RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 GARTP22102 1010 aa20.04■□□□□ 0.8
USP39-201ENST00000323701 NLRP11P59045 1033 aaKnown RBP20.04■□□□□ 0.8
USP39-201ENST00000323701 MCCD1P59942 119 aaPredicted RBP20.04■□□□□ 0.8
USP39-201ENST00000323701 IQSEC1Q6DN90 963 aa20.04■□□□□ 0.8
USP39-201ENST00000323701 CRELD2Q6UXH1 353 aaPredicted RBP20.04■□□□□ 0.8
USP39-201ENST00000323701 PAXIP1Q6ZW49 1069 aaPredicted RBP20.04■□□□□ 0.8
USP39-201ENST00000323701 CCDC42Q96M95 316 aa20.04■□□□□ 0.8
USP39-201ENST00000323701 MFSD14AQ96MC6 490 aa20.04■□□□□ 0.8
USP39-201ENST00000323701 TUT1Q9H6E5 874 aaKnown RBP20.04■□□□□ 0.8
USP39-201ENST00000323701 GNEQ9Y223 722 aaKnown RBP20.04■□□□□ 0.8
USP39-201ENST00000323701 PPME1Q9Y570 386 aa20.04■□□□□ 0.8
USP39-201ENST00000323701 EIF3CLB5ME19 914 aaKnown RBP20.03■□□□□ 0.8
USP39-201ENST00000323701 DYNC1LI2O43237 492 aaPredicted RBP20.03■□□□□ 0.8
USP39-201ENST00000323701 MSCO60682 206 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 IGHA2P01877 340 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 HOXD8P13378 290 aaPredicted RBP20.03■□□□□ 0.8
USP39-201ENST00000323701 ACOT2P49753 483 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 KIF11P52732 1056 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 JAM2P57087 298 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 GNG11P61952 73 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 CYP24A1Q07973 514 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 SREBF2Q12772 1141 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 SEZ6Q53EL9 994 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 CDCA2Q69YH5 1023 aaPredicted RBP20.03■□□□□ 0.8
USP39-201ENST00000323701 PHLDB3Q6NSJ2 640 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 IRF2BP2Q7Z5L9 587 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 CCDC170Q8IYT3 715 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 GPD1LQ8N335 351 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 MSL3Q8N5Y2 521 aaKnown RBP20.03■□□□□ 0.8
USP39-201ENST00000323701 PPP1R16BQ96T49 567 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 EIF3CQ99613 913 aaKnown RBP20.03■□□□□ 0.8
USP39-201ENST00000323701 MINDY3Q9H8M7 445 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 SLC5A4Q9NY91 659 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 AIPL1Q9NZN9 384 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 ANKFY1Q9P2R3 1169 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 DUSP10Q9Y6W6 482 aa20.03■□□□□ 0.8
USP39-201ENST00000323701 GOLGA6L9A6NEM1 432 aa20.02■□□□□ 0.8
USP39-201ENST00000323701 TNPO2O14787 897 aaKnown RBP20.02■□□□□ 0.8
USP39-201ENST00000323701 PIGRP01833 764 aa20.02■□□□□ 0.8
USP39-201ENST00000323701 KLRC1P26715 233 aa20.02■□□□□ 0.8
USP39-201ENST00000323701 KIF18AQ8NI77 898 aa20.02■□□□□ 0.8
USP39-201ENST00000323701 SYN2Q92777 582 aaPredicted RBP20.02■□□□□ 0.8
USP39-201ENST00000323701 TMEM134Q9H6X4 195 aa20.02■□□□□ 0.8
USP39-201ENST00000323701 CSDE1O75534 798 aaKnown RBP20.02■□□□□ 0.8
USP39-201ENST00000323701 IQCF3P0C7M6 154 aa20.02■□□□□ 0.8
USP39-201ENST00000323701 MAP2K1Q02750 393 aaPredicted RBP20.02■□□□□ 0.8
USP39-201ENST00000323701 GFPT1Q06210 699 aaPredicted RBP20.02■□□□□ 0.8
USP39-201ENST00000323701 EPC2Q52LR7 807 aa20.02■□□□□ 0.8
USP39-201ENST00000323701 SEMA4DQ92854 862 aa20.02■□□□□ 0.8
USP39-201ENST00000323701 PRIMPOLQ96LW4 560 aa20.02■□□□□ 0.8
USP39-201ENST00000323701 NLRP4Q96MN2 994 aa20.02■□□□□ 0.8
USP39-201ENST00000323701 GPR88Q9GZN0 384 aa20.02■□□□□ 0.8
USP39-201ENST00000323701 PHLPP2Q6ZVD8 1323 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 KIF2AO00139 706 aaPredicted RBP20.01■□□□□ 0.79
USP39-201ENST00000323701 AOC2O75106 756 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 CYLC1P35663 651 aaPredicted RBP20.01■□□□□ 0.79
USP39-201ENST00000323701 TDRD12Q587J7 1177 aaKnown RBP20.01■□□□□ 0.79
USP39-201ENST00000323701 MARCH8Q5T0T0 291 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 LINC01465Q8N7H1 131 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 TCP11Q8WWU5 503 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 KCNG1Q9UIX4 513 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 FBXL5Q9UKA1 691 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 CA12O43570 354 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 DLATP10515 647 aaKnown RBP20.01■□□□□ 0.79
USP39-201ENST00000323701 MXD4Q14582 209 aaPredicted RBP20.01■□□□□ 0.79
USP39-201ENST00000323701 LMBRD2Q68DH5 695 aaPredicted RBP20.01■□□□□ 0.79
USP39-201ENST00000323701 ARHGEF19Q8IW93 802 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 EHBP1Q8NDI1 1231 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 TSC1Q92574 1164 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 ZNF516Q92618 1163 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 SPAG5Q96R06 1193 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 PDCL3Q9H2J4 239 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 HAUS4Q9H6D7 363 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 DNAJC12Q9UKB3 198 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 AGO2Q9UKV8 859 aaKnown RBP20.01■□□□□ 0.79
USP39-201ENST00000323701 PAXBP1Q9Y5B6 917 aa20.01■□□□□ 0.79
USP39-201ENST00000323701 PTPRJQ12913 1337 aa20■□□□□ 0.79
USP39-201ENST00000323701 A0A0B4J269 797 aa20■□□□□ 0.79
USP39-201ENST00000323701 B4GALT5O43286 388 aa20■□□□□ 0.79
USP39-201ENST00000323701 GAS2O43903 313 aaKnown RBP20■□□□□ 0.79
USP39-201ENST00000323701 SERPING1P05155 500 aa20■□□□□ 0.79
USP39-201ENST00000323701 MAPK8IP2Q13387 824 aaPredicted RBP20■□□□□ 0.79
USP39-201ENST00000323701 ARHGAP29Q52LW3 1261 aa20■□□□□ 0.79
USP39-201ENST00000323701 ZNF484Q5JVG2 852 aa20■□□□□ 0.79
USP39-201ENST00000323701 NUCKS1Q9H1E3 243 aaKnown RBP20■□□□□ 0.79
USP39-201ENST00000323701 APEX2Q9UBZ4 518 aa20■□□□□ 0.79
USP39-201ENST00000323701 EXTL3O43909 919 aa20■□□□□ 0.79
USP39-201ENST00000323701 LCA5LO95447 670 aa20■□□□□ 0.79
USP39-201ENST00000323701 RGS2P41220 211 aa20■□□□□ 0.79
USP39-201ENST00000323701 MXI1P50539 228 aa20■□□□□ 0.79
USP39-201ENST00000323701 CHMP4BP1P59074 171 aa20■□□□□ 0.79
USP39-201ENST00000323701 PTK2Q05397 1052 aa20■□□□□ 0.79
USP39-201ENST00000323701 DGKDQ16760 1214 aa20■□□□□ 0.79
USP39-201ENST00000323701 CDR2LQ86X02 465 aaPredicted RBP20■□□□□ 0.79
USP39-201ENST00000323701 MYRIPQ8NFW9 859 aa20■□□□□ 0.79
USP39-201ENST00000323701 KAT5Q92993 513 aa20■□□□□ 0.79
USP39-201ENST00000323701 IFT122Q9HBG6 1241 aa20■□□□□ 0.79
USP39-201ENST00000323701 GUCA1BQ9UMX6 200 aa20■□□□□ 0.79
USP39-201ENST00000323701 GABRQQ9UN88 632 aa20■□□□□ 0.79
USP39-201ENST00000323701 A6NJR5 290 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms