RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 ABRAQ8N0Z2 381 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 TXLNBQ8N3L3 684 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 TRAPPC12Q8WVT3 735 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 SEMA4DQ92854 862 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 KCNN1Q92952 543 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 PARK7Q99497 189 aaKnown RBP19.41■□□□□ 0.7
ACTB-201ENST00000331789 SMARCAD1Q9H4L7 1026 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 STYXL1Q9Y6J8 313 aa19.41■□□□□ 0.7
ACTB-201ENST00000331789 FOXN3O00409 490 aaPredicted RBP19.4■□□□□ 0.7
ACTB-201ENST00000331789 PMM2O15305 246 aa19.4■□□□□ 0.7
ACTB-201ENST00000331789 BUB1O43683 1085 aa19.4■□□□□ 0.7
ACTB-201ENST00000331789 PAPD7Q5XG87 772 aaKnown RBP19.4■□□□□ 0.7
ACTB-201ENST00000331789 SRGAP1Q7Z6B7 1085 aa19.4■□□□□ 0.7
ACTB-201ENST00000331789 LRRC71Q8N4P6 559 aa19.4■□□□□ 0.7
ACTB-201ENST00000331789 TARS2Q9BW92 718 aaKnown RBP19.4■□□□□ 0.7
ACTB-201ENST00000331789 LUC7LQ9NQ29 371 aaKnown RBP19.4■□□□□ 0.7
ACTB-201ENST00000331789 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.4■□□□□ 0.7
ACTB-201ENST00000331789 PPME1Q9Y570 386 aa19.4■□□□□ 0.7
ACTB-201ENST00000331789 EXTL3O43909 919 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 ADCY3O60266 1144 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 SRGAP2O75044 1071 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 SNAI1O95863 264 aaPredicted RBP19.39■□□□□ 0.7
ACTB-201ENST00000331789 KIAA0753Q2KHM9 967 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 IER5Q5VY09 327 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 KRT39Q6A163 491 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 RSRC2Q7L4I2 434 aaKnown RBP19.39■□□□□ 0.7
ACTB-201ENST00000331789 DPP9Q86TI2 863 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 TRIM58Q8NG06 486 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 OLIG1Q8TAK6 271 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 ZBTB10Q96DT7 871 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 FAM84AQ96KN4 292 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 KATNBL1Q9H079 304 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 TMEM134Q9H6X4 195 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 VTA1Q9NP79 307 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 NAGPAQ9UK23 515 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 TRPC6Q9Y210 931 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 DAAM1Q9Y4D1 1078 aa19.39■□□□□ 0.7
ACTB-201ENST00000331789 EVPLQ92817 2033 aa19.39■□□□□ 0.69
ACTB-201ENST00000331789 IGKV6-21A0A0C4DH24 114 aa19.39■□□□□ 0.69
ACTB-201ENST00000331789 ZNF233A6NK53 670 aa19.39■□□□□ 0.69
ACTB-201ENST00000331789 DDX3XO00571 662 aaKnown RBP eCLIP19.39■□□□□ 0.691e-323■□□□□ 8.9
ACTB-201ENST00000331789 PIGRP01833 764 aa19.39■□□□□ 0.69
ACTB-201ENST00000331789 DLATP10515 647 aaKnown RBP19.39■□□□□ 0.69
ACTB-201ENST00000331789 KLRC1P26715 233 aa19.39■□□□□ 0.69
ACTB-201ENST00000331789 HUNKP57058 714 aa19.39■□□□□ 0.69
ACTB-201ENST00000331789 NAB2Q15742 525 aa19.39■□□□□ 0.69
ACTB-201ENST00000331789 WHAMMP3Q1A5X7 153 aa19.39■□□□□ 0.69
ACTB-201ENST00000331789 TEX35Q5T0J7 233 aa19.39■□□□□ 0.69
ACTB-201ENST00000331789 CEP112Q8N8E3 955 aa19.39■□□□□ 0.69
ACTB-201ENST00000331789 PSPC1Q8WXF1 523 aaKnown RBP19.39■□□□□ 0.69
ACTB-201ENST00000331789 KAT5Q92993 513 aa19.39■□□□□ 0.69
ACTB-201ENST00000331789 EPC1Q9H2F5 836 aa19.39■□□□□ 0.69
ACTB-201ENST00000331789 TMEM8AQ9HCN3 771 aa19.39■□□□□ 0.69
ACTB-201ENST00000331789 AGO2Q9UKV8 859 aaKnown RBP19.39■□□□□ 0.69
ACTB-201ENST00000331789 NENFQ9UMX5 172 aa19.39■□□□□ 0.69
ACTB-201ENST00000331789 SAR1BQ9Y6B6 198 aa19.39■□□□□ 0.69
ACTB-201ENST00000331789 RBM47A0AV96 593 aaKnown RBP19.38■□□□□ 0.69
ACTB-201ENST00000331789 ECM2O94769 699 aaPredicted RBP19.38■□□□□ 0.69
ACTB-201ENST00000331789 ITGBL1O95965 494 aaPredicted RBP19.38■□□□□ 0.69
ACTB-201ENST00000331789 SRGAP2CP0DJJ0 459 aa19.38■□□□□ 0.69
ACTB-201ENST00000331789 SCP2P22307 547 aa19.38■□□□□ 0.69
ACTB-201ENST00000331789 RFX1P22670 979 aa19.38■□□□□ 0.69
ACTB-201ENST00000331789 ADCYAP1R1P41586 468 aa19.38■□□□□ 0.69
ACTB-201ENST00000331789 ACOT2P49753 483 aa19.38■□□□□ 0.69
ACTB-201ENST00000331789 NAP1L1P55209 391 aaKnown RBP19.38■□□□□ 0.69
ACTB-201ENST00000331789 NLRP11P59045 1033 aaKnown RBP19.38■□□□□ 0.69
ACTB-201ENST00000331789 LAMTOR4Q0VGL1 99 aa19.38■□□□□ 0.69
ACTB-201ENST00000331789 LAMC2Q13753 1193 aa19.38■□□□□ 0.69
ACTB-201ENST00000331789 GRB14Q14449 540 aa19.38■□□□□ 0.69
ACTB-201ENST00000331789 ALKBH5Q6P6C2 394 aaKnown RBP19.38■□□□□ 0.69
ACTB-201ENST00000331789 PLEKHH3Q7Z736 793 aa19.38■□□□□ 0.69
ACTB-201ENST00000331789 ZNF467Q7Z7K2 595 aaPredicted RBP19.38■□□□□ 0.69
ACTB-201ENST00000331789 PDCL2Q8N4E4 241 aa19.38■□□□□ 0.69
ACTB-201ENST00000331789 LNX1Q8TBB1 728 aaPredicted RBP19.38■□□□□ 0.69
ACTB-201ENST00000331789 RNPEPQ9H4A4 650 aa19.38■□□□□ 0.69
ACTB-201ENST00000331789 TRPM7Q96QT4 1865 aa19.38■□□□□ 0.69
ACTB-201ENST00000331789 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.37■□□□□ 0.69
ACTB-201ENST00000331789 ANO9A1A5B4 782 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 TTLL13PA6NNM8 815 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 GH1P01241 217 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 ANXA13P27216 316 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 MATR3P43243 847 aaKnown RBP eCLIP19.37■□□□□ 0.69
ACTB-201ENST00000331789 WNT7BP56706 349 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 CHMP4BP1P59074 171 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 FAM110CQ1W6H9 321 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 C10orf76Q5T2E6 689 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 CRELD2Q6UXH1 353 aaPredicted RBP19.37■□□□□ 0.69
ACTB-201ENST00000331789 RNF10Q8N5U6 811 aaKnown RBP19.37■□□□□ 0.69
ACTB-201ENST00000331789 U2AF1L4Q8WU68 220 aaKnown RBP19.37■□□□□ 0.69
ACTB-201ENST00000331789 TCP11Q8WWU5 503 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 ZNF516Q92618 1163 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 ELMO3Q96BJ8 720 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 NOX5Q96PH1 765 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 CPA4Q9UI42 421 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 HBP1O60381 514 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 GTF2H1P32780 548 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 SLC26A2P50443 739 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 ZBTB41Q5SVQ8 909 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 SLFN12LQ6IEE8 588 aa19.37■□□□□ 0.69
ACTB-201ENST00000331789 SV2AQ7L0J3 742 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms