RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 LIG4P49917 911 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 MXI1P50539 228 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 CETN1Q12798 172 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 STRN3Q13033 797 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 ARHGAP44Q17R89 818 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 GPR142Q7Z601 462 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 FAM213AQ9BRX8 229 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 SMARCAD1Q9H4L7 1026 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 UBE2TQ9NPD8 197 aaPredicted RBP18.4■□□□□ 0.54
DDX41-201ENST00000330503 NMRK2Q9NPI5 230 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 ADCY3O60266 1144 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 SNAI1O95863 264 aaPredicted RBP18.4■□□□□ 0.54
DDX41-201ENST00000330503 ANXA13P27216 316 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 MAP2K1Q02750 393 aaPredicted RBP18.4■□□□□ 0.54
DDX41-201ENST00000330503 NAB2Q15742 525 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 IER5Q5VY09 327 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 SRGAP1Q7Z6B7 1085 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 ZNF467Q7Z7K2 595 aaPredicted RBP18.4■□□□□ 0.54
DDX41-201ENST00000330503 TXLNBQ8N3L3 684 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 SLC30A5Q8TAD4 765 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 SYT11Q9BT88 431 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 VTA1Q9NP79 307 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.4■□□□□ 0.54
DDX41-201ENST00000330503 NAGPAQ9UK23 515 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 COQ4Q9Y3A0 265 aa18.4■□□□□ 0.54
DDX41-201ENST00000330503 DDX3XO00571 662 aaKnown RBP eCLIP18.39■□□□□ 0.53
DDX41-201ENST00000330503 EXTL3O43909 919 aa18.39■□□□□ 0.53
DDX41-201ENST00000330503 TACC1O75410 805 aa18.39■□□□□ 0.53
DDX41-201ENST00000330503 GRB14Q14449 540 aa18.39■□□□□ 0.53
DDX41-201ENST00000330503 RNF10Q8N5U6 811 aaKnown RBP18.39■□□□□ 0.53
DDX41-201ENST00000330503 TRIM58Q8NG06 486 aa18.39■□□□□ 0.53
DDX41-201ENST00000330503 PSPC1Q8WXF1 523 aaKnown RBP18.39■□□□□ 0.53
DDX41-201ENST00000330503 UBXN4Q92575 508 aa18.39■□□□□ 0.53
DDX41-201ENST00000330503 PARK7Q99497 189 aaKnown RBP18.39■□□□□ 0.53
DDX41-201ENST00000330503 TARS2Q9BW92 718 aaKnown RBP18.39■□□□□ 0.53
DDX41-201ENST00000330503 SUGCTQ9HAC7 445 aa18.39■□□□□ 0.53
DDX41-201ENST00000330503 TMEM8AQ9HCN3 771 aa18.39■□□□□ 0.53
DDX41-201ENST00000330503 ZNF233A6NK53 670 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 RFX1P22670 979 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 GTF2H1P32780 548 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 ENPEPQ07075 957 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 LAMC2Q13753 1193 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 WHAMMP3Q1A5X7 153 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 C10orf76Q5T2E6 689 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 KRT39Q6A163 491 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 CRELD2Q6UXH1 353 aaPredicted RBP18.38■□□□□ 0.53
DDX41-201ENST00000330503 DNAAF5Q86Y56 855 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 LNX1Q8TBB1 728 aaPredicted RBP18.38■□□□□ 0.53
DDX41-201ENST00000330503 TRAPPC12Q8WVT3 735 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 PUF60Q9UHX1 559 aaKnown RBP18.38■□□□□ 0.53
DDX41-201ENST00000330503 IVNS1ABPQ9Y6Y0 642 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 ANO9A1A5B4 782 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 KLRC1P26715 233 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 SLC26A2P50443 739 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 LAMTOR4Q0VGL1 99 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 KIAA0753Q2KHM9 967 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 ALKBH5Q6P6C2 394 aaKnown RBP18.38■□□□□ 0.53
DDX41-201ENST00000330503 LRRC71Q8N4P6 559 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 CEP112Q8N8E3 955 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 ZNF516Q92618 1163 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 KAT5Q92993 513 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 RNPEPQ9H4A4 650 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 KIAA1586Q9HCI6 787 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 LUC7LQ9NQ29 371 aaKnown RBP18.38■□□□□ 0.53
DDX41-201ENST00000330503 AGO2Q9UKV8 859 aaKnown RBP18.38■□□□□ 0.53
DDX41-201ENST00000330503 SAR1BQ9Y6B6 198 aa18.38■□□□□ 0.53
DDX41-201ENST00000330503 TTLL13PA6NNM8 815 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 BUB1O43683 1085 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 SRGAP2O75044 1071 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 WNT7BP56706 349 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 NLRP11P59045 1033 aaKnown RBP18.37■□□□□ 0.53
DDX41-201ENST00000330503 KIF22Q14807 665 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 FAM110CQ1W6H9 321 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 PLEKHH3Q7Z736 793 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 DPP9Q86TI2 863 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 TCP11Q8WWU5 503 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 FAM84AQ96KN4 292 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.37■□□□□ 0.533e-7■■■■■ 208.8
DDX41-201ENST00000330503 JRKLQ9Y4A0 524 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 MYH10P35580 1976 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 A0A0B4J269 797 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.37■□□□□ 0.53
DDX41-201ENST00000330503 TULP1O00294 542 aaPredicted RBP18.37■□□□□ 0.53
DDX41-201ENST00000330503 HBP1O60381 514 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 GH1P01241 217 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 ADCYAP1R1P41586 468 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 GPC3P51654 580 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 HUNKP57058 714 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 CLDN10P78369 228 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 BMS1Q14692 1282 aaKnown RBP18.37■□□□□ 0.53
DDX41-201ENST00000330503 SLFN12LQ6IEE8 588 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 SV2AQ7L0J3 742 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 TAS1R2Q8TE23 839 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 MAML3Q96JK9 1138 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 KREMEN1Q96MU8 473 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 NOX5Q96PH1 765 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 CCDC113Q9H0I3 377 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 EPC1Q9H2F5 836 aa18.37■□□□□ 0.53
DDX41-201ENST00000330503 BTNL10A8MVZ5 291 aa18.36■□□□□ 0.53
DDX41-201ENST00000330503 GAS2O43903 313 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms