RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 KIAA1024Q9UPX6 916 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 USP20Q9Y2K6 914 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 HES2Q9Y543 173 aa10.84□□□□□ -0.67
CCDC58-201ENST00000291458 E9PMD0 336 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 TBX10O75333 385 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 POMCP01189 267 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 BMP1P13497 986 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 RPA1P27694 616 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 ARL2P36404 184 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 RAB27AP51159 221 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 PTENP60484 403 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 DLX2Q07687 328 aaPredicted RBP10.83□□□□□ -0.68
CCDC58-201ENST00000291458 RAD51AP2Q09MP3 1159 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 MXD4Q14582 209 aaPredicted RBP10.83□□□□□ -0.68
CCDC58-201ENST00000291458 IL17AQ16552 155 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 UBXN11Q5T124 520 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 PTCRAQ6ISU1 281 aaPredicted RBP10.83□□□□□ -0.68
CCDC58-201ENST00000291458 LLGL2Q6P1M3 1020 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 KCNT2Q6UVM3 1135 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 ZBTB8OSQ8IWT0 167 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 URGCPQ8TCY9 931 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 TCF25Q9BQ70 676 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 MRPL9Q9BYD2 267 aaKnown RBP10.83□□□□□ -0.68
CCDC58-201ENST00000291458 RAB34Q9BZG1 259 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 TRIM6Q9C030 488 aaPredicted RBP10.83□□□□□ -0.68
CCDC58-201ENST00000291458 NXF3Q9H4D5 531 aaKnown RBP10.83□□□□□ -0.68
CCDC58-201ENST00000291458 RSAD1Q9HA92 442 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.83□□□□□ -0.68
CCDC58-201ENST00000291458 CHST12Q9NRB3 414 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 TBC1D13Q9NVG8 400 aa10.83□□□□□ -0.68
CCDC58-201ENST00000291458 DBR1Q9UK59 544 aaKnown RBP10.83□□□□□ -0.68
CCDC58-201ENST00000291458 BARX2Q9UMQ3 279 aaPredicted RBP10.83□□□□□ -0.68
CCDC58-201ENST00000291458 MYH15Q9Y2K3 1946 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 TNFRSF10AO00220 468 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 ASAP2O43150 1006 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 B4GALT3O60512 393 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 SKIP12755 728 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 ITGA4P13612 1032 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 ARF4P18085 180 aaPredicted RBP10.82□□□□□ -0.68
CCDC58-201ENST00000291458 HOXA11P31270 313 aaPredicted RBP10.82□□□□□ -0.68
CCDC58-201ENST00000291458 SSTR3P32745 418 aaPredicted RBP10.82□□□□□ -0.68
CCDC58-201ENST00000291458 MLH1P40692 756 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 AFF1P51825 1210 aaKnown RBP10.82□□□□□ -0.68
CCDC58-201ENST00000291458 BCAR1P56945 870 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 ERVFC1P60507 584 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 RILPL1Q5EBL4 403 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 NOMO2Q5JPE7 1267 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 KRT79Q5XKE5 535 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 NOTUMQ6P988 496 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 DTHD1Q6ZMT9 781 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 AGMOQ6ZNB7 445 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 TMEM173Q86WV6 379 aaPredicted RBP10.82□□□□□ -0.68
CCDC58-201ENST00000291458 MCPH1Q8NEM0 835 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.82□□□□□ -0.68
CCDC58-201ENST00000291458 DEPTORQ8TB45 409 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 AUTS2Q8WXX7 1259 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 TATDN2Q93075 761 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 PPP2R3CQ969Q6 453 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 PGBD4Q96DM1 585 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 PABPC5Q96DU9 382 aaKnown RBP10.82□□□□□ -0.68
CCDC58-201ENST00000291458 RUSC1Q9BVN2 902 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 APOL5Q9BWW9 433 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 SPG21Q9NZD8 308 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 DNAJB4Q9UDY4 337 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 IPPQ9Y573 584 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 REV3LO60673 3130 aa10.82□□□□□ -0.68
CCDC58-201ENST00000291458 TRANK1O15050 2925 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 OFD1O75665 1012 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 EOMESO95936 686 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 PRKCBP05771 671 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 FECHP22830 423 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 AKAP5P24588 427 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 PPM1AP35813 382 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 SLC11A1P49279 550 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 ALDH7A1P49419 539 aaKnown RBP10.81□□□□□ -0.68
CCDC58-201ENST00000291458 SCNN1GP51170 649 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 ATP2C1P98194 919 aaPredicted RBP10.81□□□□□ -0.68
CCDC58-201ENST00000291458 CEBPZQ03701 1054 aaKnown RBP10.81□□□□□ -0.68
CCDC58-201ENST00000291458 NCBP1Q09161 790 aaKnown RBP10.81□□□□□ -0.68
CCDC58-201ENST00000291458 LEXMQ3ZCV2 418 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 NAALADL2Q58DX5 795 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 FOXD4L5Q5VV16 416 aaPredicted RBP10.81□□□□□ -0.68
CCDC58-201ENST00000291458 TMC7Q7Z402 723 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 KCNK18Q7Z418 384 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 ZNF280BQ86YH2 543 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 SLC39A11Q8N1S5 342 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 IGSF22Q8N9C0 903 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 SMG8Q8ND04 991 aaKnown RBP10.81□□□□□ -0.68
CCDC58-201ENST00000291458 RASSF8Q8NHQ8 419 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 BCL7CQ8WUZ0 217 aaPredicted RBP10.81□□□□□ -0.68
CCDC58-201ENST00000291458 FOXD4L4Q8WXT5 416 aaPredicted RBP10.81□□□□□ -0.68
CCDC58-201ENST00000291458 MRPS27Q92552 414 aaKnown RBP10.81□□□□□ -0.68
CCDC58-201ENST00000291458 TMEM169Q96HH4 297 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 CDK5RAP3Q96JB5 506 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 ZFP42Q96MM3 310 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 FAM193BQ96PV7 902 aaPredicted RBP10.81□□□□□ -0.68
CCDC58-201ENST00000291458 NRDE2Q9H7Z3 1164 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 TLE6Q9H808 572 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 KLK14Q9P0G3 267 aa10.81□□□□□ -0.68
CCDC58-201ENST00000291458 PARP2Q9UGN5 583 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms