RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 ZNF792Q3KQV3 632 aa16.61■□□□□ 0.25
SF3B4-201ENST00000271628 SPRYD7Q5W111 196 aa16.61■□□□□ 0.25
SF3B4-201ENST00000271628 PAPD7Q5XG87 772 aaKnown RBP16.61■□□□□ 0.25
SF3B4-201ENST00000271628 LMO3Q8TAP4 145 aa16.61■□□□□ 0.25
SF3B4-201ENST00000271628 PARD3BQ8TEW8 1205 aa16.61■□□□□ 0.25
SF3B4-201ENST00000271628 TCP11Q8WWU5 503 aa16.61■□□□□ 0.25
SF3B4-201ENST00000271628 MFSD14AQ96MC6 490 aa16.61■□□□□ 0.25
SF3B4-201ENST00000271628 JPH2Q9BR39 696 aaPredicted RBP16.61■□□□□ 0.25
SF3B4-201ENST00000271628 TMEM134Q9H6X4 195 aa16.61■□□□□ 0.25
SF3B4-201ENST00000271628 USP20Q9Y2K6 914 aa16.61■□□□□ 0.25
SF3B4-201ENST00000271628 DIS3Q9Y2L1 958 aaKnown RBP16.61■□□□□ 0.25
SF3B4-201ENST00000271628 JRKLQ9Y4A0 524 aa16.61■□□□□ 0.25
SF3B4-201ENST00000271628 GOLGA8IPA6NC78 632 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 GOLGA8JA6NMD2 632 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 F8VZ95 297 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 CELF2O95319 508 aaKnown RBP16.6■□□□□ 0.25
SF3B4-201ENST00000271628 ADORA2AP29274 412 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 GTF2H1P32780 548 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 CYP2C19P33261 490 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 AMPD2Q01433 879 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 DRAP1Q14919 205 aaPredicted RBP16.6■□□□□ 0.25
SF3B4-201ENST00000271628 LONRF2Q1L5Z9 754 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 IER5Q5VY09 327 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 SLFN12LQ6IEE8 588 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 SLC39A4Q6P5W5 647 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 GJB7Q6PEY0 223 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 ARMCX2Q7L311 632 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 ZNF571Q7Z3V5 609 aaPredicted RBP16.6■□□□□ 0.25
SF3B4-201ENST00000271628 ZNF467Q7Z7K2 595 aaPredicted RBP16.6■□□□□ 0.25
SF3B4-201ENST00000271628 CBWD2Q8IUF1 395 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 GPIHBP1Q8IV16 184 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 MSL3Q8N5Y2 521 aaKnown RBP16.6■□□□□ 0.25
SF3B4-201ENST00000271628 SAAL1Q96ER3 474 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 SMARCAD1Q9H4L7 1026 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 ANKZF1Q9H8Y5 726 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 PUF60Q9UHX1 559 aaKnown RBP16.6■□□□□ 0.25
SF3B4-201ENST00000271628 SAR1BQ9Y6B6 198 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 LRRIQ4A6NIV6 560 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 ERLIN1O75477 346 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 PIGRP01833 764 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 GCLMP48507 274 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 ENOX2Q16206 610 aaKnown RBP16.6■□□□□ 0.25
SF3B4-201ENST00000271628 EPC2Q52LR7 807 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 C1orf220Q5T0J3 134 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 KRT39Q6A163 491 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 PHLDB3Q6NSJ2 640 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 TAS1R3Q7RTX0 852 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 TRAPPC11Q7Z392 1133 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 ASAP3Q8TDY4 903 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 ATP8B4Q8TF62 1192 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 PARK7Q99497 189 aaKnown RBP16.6■□□□□ 0.25
SF3B4-201ENST00000271628 VTA1Q9NP79 307 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 STYXL1Q9Y6J8 313 aa16.6■□□□□ 0.25
SF3B4-201ENST00000271628 ATP8B3O60423 1300 aa16.59■□□□□ 0.25
SF3B4-201ENST00000271628 CTAGE15A4D2H0 777 aa16.59■□□□□ 0.25
SF3B4-201ENST00000271628 ZNF233A6NK53 670 aa16.59■□□□□ 0.25
SF3B4-201ENST00000271628 MAP2K7O14733 419 aa16.59■□□□□ 0.25
SF3B4-201ENST00000271628 LDHAP00338 332 aaKnown RBP16.59■□□□□ 0.25
SF3B4-201ENST00000271628 CTAGE8P0CG41 777 aa16.59■□□□□ 0.25
SF3B4-201ENST00000271628 MKRN3Q13064 507 aaKnown RBP16.59■□□□□ 0.25
SF3B4-201ENST00000271628 NAB2Q15742 525 aa16.59■□□□□ 0.25
SF3B4-201ENST00000271628 CTAGE6Q86UF2 777 aa16.59■□□□□ 0.25
SF3B4-201ENST00000271628 CTAGE4Q8IX94 777 aa16.59■□□□□ 0.25
SF3B4-201ENST00000271628 ZSWIM2Q8NEG5 633 aa16.59■□□□□ 0.25
SF3B4-201ENST00000271628 NOX5Q96PH1 765 aa16.59■□□□□ 0.25
SF3B4-201ENST00000271628 TMEM117Q9H0C3 514 aa16.59■□□□□ 0.25
SF3B4-201ENST00000271628 TMEM8AQ9HCN3 771 aa16.59■□□□□ 0.25
SF3B4-201ENST00000271628 AJAP1Q9UKB5 411 aaPredicted RBP16.59■□□□□ 0.25
SF3B4-201ENST00000271628 EVI5O60447 810 aa16.58■□□□□ 0.25
SF3B4-201ENST00000271628 ADRB2P07550 413 aa16.58■□□□□ 0.25
SF3B4-201ENST00000271628 EFNA5P52803 228 aa16.58■□□□□ 0.25
SF3B4-201ENST00000271628 LAMC2Q13753 1193 aa16.58■□□□□ 0.25
SF3B4-201ENST00000271628 MXD4Q14582 209 aaPredicted RBP16.58■□□□□ 0.25
SF3B4-201ENST00000271628 KIAA0753Q2KHM9 967 aa16.58■□□□□ 0.25
SF3B4-201ENST00000271628 PLEKHO2Q8TD55 490 aa16.58■□□□□ 0.25
SF3B4-201ENST00000271628 NAGPAQ9UK23 515 aa16.58■□□□□ 0.25
SF3B4-201ENST00000271628 COQ4Q9Y3A0 265 aa16.58■□□□□ 0.25
SF3B4-201ENST00000271628 PLXNA1Q9UIW2 1896 aa16.58■□□□□ 0.25
SF3B4-201ENST00000271628 PLXNB2O15031 1838 aa16.58■□□□□ 0.25
SF3B4-201ENST00000271628 MCM3APO60318 1980 aa16.58■□□□□ 0.24
SF3B4-201ENST00000271628 BTNL10A8MVZ5 291 aa16.58■□□□□ 0.24
SF3B4-201ENST00000271628 ENC1O14682 589 aa16.58■□□□□ 0.24
SF3B4-201ENST00000271628 EXTL3O43909 919 aa16.58■□□□□ 0.24
SF3B4-201ENST00000271628 ADCY3O60266 1144 aa16.58■□□□□ 0.24
SF3B4-201ENST00000271628 ATP1A1P05023 1023 aaKnown RBP16.58■□□□□ 0.24
SF3B4-201ENST00000271628 CYP24A1Q07973 514 aa16.58■□□□□ 0.24
SF3B4-201ENST00000271628 GPS2Q13227 327 aa16.58■□□□□ 0.24
SF3B4-201ENST00000271628 FAM110CQ1W6H9 321 aa16.58■□□□□ 0.24
SF3B4-201ENST00000271628 CCDC127Q96BQ5 260 aa16.58■□□□□ 0.24
SF3B4-201ENST00000271628 LRRIQ3A6PVS8 624 aaPredicted RBP16.57■□□□□ 0.24
SF3B4-201ENST00000271628 HBP1O60381 514 aa16.57■□□□□ 0.24
SF3B4-201ENST00000271628 PRLRP16471 622 aa16.57■□□□□ 0.24
SF3B4-201ENST00000271628 OAS2P29728 719 aaKnown RBP16.57■□□□□ 0.24
SF3B4-201ENST00000271628 ALKBH5Q6P6C2 394 aaKnown RBP16.57■□□□□ 0.24
SF3B4-201ENST00000271628 HDXQ7Z353 690 aa16.57■□□□□ 0.24
SF3B4-201ENST00000271628 PRPF31Q8WWY3 499 aaKnown RBP16.57■□□□□ 0.24
SF3B4-201ENST00000271628 FAM213AQ9BRX8 229 aa16.57■□□□□ 0.24
SF3B4-201ENST00000271628 GPR88Q9GZN0 384 aa16.57■□□□□ 0.24
SF3B4-201ENST00000271628 UBE2TQ9NPD8 197 aaPredicted RBP16.57■□□□□ 0.24
SF3B4-201ENST00000271628 PDGFCQ9NRA1 345 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms