RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 DIAPH2O60879 1101 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 PHF2O75151 1096 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 EIF3BP55884 814 aaKnown RBP17.34■□□□□ 0.37
SCARB1-202ENST00000339570 LMBRD2Q68DH5 695 aaPredicted RBP17.34■□□□□ 0.37
SCARB1-202ENST00000339570 TEKT1Q969V4 418 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 PI4K2AQ9BTU6 479 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 CARD9Q9H257 536 aa17.34■□□□□ 0.37
SCARB1-202ENST00000339570 CDC42EP4Q9H3Q1 356 aaKnown RBP17.34■□□□□ 0.37
SCARB1-202ENST00000339570 TOPORSQ9NS56 1045 aaPredicted RBP17.34■□□□□ 0.37
SCARB1-202ENST00000339570 COL22A1Q8NFW1 1626 aaPredicted RBP17.34■□□□□ 0.37
SCARB1-202ENST00000339570 IGKV6D-41A0A0C4DH26 115 aa17.33■□□□□ 0.37
SCARB1-202ENST00000339570 BTNL10A8MVZ5 291 aa17.33■□□□□ 0.37
SCARB1-202ENST00000339570 RIPK2O43353 540 aa17.33■□□□□ 0.37
SCARB1-202ENST00000339570 HIP1RO75146 1068 aa17.33■□□□□ 0.37
SCARB1-202ENST00000339570 ARP10275 920 aa17.33■□□□□ 0.37
SCARB1-202ENST00000339570 AUHQ13825 339 aaKnown RBP17.33■□□□□ 0.37
SCARB1-202ENST00000339570 TRIM68Q6AZZ1 485 aa17.33■□□□□ 0.37
SCARB1-202ENST00000339570 RNF207Q6ZRF8 634 aa17.33■□□□□ 0.37
SCARB1-202ENST00000339570 EXOC3L1Q86VI1 746 aa17.33■□□□□ 0.37
SCARB1-202ENST00000339570 AGAP11Q8TF27 550 aa17.33■□□□□ 0.37
SCARB1-202ENST00000339570 EMC10Q5UCC4 262 aa17.33■□□□□ 0.36
SCARB1-202ENST00000339570 CES2O00748 559 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 ERFP50548 548 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 KRT17Q04695 432 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 BFSP1Q12934 665 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 GRIPAP1Q4V328 841 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 SGO2Q562F6 1265 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 SYDE2Q5VT97 1194 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 ARHGAP27Q6ZUM4 889 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 PAGR1Q9BTK6 254 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 CHST7Q9NS84 486 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 VAV3Q9UKW4 847 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 GAKO14976 1311 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 ALDH5A1P51649 535 aaPredicted RBP17.32■□□□□ 0.36
SCARB1-202ENST00000339570 PPP2R5AQ15172 486 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 ZNF564Q8TBZ8 553 aaPredicted RBP17.32■□□□□ 0.36
SCARB1-202ENST00000339570 ZSWIM1Q9BR11 485 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 PLCD4Q9BRC7 762 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 PFASO15067 1338 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 ATXN2Q99700 1313 aaKnown RBP17.32■□□□□ 0.36
SCARB1-202ENST00000339570 PPIP5K2O43314 1243 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 THAP12O43422 761 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 ANP32DO95626 131 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 MMP13P45452 471 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 GPC5P78333 572 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 ZNF720Q7Z2F6 126 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 LXNQ9BS40 222 aa17.32■□□□□ 0.36
SCARB1-202ENST00000339570 TDRD3Q9H7E2 651 aaKnown RBP17.32■□□□□ 0.36
SCARB1-202ENST00000339570 BCRP11274 1271 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 STX2P32856 288 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 ADCY8P40145 1251 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 PTGIRP43119 386 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 SOX10P56693 466 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 DRP2Q13474 957 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 PLCB4Q15147 1175 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 CNGA2Q16280 664 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 C6orf118Q5T5N4 469 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 KAZNQ674X7 775 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 NOP9Q86U38 636 aaKnown RBP17.31■□□□□ 0.36
SCARB1-202ENST00000339570 PASD1Q8IV76 773 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.31■□□□□ 0.361e-10■■■■■ 60.3
SCARB1-202ENST00000339570 ZNF577Q9BSK1 485 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 TTC7AQ9ULT0 858 aaPredicted RBP17.31■□□□□ 0.36
SCARB1-202ENST00000339570 H0Y3Z8 333 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 BRAFP15056 766 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 COILP38432 576 aaPredicted RBP17.31■□□□□ 0.36
SCARB1-202ENST00000339570 CRKP46108 304 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 ABCB5Q2M3G0 1257 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 APOBEC3HQ6NTF7 200 aaKnown RBP17.31■□□□□ 0.36
SCARB1-202ENST00000339570 OLIG1Q8TAK6 271 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 TAOK3Q9H2K8 898 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 MTUS1Q9ULD2 1270 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 A0A0A6YYK5 440 aaPredicted RBP17.31■□□□□ 0.36
SCARB1-202ENST00000339570 C5orf60A6NFR6 353 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 GJB6O95452 261 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 C1orf186Q6ZWK4 172 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 MICAL1Q8TDZ2 1067 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 SPOCK2Q92563 424 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 LRRC4BQ9NT99 713 aa17.31■□□□□ 0.36
SCARB1-202ENST00000339570 SLC16A4O15374 487 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 SLC16A3O15427 465 aaKnown RBP17.3■□□□□ 0.36
SCARB1-202ENST00000339570 ECEL1O95672 775 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 KRT16P08779 473 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 ADCY2Q08462 1091 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 XRCC4Q13426 336 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 TMED2Q15363 201 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 ZNF449Q6P9G9 518 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 CYP4X1Q8N118 509 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 HAUS1Q96CS2 278 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 NSRP1Q9H0G5 558 aaKnown RBP17.3■□□□□ 0.36
SCARB1-202ENST00000339570 KDM4CQ9H3R0 1056 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 FBXO28Q9NVF7 368 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 POC1B-GALNT4F8VUJ3 575 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 O00370 1275 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
SCARB1-202ENST00000339570 BMP3P12645 472 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 SIAH1Q8IUQ4 282 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 CPXCR1Q8N123 301 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 ACER1Q8TDN7 264 aa17.3■□□□□ 0.36
SCARB1-202ENST00000339570 RMDN2Q96LZ7 410 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms