RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 CDH6P55285 790 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 CENPUQ71F23 418 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 FMR1NBQ8N0W7 255 aaPredicted RBP9.39□□□□□ -0.91
SSBP2-201ENST00000320672 ICA1LQ8NDH6 482 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 CFAP43Q8NDM7 1665 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 LINC00854A0A1B0GVQ3 168 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 EIF3CLB5ME19 914 aaKnown RBP9.39□□□□□ -0.91
SSBP2-201ENST00000320672 GYG2O15488 501 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 ZRANB2O95218 330 aaKnown RBP eCLIP9.39□□□□□ -0.91
SSBP2-201ENST00000320672 BPIFB4P59827 614 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 NBPF9Q3BBW0 867 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 LDHDQ86WU2 507 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 HSPBP1Q9NZL4 362 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 DDHD2O94830 711 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 ARHGDIAP52565 204 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 HVCN1Q96D96 273 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 TMEM60Q9H2L4 133 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 VCX3AQ9NNX9 186 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 FBXO28Q9NVF7 368 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 STRIP2Q9ULQ0 834 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 MDM1Q8TC05 714 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 ZFP69BQ9UJL9 534 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 HNRNPCL2B2RXH8 293 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 DPYSL4O14531 572 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 HNRNPCL1O60812 293 aaKnown RBP9.39□□□□□ -0.91
SSBP2-201ENST00000320672 HUS1O60921 280 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 SULT1E1P49888 294 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 PRAMEP78395 509 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 KRT17Q04695 432 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 MB21D2Q8IYB1 491 aaPredicted RBP9.39□□□□□ -0.91
SSBP2-201ENST00000320672 INPP5DQ92835 1189 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 ZKSCAN4Q969J2 545 aaPredicted RBP9.39□□□□□ -0.91
SSBP2-201ENST00000320672 SEPT5Q99719 369 aaPredicted RBP9.39□□□□□ -0.91
SSBP2-201ENST00000320672 TMEM39BQ9GZU3 492 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 PIF1Q9H611 641 aa9.39□□□□□ -0.91
SSBP2-201ENST00000320672 IPO5O00410 1097 aaKnown RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 IKBKBO14920 756 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 TTI1O43156 1089 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 RNF219Q5W0B1 726 aaPredicted RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 LRRC8EQ6NSJ5 796 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 MICALL2Q8IY33 904 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 PBXIP1Q96AQ6 731 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 ASIC4Q96FT7 647 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 RBAKQ9NYW8 714 aaPredicted RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 JRKLQ9Y4A0 524 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 CYP19A1P11511 503 aaPredicted RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 ARSEP51690 589 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 BCAR1P56945 870 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 GPC5P78333 572 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 GALNT17Q6IS24 598 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 FAM180AQ6UWF9 173 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 LRRN4Q8WUT4 740 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 GPRC5CQ9NQ84 441 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 PNMA3Q9UL41 463 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 MYO3BQ8WXR4 1341 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 E5RI56 91 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 NPTXRO95502 500 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 OVGP1Q12889 678 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 WDR72Q3MJ13 1102 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 IZUMO3Q5VZ72 239 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 RBM41Q96IZ5 413 aaKnown RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 OSBPL9Q96SU4 736 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 CEP41Q9BYV8 373 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 PLA2R1Q13018 1463 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 LOC100653049A0A140TA62 436 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 KCNN4O15554 427 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 KRT34O76011 436 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 PLEKP08567 350 aaPredicted RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 TXNP10599 105 aaKnown RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 UNC13DQ70J99 1090 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 UTS2BQ765I0 119 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 PGBD3Q8N328 593 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 TMA16Q96EY4 203 aaKnown RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 XPOTO43592 962 aaKnown RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 TMEM179Q6ZVK1 233 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 GALNT4Q8N4A0 578 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 COA1Q9GZY4 146 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 MT-CO1P00395 513 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 GLE1Q53GS7 698 aaKnown RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 PSPC1Q8WXF1 523 aaKnown RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 PGBD4Q96DM1 585 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 CEP19Q96LK0 163 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 FHOD1Q9Y613 1164 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 DNMT1P26358 1616 aaKnown RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 MEFVO15553 781 aaPredicted RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 KCNA2P16389 499 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 RAP1GAPP47736 663 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 DMTNQ08495 405 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 KNOP1Q1ED39 458 aaKnown RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 ZC3H12BQ5HYM0 836 aaKnown RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 CC2D1AQ6P1N0 951 aaPredicted RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 PDIK1LQ8N165 341 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 C2orf69Q8N8R5 385 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 PPHLN1Q8NEY8 458 aaKnown RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 ULK4Q96C45 1275 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 FAM81BQ96LP2 452 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 POP1Q99575 1024 aaKnown RBP9.38□□□□□ -0.91
SSBP2-201ENST00000320672 SP110Q9HB58 689 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 STK17AQ9UEE5 414 aa9.38□□□□□ -0.91
SSBP2-201ENST00000320672 ADAM21Q9UKJ8 722 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms