2Q9Y5Z7 792 aa15.94■□□□□ 0.14
HMGN3-202ENST00000344726 K7ELQ4 463 aaPredicted RBP15.93■□□□□ 0.14
HMGN3-202ENST00000344726 NRP1O14786 923 aa15.93■□□□□ 0.14
HMGN3-202ENST00000344726 GPR37L1O60883 481 aa15.93■□□□□ 0.14
HMGN3-202ENST00000344726 HIP1RO75146 1068 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms