RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 KLK14Q9P0G3 267 aa14.52□□□□□ -0.09
TUBD1-202ENST00000340993 MSRAQ9UJ68 235 aa14.52□□□□□ -0.09
TUBD1-202ENST00000340993 GDAQ9Y2T3 454 aa14.52□□□□□ -0.09
TUBD1-202ENST00000340993 NLRC5Q86WI3 1866 aa14.52□□□□□ -0.09
TUBD1-202ENST00000340993 CNTNAP2Q9UHC6 1331 aa14.52□□□□□ -0.09
TUBD1-202ENST00000340993 ACKR2O00590 384 aa14.51□□□□□ -0.09
TUBD1-202ENST00000340993 PRPF6O94906 941 aaKnown RBP14.51□□□□□ -0.09
TUBD1-202ENST00000340993 ATF7P17544 494 aaPredicted RBP14.51□□□□□ -0.09
TUBD1-202ENST00000340993 EFNA5P52803 228 aa14.51□□□□□ -0.09
TUBD1-202ENST00000340993 ZNF568Q3ZCX4 644 aa14.51□□□□□ -0.09
TUBD1-202ENST00000340993 ISM2Q6H9L7 571 aa14.51□□□□□ -0.09
TUBD1-202ENST00000340993 SPIRE2Q8WWL2 714 aa14.51□□□□□ -0.09
TUBD1-202ENST00000340993 GBP4Q96PP9 640 aa14.51□□□□□ -0.09
TUBD1-202ENST00000340993 FIZ1Q96SL8 496 aa14.51□□□□□ -0.09
TUBD1-202ENST00000340993 PYM1Q9BRP8 204 aaKnown RBP14.51□□□□□ -0.09
TUBD1-202ENST00000340993 MRPL4Q9BYD3 311 aaKnown RBP14.51□□□□□ -0.09
TUBD1-202ENST00000340993 NFKBIZQ9BYH8 718 aa14.51□□□□□ -0.09
TUBD1-202ENST00000340993 C17orf75Q9HAS0 396 aa14.51□□□□□ -0.09
TUBD1-202ENST00000340993 REV3LO60673 3130 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 HNRNPDLO14979 420 aaKnown RBP14.5□□□□□ -0.09
TUBD1-202ENST00000340993 AFF1P51825 1210 aaKnown RBP14.5□□□□□ -0.09
TUBD1-202ENST00000340993 POU5F1BQ06416 359 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 CAMK4Q16566 473 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 LRIT3Q3SXY7 679 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 SPOUT1Q5T280 376 aaKnown RBP14.5□□□□□ -0.09
TUBD1-202ENST00000340993 PPP2R2DQ66LE6 453 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 NPAS4Q8IUM7 802 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 NELFCDQ8IXH7 590 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 CEP120Q8N960 986 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 TIFAQ96CG3 184 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 LRRC27Q9C0I9 530 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 GBP3Q9H0R5 595 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 MAGEF1Q9HAY2 307 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 C1orf112Q9NSG2 853 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 EXOC1Q9NV70 894 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 PARP2Q9UGN5 583 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 TBX20Q9UMR3 447 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 IPPQ9Y573 584 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 TDRD15B5MCY1 1934 aaKnown RBP14.5□□□□□ -0.09
TUBD1-202ENST00000340993 FAM237AA0A1B0GTK4 181 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 A0A1W2PPC1 479 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 KINO60870 393 aaKnown RBP14.5□□□□□ -0.09
TUBD1-202ENST00000340993 STAG3L1P0CL83 205 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 GAP43P17677 238 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 PBX3P40426 434 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 LIG4P49917 911 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 UBE2HP62256 183 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 BTG3Q14201 252 aaPredicted RBP14.5□□□□□ -0.09
TUBD1-202ENST00000340993 KMT5BQ4FZB7 885 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 CLLU1OSQ5K130 101 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 SLC27A1Q6PCB7 646 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 PPP4R3CPQ6ZMV5 832 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 THNSL1Q8IYQ7 743 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 ABI1Q8IZP0 508 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 TMEM87AQ8NBN3 555 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 SMG8Q8ND04 991 aaKnown RBP14.5□□□□□ -0.09
TUBD1-202ENST00000340993 ENGASEQ8NFI3 743 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 ACO2Q99798 780 aaKnown RBP14.5□□□□□ -0.09
TUBD1-202ENST00000340993 CXCL16Q9H2A7 254 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 CHST12Q9NRB3 414 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 SNTG2Q9NY99 539 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 MAPK8IP1Q9UQF2 711 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 CITO14578 2027 aa14.5□□□□□ -0.09
TUBD1-202ENST00000340993 TRANK1O15050 2925 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 COL4A6Q14031 1691 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 MYO7AQ13402 2215 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 A0A0U1RQF3 1178 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 N4BP3O15049 544 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 GTPBP6O43824 516 aaPredicted RBP14.49□□□□□ -0.09
TUBD1-202ENST00000340993 KLRC4O43908 158 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 RPN1P04843 607 aaKnown RBP14.49□□□□□ -0.09
TUBD1-202ENST00000340993 MLH1P40692 756 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 POSTNQ15063 836 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 FAM26FQ5R3K3 315 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 UNC13DQ70J99 1090 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 ZNF720Q7Z2F6 126 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 TMEM192Q8IY95 271 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 SMYD4Q8IYR2 804 aaPredicted RBP14.49□□□□□ -0.09
TUBD1-202ENST00000340993 SYCP3Q8IZU3 236 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 PHOSPHO2Q8TCD6 241 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 ARNTL2Q8WYA1 636 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 PRIMPOLQ96LW4 560 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 RAD9AQ99638 391 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 ADPGKQ9BRR6 497 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 TMEM134Q9H6X4 195 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 PRUNE2Q8WUY3 3088 aa14.49□□□□□ -0.09
TUBD1-202ENST00000340993 A0A1B0GUA9 196 aa14.48□□□□□ -0.09
TUBD1-202ENST00000340993 FRMD3A2A2Y4 597 aa14.48□□□□□ -0.09
TUBD1-202ENST00000340993 ANKRD63C9JTQ0 380 aa14.48□□□□□ -0.09
TUBD1-202ENST00000340993 RFXAPO00287 272 aa14.48□□□□□ -0.09
TUBD1-202ENST00000340993 DGKIO75912 1065 aa14.48□□□□□ -0.09
TUBD1-202ENST00000340993 POMCP01189 267 aa14.48□□□□□ -0.09
TUBD1-202ENST00000340993 ITGA4P13612 1032 aa14.48□□□□□ -0.09
TUBD1-202ENST00000340993 AXLP30530 894 aa14.48□□□□□ -0.09
TUBD1-202ENST00000340993 FXR1P51114 621 aaKnown RBP eCLIP14.48□□□□□ -0.09
TUBD1-202ENST00000340993 SMAD3P84022 425 aaKnown RBP14.48□□□□□ -0.09
TUBD1-202ENST00000340993 FAM187BQ17R55 369 aa14.48□□□□□ -0.09
TUBD1-202ENST00000340993 L1TD1Q5T7N2 865 aaKnown RBP14.48□□□□□ -0.09
TUBD1-202ENST00000340993 ZFP42Q96MM3 310 aa14.48□□□□□ -0.09
TUBD1-202ENST00000340993 NTPCRQ9BSD7 190 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms