RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 UBXN4Q92575 508 aa24.69■■□□□ 1.54
VSTM4-201ENST00000298454 TARS2Q9BW92 718 aaKnown RBP24.69■■□□□ 1.54
VSTM4-201ENST00000298454 KATNBL1Q9H079 304 aa24.69■■□□□ 1.54
VSTM4-201ENST00000298454 VTA1Q9NP79 307 aa24.69■■□□□ 1.54
VSTM4-201ENST00000298454 PUF60Q9UHX1 559 aaKnown RBP24.69■■□□□ 1.54
VSTM4-201ENST00000298454 TRPC6Q9Y210 931 aa24.69■■□□□ 1.54
VSTM4-201ENST00000298454 PPME1Q9Y570 386 aa24.69■■□□□ 1.54
VSTM4-201ENST00000298454 PLXNA1Q9UIW2 1896 aa24.69■■□□□ 1.54
VSTM4-201ENST00000298454 PMM2O15305 246 aa24.69■■□□□ 1.54
VSTM4-201ENST00000298454 ADCY3O60266 1144 aa24.69■■□□□ 1.54
VSTM4-201ENST00000298454 SNAI1O95863 264 aaPredicted RBP24.69■■□□□ 1.54
VSTM4-201ENST00000298454 ADCYAP1R1P41586 468 aa24.69■■□□□ 1.54
VSTM4-201ENST00000298454 TUBB2AQ13885 445 aa24.69■■□□□ 1.54
VSTM4-201ENST00000298454 GRB14Q14449 540 aa24.69■■□□□ 1.54
VSTM4-201ENST00000298454 FAM110CQ1W6H9 321 aa24.69■■□□□ 1.54
VSTM4-201ENST00000298454 TUBB2BQ9BVA1 445 aa24.69■■□□□ 1.54
VSTM4-201ENST00000298454 LUC7LQ9NQ29 371 aaKnown RBP24.69■■□□□ 1.54
VSTM4-201ENST00000298454 STYXL1Q9Y6J8 313 aa24.69■■□□□ 1.54
VSTM4-201ENST00000298454 BUB1O43683 1085 aa24.68■■□□□ 1.54
VSTM4-201ENST00000298454 ECM2O94769 699 aaPredicted RBP24.68■■□□□ 1.54
VSTM4-201ENST00000298454 PIGRP01833 764 aa24.68■■□□□ 1.54
VSTM4-201ENST00000298454 DLATP10515 647 aaKnown RBP24.68■■□□□ 1.54
VSTM4-201ENST00000298454 KRT39Q6A163 491 aa24.68■■□□□ 1.54
VSTM4-201ENST00000298454 TRAPPC11Q7Z392 1133 aa24.68■■□□□ 1.54
VSTM4-201ENST00000298454 ZNF467Q7Z7K2 595 aaPredicted RBP24.68■■□□□ 1.54
VSTM4-201ENST00000298454 DNAAF5Q86Y56 855 aa24.68■■□□□ 1.54
VSTM4-201ENST00000298454 TXLNBQ8N3L3 684 aa24.68■■□□□ 1.54
VSTM4-201ENST00000298454 TRIM58Q8NG06 486 aa24.68■■□□□ 1.54
VSTM4-201ENST00000298454 SEMA4DQ92854 862 aa24.68■■□□□ 1.54
VSTM4-201ENST00000298454 ZBTB10Q96DT7 871 aa24.68■■□□□ 1.54
VSTM4-201ENST00000298454 NAGPAQ9UK23 515 aa24.68■■□□□ 1.54
VSTM4-201ENST00000298454 ZNF233A6NK53 670 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 FOXN3O00409 490 aaPredicted RBP24.67■■□□□ 1.54
VSTM4-201ENST00000298454 EXTL3O43909 919 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 TACC1O75410 805 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 SCP2P22307 547 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 KIAA0753Q2KHM9 967 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 IER5Q5VY09 327 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 PAPD7Q5XG87 772 aaKnown RBP24.67■■□□□ 1.54
VSTM4-201ENST00000298454 RNPEPQ9H4A4 650 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 TMEM134Q9H6X4 195 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 TMEM8AQ9HCN3 771 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 IGKV6-21A0A0C4DH24 114 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 RFX1P22670 979 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 SLC26A2P50443 739 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 NLRP11P59045 1033 aaKnown RBP24.67■■□□□ 1.54
VSTM4-201ENST00000298454 LAMC2Q13753 1193 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 SRGAP1Q7Z6B7 1085 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 MAML3Q96JK9 1138 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 FAM84AQ96KN4 292 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 AGO2Q9UKV8 859 aaKnown RBP24.67■■□□□ 1.54
VSTM4-201ENST00000298454 DAAM1Q9Y4D1 1078 aa24.67■■□□□ 1.54
VSTM4-201ENST00000298454 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.66■■□□□ 1.54
VSTM4-201ENST00000298454 DDX3XO00571 662 aaKnown RBP eCLIP24.66■■□□□ 1.54
VSTM4-201ENST00000298454 SRGAP2O75044 1071 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 SRGAP2CP0DJJ0 459 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 KLRC1P26715 233 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 ACOT2P49753 483 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 LAMTOR4Q0VGL1 99 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 PLEKHH3Q7Z736 793 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 PSPC1Q8WXF1 523 aaKnown RBP24.66■■□□□ 1.54
VSTM4-201ENST00000298454 KAT5Q92993 513 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 ANKFY1Q9P2R3 1169 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 CPA4Q9UI42 421 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 RBM47A0AV96 593 aaKnown RBP24.66■■□□□ 1.54
VSTM4-201ENST00000298454 TTLL13PA6NNM8 815 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 GH1P01241 217 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 NAB2Q15742 525 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 ALKBH5Q6P6C2 394 aaKnown RBP24.66■■□□□ 1.54
VSTM4-201ENST00000298454 OLIG1Q8TAK6 271 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 TCP11Q8WWU5 503 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 ERAP1Q9NZ08 941 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 SAR1BQ9Y6B6 198 aa24.66■■□□□ 1.54
VSTM4-201ENST00000298454 SIP14410 1827 aa24.65■■□□□ 1.54
VSTM4-201ENST00000298454 HBP1O60381 514 aa24.65■■□□□ 1.54
VSTM4-201ENST00000298454 WNT7BP56706 349 aa24.65■■□□□ 1.54
VSTM4-201ENST00000298454 CRELD2Q6UXH1 353 aaPredicted RBP24.65■■□□□ 1.54
VSTM4-201ENST00000298454 SV2AQ7L0J3 742 aa24.65■■□□□ 1.54
VSTM4-201ENST00000298454 RSRC2Q7L4I2 434 aaKnown RBP24.65■■□□□ 1.54
VSTM4-201ENST00000298454 USP37Q86T82 979 aa24.65■■□□□ 1.54
VSTM4-201ENST00000298454 CEP112Q8N8E3 955 aa24.65■■□□□ 1.54
VSTM4-201ENST00000298454 LNX1Q8TBB1 728 aaPredicted RBP24.65■■□□□ 1.54
VSTM4-201ENST00000298454 TAS1R2Q8TE23 839 aa24.65■■□□□ 1.54
VSTM4-201ENST00000298454 KIAA1586Q9HCI6 787 aa24.65■■□□□ 1.54
VSTM4-201ENST00000298454 NENFQ9UMX5 172 aa24.65■■□□□ 1.54
VSTM4-201ENST00000298454 COQ4Q9Y3A0 265 aa24.65■■□□□ 1.54
VSTM4-201ENST00000298454 ANO9A1A5B4 782 aa24.64■■□□□ 1.54
VSTM4-201ENST00000298454 GAS2O43903 313 aaKnown RBP24.64■■□□□ 1.54
VSTM4-201ENST00000298454 GJB1P08034 283 aa24.64■■□□□ 1.54
VSTM4-201ENST00000298454 ANXA13P27216 316 aa24.64■■□□□ 1.54
VSTM4-201ENST00000298454 NAP1L1P55209 391 aaKnown RBP24.64■■□□□ 1.54
VSTM4-201ENST00000298454 WHAMMP3Q1A5X7 153 aa24.64■■□□□ 1.54
VSTM4-201ENST00000298454 ZBTB41Q5SVQ8 909 aa24.64■■□□□ 1.54
VSTM4-201ENST00000298454 SLFN12LQ6IEE8 588 aa24.64■■□□□ 1.54
VSTM4-201ENST00000298454 VPS36Q86VN1 386 aa24.64■■□□□ 1.54
VSTM4-201ENST00000298454 RNF10Q8N5U6 811 aaKnown RBP24.64■■□□□ 1.54
VSTM4-201ENST00000298454 RNF149Q8NC42 400 aa24.64■■□□□ 1.54
VSTM4-201ENST00000298454 NPLOC4Q8TAT6 608 aa24.64■■□□□ 1.54
VSTM4-201ENST00000298454 AFG1LQ8WV93 481 aa24.64■■□□□ 1.54
VSTM4-201ENST00000298454 NOX5Q96PH1 765 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms