RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 MTHFD1LQ6UB35 978 aa24.85■■□□□ 1.57
PTX3-201ENST00000295927 CCDC127Q96BQ5 260 aa24.85■■□□□ 1.57
PTX3-201ENST00000295927 ZNF668Q96K58 619 aaPredicted RBP24.85■■□□□ 1.57
PTX3-201ENST00000295927 KIAA1586Q9HCI6 787 aa24.85■■□□□ 1.57
PTX3-201ENST00000295927 CREBZFQ9NS37 354 aa24.85■■□□□ 1.57
PTX3-201ENST00000295927 ARHGAP20Q9P2F6 1191 aa24.85■■□□□ 1.57
PTX3-201ENST00000295927 FBXL5Q9UKA1 691 aa24.85■■□□□ 1.57
PTX3-201ENST00000295927 AGO2Q9UKV8 859 aaKnown RBP24.85■■□□□ 1.57
PTX3-201ENST00000295927 KIAA0391O15091 583 aaKnown RBP24.84■■□□□ 1.57
PTX3-201ENST00000295927 N4BP1O75113 896 aaKnown RBP24.84■■□□□ 1.57
PTX3-201ENST00000295927 PLEKP08567 350 aaPredicted RBP24.84■■□□□ 1.57
PTX3-201ENST00000295927 SFMBT2Q5VUG0 894 aa24.84■■□□□ 1.57
PTX3-201ENST00000295927 ZPBP2Q6X784 338 aa24.84■■□□□ 1.57
PTX3-201ENST00000295927 GPIHBP1Q8IV16 184 aa24.84■■□□□ 1.57
PTX3-201ENST00000295927 CCDC170Q8IYT3 715 aa24.84■■□□□ 1.57
PTX3-201ENST00000295927 TMC2Q8TDI7 906 aa24.84■■□□□ 1.57
PTX3-201ENST00000295927 INTS2Q9H0H0 1204 aaKnown RBP24.84■■□□□ 1.57
PTX3-201ENST00000295927 ZNF233A6NK53 670 aa24.84■■□□□ 1.57
PTX3-201ENST00000295927 TTLL13PA6NNM8 815 aa24.84■■□□□ 1.57
PTX3-201ENST00000295927 P4HA2O15460 535 aa24.84■■□□□ 1.57
PTX3-201ENST00000295927 PRKCBP05771 671 aa24.84■■□□□ 1.57
PTX3-201ENST00000295927 CYLC1P35663 651 aaPredicted RBP24.84■■□□□ 1.57
PTX3-201ENST00000295927 MAPK6Q16659 721 aa24.84■■□□□ 1.57
PTX3-201ENST00000295927 REM2Q8IYK8 340 aaPredicted RBP24.84■■□□□ 1.57
PTX3-201ENST00000295927 MRPL4Q9BYD3 311 aaKnown RBP24.84■■□□□ 1.57
PTX3-201ENST00000295927 AP5M1Q9H0R1 490 aa24.84■■□□□ 1.57
PTX3-201ENST00000295927 ANKFY1Q9P2R3 1169 aa24.84■■□□□ 1.57
PTX3-201ENST00000295927 Q9Y3F1 56 aa24.84■■□□□ 1.57
PTX3-201ENST00000295927 LRRIQ3A6PVS8 624 aaPredicted RBP24.83■■□□□ 1.57
PTX3-201ENST00000295927 TBC1D8O95759 1140 aa24.83■■□□□ 1.57
PTX3-201ENST00000295927 F2P00734 622 aa24.83■■□□□ 1.57
PTX3-201ENST00000295927 FLT3LGP49771 235 aa24.83■■□□□ 1.57
PTX3-201ENST00000295927 RAPGEF1Q13905 1077 aa24.83■■□□□ 1.57
PTX3-201ENST00000295927 MARCH8Q5T0T0 291 aa24.83■■□□□ 1.57
PTX3-201ENST00000295927 GJB7Q6PEY0 223 aa24.83■■□□□ 1.57
PTX3-201ENST00000295927 AJAP1Q9UKB5 411 aaPredicted RBP24.83■■□□□ 1.57
PTX3-201ENST00000295927 REXO2Q9Y3B8 237 aaKnown RBP24.83■■□□□ 1.57
PTX3-201ENST00000295927 A0A0B4J269 797 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 A0A0U1RQJ8 604 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 KIF2AO00139 706 aaPredicted RBP24.82■■□□□ 1.56
PTX3-201ENST00000295927 TULP1O00294 542 aaPredicted RBP24.82■■□□□ 1.56
PTX3-201ENST00000295927 TMOD1P28289 359 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 MATR3P43243 847 aaKnown RBP eCLIP24.82■■□□□ 1.56
PTX3-201ENST00000295927 NLRP11P59045 1033 aaKnown RBP24.82■■□□□ 1.56
PTX3-201ENST00000295927 PTENP60484 403 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 HGSNATQ68CP4 663 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 EHBP1Q8NDI1 1231 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 TRPV1Q8NER1 839 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 LMO3Q8TAP4 145 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 ATRIPQ8WXE1 791 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 KAT2BQ92831 832 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 CCDC42Q96M95 316 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 MSTO1Q9BUK6 570 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 TMEM117Q9H0C3 514 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 AIPL1Q9NZN9 384 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 CPT1AP50416 773 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 MXI1P50539 228 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 ENPEPQ07075 957 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 CETN1Q12798 172 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 IQCEQ6IPM2 695 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 USP37Q86T82 979 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 TRIB2Q92519 343 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 SPAG5Q96R06 1193 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 POP1Q99575 1024 aaKnown RBP24.82■■□□□ 1.56
PTX3-201ENST00000295927 ACO2Q99798 780 aaKnown RBP24.82■■□□□ 1.56
PTX3-201ENST00000295927 AKT3Q9Y243 479 aa24.82■■□□□ 1.56
PTX3-201ENST00000295927 R3HCC1Q9Y3T6 440 aaKnown RBP24.82■■□□□ 1.56
PTX3-201ENST00000295927 PMM2O15305 246 aa24.81■■□□□ 1.56
PTX3-201ENST00000295927 LDHAP00338 332 aaKnown RBP24.81■■□□□ 1.56
PTX3-201ENST00000295927 AKR1A1P14550 325 aa24.81■■□□□ 1.56
PTX3-201ENST00000295927 EIF4A3P38919 411 aaKnown RBP24.81■■□□□ 1.56
PTX3-201ENST00000295927 ACOT2P49753 483 aa24.81■■□□□ 1.56
PTX3-201ENST00000295927 APLP1P51693 650 aa24.81■■□□□ 1.56
PTX3-201ENST00000295927 CHMP4BP1P59074 171 aa24.81■■□□□ 1.56
PTX3-201ENST00000295927 EPC2Q52LR7 807 aa24.81■■□□□ 1.56
PTX3-201ENST00000295927 CRELD2Q6UXH1 353 aaPredicted RBP24.81■■□□□ 1.56
PTX3-201ENST00000295927 NFKBIZQ9BYH8 718 aa24.81■■□□□ 1.56
PTX3-201ENST00000295927 FZD8Q9H461 694 aa24.81■■□□□ 1.56
PTX3-201ENST00000295927 SETD4Q9NVD3 440 aa24.81■■□□□ 1.56
PTX3-201ENST00000295927 MYO6Q9UM54 1294 aa24.81■■□□□ 1.56
PTX3-201ENST00000295927 EIF3CLB5ME19 914 aaKnown RBP24.8■■□□□ 1.56
PTX3-201ENST00000295927 INO80B-WBP1J3KQ70 363 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 CLDN3O15551 220 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 SERPING1P05155 500 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 BEX3Q00994 111 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 CAP1Q01518 475 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 PRKCZQ05513 592 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 MBTD1Q05BQ5 628 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 POU5F1BQ06416 359 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 KIAA0753Q2KHM9 967 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 MFSD14CQ5VZR4 134 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 ZNF592Q92610 1267 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 EIF3CQ99613 913 aaKnown RBP24.8■■□□□ 1.56
PTX3-201ENST00000295927 INO80BQ9C086 356 aaPredicted RBP24.8■■□□□ 1.56
PTX3-201ENST00000295927 MINDY3Q9H8M7 445 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 IFT122Q9HBG6 1241 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 RRN3P2A6NIE6 340 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 TOM1L1O75674 476 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 VTNP04004 478 aa24.8■■□□□ 1.56
PTX3-201ENST00000295927 JAM2P57087 298 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms