RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 RPA1P27694 616 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 CCT6AP40227 531 aaKnown RBP10.74□□□□□ -0.69
SYN3-201ENST00000332840 PHKA2P46019 1235 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 RAB27AP51159 221 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 NPEPPSP55786 919 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 TPM4P67936 248 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 NCBP1Q09161 790 aaKnown RBP10.74□□□□□ -0.69
SYN3-201ENST00000332840 GRB10Q13322 594 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 TMEM119Q4V9L6 283 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 EPC2Q52LR7 807 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 SV2BQ7L1I2 683 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 SRGAP1Q7Z6B7 1085 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 RTN4RL1Q86UN2 441 aaPredicted RBP10.74□□□□□ -0.69
SYN3-201ENST00000332840 TMEM192Q8IY95 271 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 CRIPAKQ8N1N5 446 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 KCTD17Q8N5Z5 321 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 MCPH1Q8NEM0 835 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 STAMQ92783 540 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 CLP1Q92989 425 aaKnown RBP10.74□□□□□ -0.69
SYN3-201ENST00000332840 CCDC47Q96A33 483 aaKnown RBP10.74□□□□□ -0.69
SYN3-201ENST00000332840 ZNF689Q96CS4 500 aaPredicted RBP10.74□□□□□ -0.69
SYN3-201ENST00000332840 PDLIM2Q96JY6 352 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 PNMA5Q96PV4 448 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 PLIN2Q99541 437 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 TRAIPQ9BWF2 469 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 GTPBP4Q9BZE4 634 aaKnown RBP10.74□□□□□ -0.69
SYN3-201ENST00000332840 LMAN2LQ9H0V9 348 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 CDHR5Q9HBB8 845 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 AAASQ9NRG9 546 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 RMND1Q9NWS8 449 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 DBR1Q9UK59 544 aaKnown RBP10.74□□□□□ -0.69
SYN3-201ENST00000332840 MTCH2Q9Y6C9 303 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 TRIOO75962 3097 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 MYO7AQ13402 2215 aa10.74□□□□□ -0.69
SYN3-201ENST00000332840 DOCK5Q9H7D0 1870 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 A0A087WZ62 844 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 A0A0U1RQF3 1178 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 C5orf67F2Z3F1 127 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 H3BNC9 293 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 IKBKBO14920 756 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 EOMESO95936 686 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 CTNNB1P35222 781 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 RARRES1P49788 294 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 FAM189BP81408 668 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 PLCB2Q00722 1185 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 POU5F1BQ06416 359 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 DRP2Q13474 957 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 CUL4BQ13620 913 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 DSC3Q14574 896 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 AAK1Q2M2I8 961 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 TIGD5Q53EQ6 642 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 CATSPER4Q7RTX7 472 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 DHX40Q8IX18 779 aaKnown RBP10.73□□□□□ -0.69
SYN3-201ENST00000332840 ABI1Q8IZP0 508 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 AOPEPQ8N6M6 819 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 PRPF31Q8WWY3 499 aaKnown RBP10.73□□□□□ -0.69
SYN3-201ENST00000332840 LARP4BQ92615 738 aaKnown RBP10.73□□□□□ -0.69
SYN3-201ENST00000332840 MRPL38Q96DV4 380 aaKnown RBP10.73□□□□□ -0.69
SYN3-201ENST00000332840 FAM212AQ96EL1 285 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 NLRP4Q96MN2 994 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 C7orf25Q9BPX7 421 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 SH2D3AQ9BRG2 576 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 FDXACB1Q9BRP7 624 aaPredicted RBP10.73□□□□□ -0.69
SYN3-201ENST00000332840 C17orf80Q9BSJ5 609 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 BLZF1Q9H2G9 400 aa10.73□□□□□ -0.69
SYN3-201ENST00000332840 ARHGEF35A5YM69 484 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 EPOPA6NHQ4 379 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 ATMINO43313 823 aaPredicted RBP10.72□□□□□ -0.69
SYN3-201ENST00000332840 MGEA5O60502 916 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 LPXNO60711 386 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 ERLIN2O94905 339 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 ADCY5O95622 1261 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 RPN1P04843 607 aaKnown RBP10.72□□□□□ -0.69
SYN3-201ENST00000332840 SPATA31C1P0DKV0 1188 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 BMP6P22004 513 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 ERCC5P28715 1186 aaPredicted RBP10.72□□□□□ -0.69
SYN3-201ENST00000332840 CASP1P29466 404 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 BMPR1AP36894 532 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 LAMTOR4Q0VGL1 99 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 KCNB1Q14721 858 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 CATSPER3Q86XQ3 398 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 LRRC43Q8N309 656 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 RNF149Q8NC42 400 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 GDPD5Q8WTR4 605 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 RAD54LQ92698 747 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 KHSRPQ92945 711 aaKnown RBP eCLIP10.72□□□□□ -0.69
SYN3-201ENST00000332840 P2RX5Q93086 422 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 PPP2R3CQ969Q6 453 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 TMEM143Q96AN5 459 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 CCDC51Q96ER9 411 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 LRFN3Q9BTN0 628 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 MRPL9Q9BYD2 267 aaKnown RBP10.72□□□□□ -0.69
SYN3-201ENST00000332840 NFKBIZQ9BYH8 718 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 TMEM117Q9H0C3 514 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 IFT122Q9HBG6 1241 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 BLOC1S4Q9NUP1 217 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 COG5Q9UP83 839 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 PIN4Q9Y237 131 aaKnown RBP10.72□□□□□ -0.69
SYN3-201ENST00000332840 PIEZO1Q92508 2521 aa10.72□□□□□ -0.69
SYN3-201ENST00000332840 MAP3K13O43283 966 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms