RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 TRABDQ9H4I3 376 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 LRRIQ3A6PVS8 624 aaPredicted RBP16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 ZNF699Q32M78 642 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 CC2D2BQ6DHV5 1058 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 CYFIP1Q7L576 1253 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 ALKBH8Q96BT7 664 aaKnown RBP16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 DHX36Q9H2U1 1008 aaKnown RBP16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 TULP4Q9NRJ4 1543 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 MYBP10242 640 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 GJB7Q6PEY0 223 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 ICA1LQ8NDH6 482 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 FAM193BQ96PV7 902 aaPredicted RBP16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 LXNQ9BS40 222 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 UBN1Q9NPG3 1134 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 KLHL8Q9P2G9 620 aaPredicted RBP16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 TRPC5Q9UL62 973 aaPredicted RBP16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 MUM1L1Q5H9M0 696 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 CCNYL1Q8N7R7 359 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 XPO6Q96QU8 1125 aaKnown RBP16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 UNC13BO14795 1591 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 E2F8A0AVK6 867 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 PPP1R3GB7ZBB8 358 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 PSMD14O00487 310 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 GALCP54803 685 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 NR1H3Q13133 447 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 P3H1Q32P28 736 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 SMIM5Q71RC9 77 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 ZMAT2Q96NC0 199 aaKnown RBP16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 UTYO14607 1347 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 H3BQF6 201 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 M0QYV0 167 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 HOXA7P31268 230 aaPredicted RBP16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 PGM1P36871 562 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 TMEM154Q6P9G4 183 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 NOP9Q86U38 636 aaKnown RBP16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 ARL2BPQ9Y2Y0 163 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 DUSP10Q9Y6W6 482 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 MYMKA6NI61 221 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 CORO7P57737 925 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 QRICH1Q2TAL8 776 aa16.29■□□□□ 0.2
SHROOM4-201ENST00000289292 PPP1R12AO14974 1030 aaPredicted RBP16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 PHF2O75151 1096 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 KRT38O76015 456 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 CD44P16070 742 aaKnown RBP16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 CRKP46108 304 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 FSCBQ5H9T9 825 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 MXD3Q9BW11 206 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 ATP6V0A4Q9HBG4 840 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 MARCOQ9UEW3 520 aaPredicted RBP16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 IQSEC2Q5JU85 1478 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 PNPLA6Q8IY17 1366 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 MYO3AQ8NEV4 1616 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 SPDYE2BA6NHP3 402 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 SPDYE6P0CI01 402 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 ROR1Q01973 937 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 AP1B1Q10567 949 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 TAF1BQ53T94 588 aaPredicted RBP16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 LRIG3Q6UXM1 1119 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 ACAD11Q709F0 780 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 SEC24DO94855 1032 aaPredicted RBP16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 KCTD2Q14681 263 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 FBXL13Q8NEE6 735 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 ENGASEQ8NFI3 743 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 IP6K2Q9UHH9 426 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 TRAF3IP3Q9Y228 551 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 NBPF26B4DH59 902 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 ZNF667Q5HYK9 610 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 RNF135Q8IUD6 432 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 NBPF15Q8N660 670 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 C9orf72Q96LT7 481 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 WARS2Q9UGM6 360 aaKnown RBP16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 FRMD5Q7Z6J6 570 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 NCLNQ969V3 563 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 FUT8Q9BYC5 575 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 KIF9Q9HAQ2 790 aa16.28■□□□□ 0.2
SHROOM4-201ENST00000289292 POU5F1BQ06416 359 aa16.27■□□□□ 0.2
SHROOM4-201ENST00000289292 PTGISQ16647 500 aa16.27■□□□□ 0.2
SHROOM4-201ENST00000289292 CLEC10AQ8IUN9 316 aa16.27■□□□□ 0.2
SHROOM4-201ENST00000289292 CASKIN2Q8WXE0 1202 aa16.27■□□□□ 0.2
SHROOM4-201ENST00000289292 USP15Q9Y4E8 981 aaPredicted RBP16.27■□□□□ 0.2
SHROOM4-201ENST00000289292 REREQ9P2R6 1566 aa16.27■□□□□ 0.2
SHROOM4-201ENST00000289292 SLC9A1P19634 815 aa16.27■□□□□ 0.2
SHROOM4-201ENST00000289292 KPNA2P52292 529 aaKnown RBP16.27■□□□□ 0.2
SHROOM4-201ENST00000289292 PSMC1P62191 440 aaKnown RBP16.27■□□□□ 0.2
SHROOM4-201ENST00000289292 KLC3Q6P597 504 aa16.27■□□□□ 0.2
SHROOM4-201ENST00000289292 KRT27Q7Z3Y8 459 aa16.27■□□□□ 0.2
SHROOM4-201ENST00000289292 HPS5Q9UPZ3 1129 aa16.27■□□□□ 0.2
SHROOM4-201ENST00000289292 ZNF335Q9H4Z2 1342 aaPredicted RBP16.27■□□□□ 0.2
SHROOM4-201ENST00000289292 RNF17Q9BXT8 1623 aaKnown RBP16.27■□□□□ 0.2
SHROOM4-201ENST00000289292 STXBP3O00186 592 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 CEP152O94986 1710 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 AGTP01019 485 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 TMEM179Q6ZVK1 233 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 TMEM35BQ8NCS4 154 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 CNKSR1Q969H4 720 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 TRIM15Q9C019 465 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 ASNSD1Q9NWL6 643 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 E9PCH4 1651 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 RCAN1P53805 252 aa16.27■□□□□ 0.19
SHROOM4-201ENST00000289292 CYTH1Q15438 398 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms